Clone BS05049 Report

Search the DGRC for BS05049

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:50
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG2614-RA
Protein status:BS05049.pep: full length peptide match
Sequenced Size:2054

Clone Sequence Records

BS05049.3prime Sequence

837 bp (745 high quality bases) assembled on 2005-12-02

> BS05049.3prime
ATGGTCTAGAAAGCTTTTATATTTTCAACTCGCTGAGGAACTCTGCCACC
TCAAGGGCGTCTTCACTAGCCAGCTTTGTCTCCTTGACGGCACTGTTTAA
TCCTCGACCAGCGGTTCCCATGTTTTTCTTCCACTGCTCGACAGTTTTGT
ACTTTTCATCGTTGGCACAATATATTATCTCGTTGATGTCTTCCTCTAGT
TTGTAGCTGCACACAGCAGGAAAGACTTTGTGCAGATTGTTGAGAGCCTC
TGTGCGAAGGCTCTCATCGCGACACACGAGATTTAGCATAAAGAGACCTT
TCGGACCGATAATCTCCTTTATGTGCTGCAGGATCTTCGTAGCTAGGAAG
CTTTGGGGCGGACAACTCATTCCCAAACTGAGATCCTTGCTGTCTACATC
GAACAACACGGCATCGAAGTGGATATCTTCATTGCGACATCGCTCAACGA
AATCCAAGCCATCATCGATAACCACATGAAAGCGTTTGTCCTGCTTGAGC
TCAAAATACTGCTCAGCCACCTCCAACATTATAGGATCAATTTCGACGGC
CGTTATTCTAGCTTGCGGCAAAGCGGCGTGAAGAAAGCTGCACAGACCGC
CGCCTCCCAAGCCGACGACGAGAACATCCTTTTCCACATCTCTTTTGGGA
TGCTGCACCGTTGTGGCCAGTTGGACACCCACGGACATGTACAAATGATG
CTGGCAGGCTAGGTAGCCGAAGTCAATCTTCTTTCGATCCTTTTTGCCTT
TGATTTTGACTGTTTTAACTAAGGCTTCCGATTGCACAACAAACTGATTG
CTGAGAAAATAAGGCGTCGCAAGGTCTTGCCTTTGGC

BS05049.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:57:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG2614-PA 2022 CG2614-RA 1230..2022 809..17 3965 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:16:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG2614-RA 2246 CG2614-RA 1285..2106 837..17 4055 99.6 Minus
CG2614-RC 2234 CG2614-RC 1285..2094 837..17 3865 98.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 13:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20658667..20659078 428..17 2060 100 Minus
2L 23513712 2L 20658210..20658405 761..566 980 100 Minus
2L 23513712 2L 20658462..20658601 566..427 700 100 Minus
2L 23513712 2L 20658077..20658155 837..760 315 96.2 Minus
Blast to na_te.dros performed on 2015-02-06 13:16:13 has no hits.

BS05049.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:00:32 Download gff for BS05049.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2614-PA 1201..2022 17..837 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:25:43 Download gff for BS05049.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2614-PA 1201..2022 17..837 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:51:05 Download gff for BS05049.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2614-RA 1285..2111 10..837 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:58:14 Download gff for BS05049.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2614-RA 1285..2111 10..837 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:58:14 Download gff for BS05049.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 20658077..20658155 760..837 96 -> Minus
2L 20658212..20658404 567..759 100 -> Minus
2L 20658462..20658601 427..566 100 -> Minus
2L 20658669..20659080 14..426 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:51:05 Download gff for BS05049.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20658077..20658155 760..837 96 -> Minus
arm_2L 20658212..20658404 567..759 100 -> Minus
arm_2L 20658462..20658601 427..566 100 -> Minus
arm_2L 20658669..20659080 14..426 99 -> Minus

