Clone BS05076 Report

Search the DGRC for BS05076

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:50
Well:76
Vector:pDNR-Dual
Associated Gene/TranscriptBtk29A-RB
Protein status:BS05076.pep: full length peptide match
Sequenced Size:2393

Clone Sequence Records

BS05076.3prime Sequence

830 bp (828 high quality bases) assembled on 2005-12-02

> BS05076.3prime
ATGGTCTAGAAAGCTTTTAGTCGGTTAGCGTTTGGGCCACAAGAGCCAGC
TGATCCATGAGCACACGGAAAGCGGGACGCTCCTCGGGTCCATGTGACCA
GCACAACTTCATGACATCATAAATCTCCTTGGCACACGACTTTGGTTTTT
CTAGGATAATTCCGCGCTGCACACGCTCCACAACCTCGGTATTCTTTAGG
CGACCGTATGGCATCTTGCCGCAAGTGAAGATCTCCCACATCAGCACACC
GTATGCCCACACATCGCTCTTAGAGGAGAAGCGCGTGTAGTTGAGCACTT
CGGGCGGGGCCCACTTGATGGGGAACTTGGTTCCGCCAGAGCTGGTATAC
TGATCGTCGAGAACGTATCGGGCCAATCCAAAGTCGGCCACTTTAACGAC
ATTCTCGGAACCCACGAGACAGTTGCGGGCAGCCAGATCCCGGTGAATGT
AGTTATGGCGCTCCAGGTAGGTCATTCCCTTGCTAACCTGTATGCACATG
TCAAGGAGTAGACCCATATTACCAATCAGGGTCTTCTCATGCCGTCGCAA
GTAATTCAACAAGGATCCGTGCTTCATGTACTCGGTCACAATGTAGATGG
GCCGGTGCTTGGAGCAGACGCCATATAGCTGCACAAGATTTGGATGCTGC
AGCTTGGTCATCACCTTGGCCTCCTCAATGAAATCGTCCTCGGACATGGT
TCCTTCCTTCATCATCTTGACCGCTGTGTCGATAGACCCACGCCACTTGC
CGCGCCGCACAACACCAAACTGTCCCGATCCAAGCTCCTCCATCAGCATC
AGTTCCATCGGATGGATCTCCCATTTGTCG

BS05076.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:57:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG8049-PC 1812 Btk29A-RC 999..1812 830..17 4070 100 Minus
CG8049-PB 2361 Btk29A-RB 1548..2361 830..17 4070 100 Minus
CG8049-PD 2361 Btk29A-RD 1548..2361 830..17 4070 100 Minus
CG8049-PA 1812 Btk29A-RA 999..1812 830..17 4070 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:15:16
Subject Length Description Subject Range Query Range Score Percent Strand
Btk29A-RH 3826 CG8049-RH 1980..2793 830..17 4070 100 Minus
Btk29A-RG 3302 CG8049-RG 1456..2269 830..17 4070 100 Minus
Btk29A-RE 4785 CG8049-RE 1807..2620 830..17 4070 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:15:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8260906..8261489 247..830 2920 100 Plus
2L 23513712 2L 8260696..8260832 114..250 685 100 Plus
2L 23513712 2L 8260538..8260636 17..115 495 100 Plus
Blast to na_te.dros performed on 2015-02-12 04:15:15 has no hits.

BS05076.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:01:26 Download gff for BS05076.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8049-PB 1548..2361 17..830 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:26:52 Download gff for BS05076.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8049-PA 999..1812 17..830 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:02:49 Download gff for BS05076.3prime
Subject Subject Range Query Range Percent Splice Strand
Btk29A-RE 1807..2625 13..830 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:59:54 Download gff for BS05076.3prime
Subject Subject Range Query Range Percent Splice Strand
Btk29A-RE 1807..2625 13..830 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:59:54 Download gff for BS05076.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 8260533..8260636 13..115 98 <- Plus
2L 8260698..8260831 116..249 100 <- Plus
2L 8260909..8261489 250..830 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:02:49 Download gff for BS05076.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8260533..8260636 13..115 98 <- Plus
arm_2L 8260698..8260831 116..249 100 <- Plus
arm_2L 8260909..8261489 250..830 100   Plus