BS05049.5prime Sequence

836 bp (754 high quality bases) assembled on 2005-12-02

> BS05049.5prime
GAAGTTATCAGTCGACATGAATTTACTGCCCAAAACCCGCGAGGAGTTCG
CACAGACCGATTACTGGAACGAATTCTTCAAGAAGCGCGGTGAGAAGGCC
TTCGAATGGTACGGCGAATACCTGGAGTTGTGCGACCAGATCCACAAATA
CATCAAGCCGGCGGATAGGATTTTGATGCTGGGATGCGGTAACTCCAAAT
TGAGCATGGATATGTACGACACAGGATTTCGGGATATCACAAACATAGAT
ATATCTCCCATCGCTGTGAAGAAAATGCTGGAACTGAATGCCAAATCGCG
GCCGGAAATGAAGTTTCTGCAAATGGACGCGACAGCAATGACGTTCCCGG
ATGAAAGCTTTTCGGTGTCGTTGGACAAGGGAACGCTGGATGCTCTGTTT
GCCGACGACGAACCTGAAACGAGAGCGGTGGTGGAAAACTATTTCAAGGA
AATACTAAGAACCATGAGGAACGGTGGTCGCTATGTGGGTATCTCCCTGC
TGCAAGAGCACATCCTCAATTTCCTACTGGACTTCCTGCCCAAGCACAAT
TGCATGCTGAGGATTGTTCACTGCTTGGGGGTGGAACAGGCCAACAAAGA
GAAGAATGCCGATGATGCCTTGACGCTGCCTGTTTTCGTAGTCGTCGCTA
CTAAATTTAAGAGCCTTCCAATGCCAGTACTCGAATTTGGTTTCGGCAAC
GACAAGATGCAAAGATTCACCACGGTCTCCGAACTGAATAGCGCAGTTTC
ATCAGTCCAAAAGGCCGCTTTGGTTTGCAACGGTCTAGCCAGATCCCACA
TAGCTGGTCACAATGAGGTGATCATGGATCTGCACC

BS05049.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:57:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG2614-PA 2022 CG2614-RA 1..820 17..836 4075 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:10:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG2614-RC 2234 CG2614-RC 84..904 16..836 4090 99.9 Plus
CG2614-RA 2246 CG2614-RA 84..904 16..836 4090 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 12:10:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20656972..20657210 231..469 1195 100 Plus
2L 23513712 2L 20657262..20657477 463..678 1065 99.5 Plus
2L 23513712 2L 20657537..20657696 677..836 785 99.4 Plus
2L 23513712 2L 20656707..20656831 108..232 625 100 Plus
2L 23513712 2L 20656509..20656606 16..113 490 100 Plus
Blast to na_te.dros performed on 2015-02-02 12:10:27 has no hits.

BS05049.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:00:33 Download gff for BS05049.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2614-PA 1..820 17..836 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:25:44 Download gff for BS05049.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2614-PA 1..820 17..836 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 06:46:23 Download gff for BS05049.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2614-RA 84..904 16..836 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:53:16 Download gff for BS05049.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2614-RA 84..904 16..836 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:53:16 Download gff for BS05049.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 20656509..20656601 16..108 100 -> Plus
2L 20656708..20656830 109..231 100 -> Plus
2L 20656973..20657209 232..468 100 -> Plus
2L 20657268..20657475 469..676 100 -> Plus
2L 20657537..20657696 677..836 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 06:46:23 Download gff for BS05049.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20657268..20657475 469..676 100 -> Plus
arm_2L 20656509..20656601 16..108 100 -> Plus
arm_2L 20656708..20656830 109..231 100 -> Plus
arm_2L 20656973..20657209 232..468 100 -> Plus
arm_2L 20657537..20657696 677..836 99   Plus

BS05049.complete Sequence

2054 bp assembled on 2010-05-10

GenBank Submission: KX795716

> BS05049.complete
GAAGTTATCAGTCGACATGAATTTACTGCCCAAAACCCGCGAGGAGTTCG
CACAGACCGATTACTGGAACGAATTCTTCAAGAAGCGCGGTGAGAAGGCC
TTCGAATGGTACGGCGAATACCTGGAGTTGTGCGACCAGATCCACAAATA
CATCAAGCCGGCGGATAGGATTTTGATGCTGGGATGCGGTAACTCCAAAT
TGAGCATGGATATGTACGACACAGGATTTCGGGATATCACAAACATAGAT
ATATCTCCCATCGCTGTGAAGAAAATGCTGGAACTGAATGCCAAATCGCG
GCCGGAAATGAAGTTTCTGCAAATGGACGCGACAGCAATGACGTTCCCGG
ATGAAAGCTTTTCGGTGTCGTTGGACAAGGGAACGCTGGATGCTCTGTTT
GCCGACGACGAACCTGAAACGAGAGCGGTGGTGGAAAACTATTTCAAGGA
AATACTAAGAACCATGAGGAACGGTGGTCGCTATGTGGGTATCTCCCTGC
TGCAAGAGCACATCCTCAATTTCCTACTGGACTTCCTGCCCAAGCACAAT
TGCATGCTGAGGATTGTTCACTGCTTGGGGGTGGAACAGGCCAACAAAGA
GAAGAATGCCGATGATGCCTTGACGCTGCCTGTTTTCGTAGTCGTCGCTA
CTAAATTTAAGAGCCTTCCAATGCCAGTACTCGAATTTGGTTTCGGCAAC
GACAAGATGCAAAGATTCACCACGGTCTCCGAACTGAATAGCGCAGTTTC
ATCAGTCCAAAAGGCCGCTTTGGTTTGCAACGGTCTAGCCAGATCCAACA
TAGCTGGTCACAATGAGGTGATCATGGATCTGCACCGACCATCTGAGCAA
ACCCCTCGCTATACTATCCACATACTGGATAAGCCGCCAGCTCGCGGCCT
GGGCAAATACGCGGCGTTTATCGTTCCTCAGGGAAGAGAGGTGGAGTGGA
TTTTTTCCACGCCTGCGGGCCGGAAAAAGCTCCAGGACTCCGCCAACTTC
CAACGACTGGCTGTGGTTACCCTTCATAGAGATCAGGTTTACAGTACCTT
AGACGAAGTGAAGCAAGAGTTGGCCGACAGCATAAAGAACCTATCGCCAG
CTGGACTCACTGATCAGATACCGTATCTAAGTCTTGGATCCGATGTGGGC
AAAAGGGAGACTCTTATTTGTGGGTTCTCTAAGATATCTGGAGATTTCCG
CATCGAGGAAGTGGAGGCCAATGGCAAGACCCTGCGACGCCTTATTTTTC
TCAGCAATCAGTTTGTTGTGCAATCGGAAGCCTTAGTTAAAACAGTCAAA
ATCAAAGGCAAAAAGGATCGAAAGAAGATTGACTTCGGCTACCTAGCCTG
CCAGCATCATTTGTACATGTCCGTGGGTGTCCAACTGGCCACAACGGTGC
AGCATCCCAAAAGAGATGTGGAAAAGGATGTTCTCGTCGTCGGCTTGGGA
GGCGGCGGTCTGTGCAGCTTTCTTCACGCCGCTTTGCCGCAAGCTAGAAT
AACGGCCGTCGAAATTGATCCTATAATGTTGGAGGTGGCTGAGCAGTATT
TTGAGCTCAAGCAGGACAAACGCTTTCATGTGGTTATCGATGATGGCTTG
GATTTCGTTGAGCGATGTCGCAATGAAGATATCCACTTCGATGCCGTGTT
GTTCGATGTAGACAGCAAGGATCTCAGTTTGGGAATGAGTTGTCCGCCCC
AAAGCTTCCTAGCTACGAAGATCCTGCAGCACATAAAGGAGATTATCGGT
CCGAAAGGTCTCTTTATGCTAAATCTCGTGTGTCGCGATGAGAGCCTTCG
CACAGAGGCTCTCAACAATCTGCACAAAGTCTTTCCTGCTGTGTGCAGCT
ACAAACTAGAGGAAGACATCAACGAGATAATATATTGTGCCAACGATGAA
AAGTACAAAACTGTCGAGCAGTGGAAGAAAAACATGGGAACCGCTGGTCG
AGGATTAAACAGTGCCGTCAAGGAGACAAAGCTGGCTAGTGAAGACGCCC
TTGAGGTGGCAGAGTTCCTCAGCGAGTTGAAAATATAAAAGCTTTCTAGA
CCAT