BS05076.5prime Sequence

867 bp (831 high quality bases) assembled on 2005-12-02

> BS05076.5prime
GAAGTTATCAGTCGACATGATGGGCACTAAGCATCGAAACTCGCATGTCA
ATGGCAGCATTAAGTCATCATCATCGCTGCGATCGAGCAGCAAATCCTTT
CAAGCAAAAATGGATCTGATGTCCGAAAGGCTGTACGATGTCGTGAAAAG
TGGATCGATGGTGAAAAGGGCTCAAAACAAGAAGCGTTTCACCCCCGTGA
ATTACAAACATCGATGGTTTGAGTTGACCAAGCGAACTTTCAGCTACTTC
GATGTGGAAAATGTGGAGCGGAGACGCGAACGTGGTCGCATTCATTTGAA
GGGCGTTCGCCTGGTGGAGGAGGCGACGGTCAGTGGCGAGGGCGGCGATC
CCTTTGCACCGGATGGTTATCCGTTCCAAGTGGGCTACTGTGAGATCTCT
GCGTCGGCCAATTCGCATCAGCTGGAGAACGGCAACGGCGGTGGTAGTGG
CGTTGGAATCGAGGGTCAGCAGAGTGGACGAGCGGTGCCACAGTACACAC
TCTACGTGATCGCCAACAGCGAAAAGGAGCGCAGCGAGTGGATCCGCGCC
ATCCGCCAAGTTTGTGAGGATAGTAATACTCCAAAATCGTATCGCTATCA
TCCGGGCTTGTGGTCTGGAAAGAAGTGGAGCTGCTGCAAGGGATTATCTC
GAACCACATTTGGTTGCAGAGCAGCCGCCCATTGGCGTGAGGCCAACAAT
AATCCAAGCAACGGCAGTTCTCCAGCCCAGAATTCAACGCGCAGCATCAG
TCCCAACAGCTCCACGACCAACAGTCAGTTTAGCTTGCAGCACAACAGCT
CGGGGAGTCTCGGCGGAGGAGTGGGCGGCGGATTGGGAGGCGGAGGCAGC
CTTGGCCTANGCGGCGA

BS05076.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:57:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG8049-PB 2361 Btk29A-RB 1..850 17..866 4231 99.8 Plus
CG8049-PD 2361 Btk29A-RD 1..850 17..866 4231 99.8 Plus
CG8049-PC 1812 Btk29A-RC 143..301 708..866 776 99.3 Plus
CG8049-PA 1812 Btk29A-RA 143..301 708..866 776 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:25:33
Subject Length Description Subject Range Query Range Score Percent Strand
Btk29A-RE 4785 CG8049-RE 260..1109 17..866 4239 99.9 Plus
Btk29A-RD 3674 CG8049-RD 281..1130 17..866 4239 99.9 Plus
Btk29A-RB 3420 CG8049-RB 593..1442 17..866 4239 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:25:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8298071..8298322 268..17 1260 100 Minus
2L 23513712 2L 8283869..8284064 560..365 980 100 Minus
2L 23513712 2L 8262522..8262680 866..708 784 99.4 Minus
2L 23513712 2L 8283408..8283557 708..559 750 100 Minus
2L 23513712 2L 8284124..8284222 365..267 495 100 Minus
Blast to na_te.dros performed 2015-02-12 19:25:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6824..6934 694..809 109 65.9 Plus

BS05076.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:01:27 Download gff for BS05076.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8049-PB 1..850 17..866 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:26:54 Download gff for BS05076.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8049-PD 1..850 17..866 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:44:19 Download gff for BS05076.5prime
Subject Subject Range Query Range Percent Splice Strand
Btk29A-RB 580..1442 5..866 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 21:13:30 Download gff for BS05076.5prime
Subject Subject Range Query Range Percent Splice Strand
Btk29A-RB 580..1442 5..866 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 21:13:30 Download gff for BS05076.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8283409..8283555 561..707 100 <- Minus
2L 8298071..8298333 5..268 98   Minus
2L 8283869..8284064 365..560 100 <- Minus
2L 8284125..8284220 269..364 100 <- Minus
2L 8262522..8262680 708..866 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:44:19 Download gff for BS05076.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8262522..8262680 708..866 99 <- Minus
arm_2L 8283409..8283555 561..707 100 <- Minus
arm_2L 8283869..8284064 365..560 100 <- Minus
arm_2L 8284125..8284220 269..364 100 <- Minus
arm_2L 8298071..8298333 5..268 98   Minus

BS05076.complete Sequence

2393 bp assembled on 2009-12-07

GenBank Submission: KX795404

> BS05076.complete
GAAGTTATCAGTCGACATGATGGGCACTAAGCATCGAAACTCGCATGTCA
ATGGCAGCATTAAGTCATCATCATCGCTGCGATCGAGCAGCAAATCCTTT
CAAGCAAAAATGGATCTGATGTCCGAAAGGCTGTACGATGTCGTGAAAAG
TGGATCGATGGTGAAAAGGGCTCAAAACAAGAAGCGTTTCACCCCCGTGA
ATTACAAACATCGATGGTTTGAGTTGACCAAGCGAACTTTCAGCTACTTC
GATGTGGAAAATGTGGAGCGGAGACGCGAACGTGGTCGCATTCATTTGAA
GGGCGTTCGCCTGGTGGAGGAGGCGACGGTCAGTGGCGAGGGCGGCGATC
CCTTTGCACCGGATGGTTATCCGTTCCAAGTGGGCTACTGTGAGATCTCT
GCGTCGGCCAATTCGCATCAGCTGGAGAACGGCAACGGCGGTGGTAGTGG
CGTTGGAATCGAGGGTCAGCAGAGTGGACGAGCGGTGCCACAGTACACAC
TCTACGTGATCGCCAACAGCGAAAAGGAGCGCAGCGAGTGGATCCGCGCC
ATCCGCCAAGTTTGTGAGGATAGTAATACTCCAAAATCGTATCGCTATCA
TCCGGGCTTGTGGTCTGGAAAGAAGTGGAGCTGCTGCAAGGGATTATCTC
GAACCACATTTGGTTGCAGAGCAGCCGCCCATTGGCGTGAGGCCAACAAT
AATCCAAGCAACGGCAGTTCTCCAGCCCAGAATTCAACGCGCAGCATCAG
TCCCAACAGCTCCACGACCAACAGTCAGTTTAGCTTGCAGCACAACAGCT
CGGGGAGTCTCGGCGGAGGAGTGGGCGGCGGATTGGGAGGCGGAGGCAGC
CTTGGCCTAGGCGGCGGAGGAGGAGGTGGCGGCAGTTGCACGCCCACATC
GCTACAGCCTCAGTCCTCGCTGACAACTTTCAAGCAGTCCCCAACTCTAT
TGAACGGCAACGGAACTCTATTGGATGCCAATATGCCTGGCGGTATACCC
ACTCCCGGAACACCAAATTCCAAAGCCAAGGACAACTCCCACTTTGTCAA
GCTGGTGGTGGCTCTCTATCCATTCAAGGCCATCGAAGGCGGCGATTTAT
CGCTGGAAAAGAATGCCGAATACGAAGTGATAGATGACTCACAAGAGCAC
TGGTGGAAGGTCAAAGATGCCTTGGGGAATGTCGGCTATATACCCAGCAA
CTATGTCAAGCCGAAGGCTCTTCTGGGCCTGGAGCGCTATGAATGGTATG
TGGGCGACATGTCACGACAGAGAGCCGAATCGCTGCTGAAGCAAGGTGAT
AAGGAGGGCTGCTTTGTGGTCAGGAAGTCATCGACCAAGGGTCTCTACAC
ACTATCGCTGCATACCAAAGTTCCACAGTCGCATGTGAAGCACTACCACA
TCAAGCAAAATGCTCGCTGCGAGTATTATTTGAGTGAGAAGCACTGCTGT
GAAACAATTCCGGATCTGATTAACTACCATCGCCACAACTCTGGGGGTTT
GGCTTGCCGACTCAAATCCTCGCCCTGCGATCGCCCAGTTCCACCGACGG
CGGGATTGTCCCACGACAAATGGGAGATCCATCCGATGGAACTGATGCTG
ATGGAGGAGCTTGGATCGGGACAGTTTGGTGTTGTGCGGCGCGGCAAGTG
GCGTGGGTCTATCGACACAGCGGTCAAGATGATGAAGGAAGGAACCATGT
CCGAGGACGATTTCATTGAGGAGGCCAAGGTGATGACCAAGCTGCAGCAT
CCAAATCTTGTGCAGCTATATGGCGTCTGCTCCAAGCACCGGCCCATCTA
CATTGTGACCGAGTACATGAAGCACGGATCCTTGTTGAATTACTTGCGAC
GGCATGAGAAGACCCTGATTGGTAATATGGGTCTACTCCTTGACATGTGC
ATACAGGTTAGCAAGGGAATGACCTACCTGGAGCGCCATAACTACATTCA
CCGGGATCTGGCTGCCCGCAACTGTCTCGTGGGTTCCGAGAATGTCGTTA
AAGTGGCCGACTTTGGATTGGCCCGATACGTTCTCGACGATCAGTATACC
AGCTCTGGCGGAACCAAGTTCCCCATCAAGTGGGCCCCGCCCGAAGTGCT
CAACTACACGCGCTTCTCCTCTAAGAGCGATGTGTGGGCATACGGTGTGC
TGATGTGGGAGATCTTCACTTGCGGCAAGATGCCATACGGTCGCCTAAAG
AATACCGAGGTTGTGGAGCGTGTGCAGCGCGGAATTATCCTAGAAAAACC
AAAGTCGTGTGCCAAGGAGATTTATGATGTCATGAAGTTGTGCTGGTCAC
ATGGACCCGAGGAGCGTCCCGCTTTCCGTGTGCTCATGGATCAGCTGGCT
CTTGTGGCCCAAACGCTAACCGACTAAAAGCTTTCTAGACCAT