BS05049.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:56:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG2614-RA 2022 CG2614-PA 1..2022 17..2038 10110 100 Plus
CG2614-RC 2010 CG2614-PC 1..2010 17..2038 9895 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:56:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG2614-RA 2246 CG2614-RA 84..2106 16..2038 10115 100 Plus
CG2614-RC 2234 CG2614-RC 84..2094 16..2038 9900 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:56:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20657537..20658155 677..1295 3095 100 Plus
2L 23513712 2L 20658667..20659078 1627..2038 2060 100 Plus
2L 23513712 2L 20656972..20657210 231..469 1195 100 Plus
2L 23513712 2L 20657262..20657477 463..678 1065 99.5 Plus
2L 23513712 2L 20658210..20658405 1294..1489 980 100 Plus
2L 23513712 2L 20658462..20658601 1489..1628 700 100 Plus
2L 23513712 2L 20656707..20656831 108..232 625 100 Plus
2L 23513712 2L 20656509..20656606 16..113 490 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:56:27 has no hits.

BS05049.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-10 11:55:41 Download gff for BS05049.complete
Subject Subject Range Query Range Percent Splice Strand
CG2614-RA 83..2095 17..2029 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:06:22 Download gff for BS05049.complete
Subject Subject Range Query Range Percent Splice Strand
CG2614-RA 85..2097 17..2029 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:52 Download gff for BS05049.complete
Subject Subject Range Query Range Percent Splice Strand
CG2614-RA 85..2097 17..2029 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:52 Download gff for BS05049.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20656510..20656601 17..108 100 -> Plus
2L 20656708..20656830 109..231 100 -> Plus
2L 20656973..20657209 232..468 100 -> Plus
2L 20657268..20657475 469..676 100 -> Plus
2L 20657537..20658155 677..1295 100 -> Plus
2L 20658212..20658404 1296..1488 100 -> Plus
2L 20658462..20658601 1489..1628 100 -> Plus
2L 20658669..20659069 1629..2029 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:06:22 Download gff for BS05049.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20656510..20656601 17..108 100 -> Plus
arm_2L 20656708..20656830 109..231 100 -> Plus
arm_2L 20656973..20657209 232..468 100 -> Plus
arm_2L 20657268..20657475 469..676 100 -> Plus
arm_2L 20657537..20658155 677..1295 100 -> Plus
arm_2L 20658212..20658404 1296..1488 100 -> Plus
arm_2L 20658462..20658601 1489..1628 100 -> Plus
arm_2L 20658669..20659069 1629..2029 100   Plus

BS05049.pep Sequence

Translation from 16 to 2037

> BS05049.pep
MNLLPKTREEFAQTDYWNEFFKKRGEKAFEWYGEYLELCDQIHKYIKPAD
RILMLGCGNSKLSMDMYDTGFRDITNIDISPIAVKKMLELNAKSRPEMKF
LQMDATAMTFPDESFSVSLDKGTLDALFADDEPETRAVVENYFKEILRTM
RNGGRYVGISLLQEHILNFLLDFLPKHNCMLRIVHCLGVEQANKEKNADD
ALTLPVFVVVATKFKSLPMPVLEFGFGNDKMQRFTTVSELNSAVSSVQKA
ALVCNGLARSNIAGHNEVIMDLHRPSEQTPRYTIHILDKPPARGLGKYAA
FIVPQGREVEWIFSTPAGRKKLQDSANFQRLAVVTLHRDQVYSTLDEVKQ
ELADSIKNLSPAGLTDQIPYLSLGSDVGKRETLICGFSKISGDFRIEEVE
ANGKTLRRLIFLSNQFVVQSEALVKTVKIKGKKDRKKIDFGYLACQHHLY
MSVGVQLATTVQHPKRDVEKDVLVVGLGGGGLCSFLHAALPQARITAVEI
DPIMLEVAEQYFELKQDKRFHVVIDDGLDFVERCRNEDIHFDAVLFDVDS
KDLSLGMSCPPQSFLATKILQHIKEIIGPKGLFMLNLVCRDESLRTEALN
NLHKVFPAVCSYKLEEDINEIIYCANDEKYKTVEQWKKNMGTAGRGLNSA
VKETKLASEDALEVAEFLSELKI*

BS05049.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG2614-PA 673 CG2614-PA 1..673 1..673 3475 100 Plus
CG2614-PC 669 CG2614-PC 1..669 1..673 3442 99.4 Plus