BS05076.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:13:11
Subject Length Description Subject Range Query Range Score Percent Strand
Btk29A-RE 2361 CG8049-PE 1..2361 17..2377 11805 100 Plus
Btk29A-RD 2361 CG8049-PD 1..2361 17..2377 11805 100 Plus
Btk29A-RB 2361 CG8049-PB 1..2361 17..2377 11805 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:13:12
Subject Length Description Subject Range Query Range Score Percent Strand
Btk29A-RE 4785 CG8049-RE 260..2620 17..2377 11805 100 Plus
Btk29A-RD 3674 CG8049-RD 281..2641 17..2377 11805 100 Plus
Btk29A-RB 3420 CG8049-RB 593..2953 17..2377 11805 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:13:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8260906..8261681 2147..1372 3880 100 Minus
2L 23513712 2L 8298071..8298322 268..17 1260 100 Minus
2L 23513712 2L 8262475..8262680 913..708 1030 100 Minus
2L 23513712 2L 8283869..8284064 560..365 980 100 Minus
2L 23513712 2L 8283408..8283557 708..559 750 100 Minus
2L 23513712 2L 8260696..8260832 2280..2144 685 100 Minus
2L 23513712 2L 8261943..8262075 1242..1110 665 100 Minus
2L 23513712 2L 8261740..8261868 1371..1243 645 100 Minus
2L 23513712 2L 8262284..8262404 1031..911 605 100 Minus
2L 23513712 2L 8260538..8260636 2377..2279 495 100 Minus
2L 23513712 2L 8284124..8284222 365..267 495 100 Minus
2L 23513712 2L 8262139..8262221 1111..1029 415 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:13:09 has no hits.

BS05076.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:51:50 Download gff for BS05076.complete
Subject Subject Range Query Range Percent Splice Strand
Btk29A-RE 500..2858 17..2375 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:54 Download gff for BS05076.complete
Subject Subject Range Query Range Percent Splice Strand
Btk29A-RB 593..2951 17..2375 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:58:08 Download gff for BS05076.complete
Subject Subject Range Query Range Percent Splice Strand
Btk29A-RE 500..2858 17..2375 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:26 Download gff for BS05076.complete
Subject Subject Range Query Range Percent Splice Strand
Btk29A-RB 593..2951 17..2375 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:26 Download gff for BS05076.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8298071..8298322 17..268 100   Minus
2L 8260540..8260636 2279..2375 100 <- Minus
2L 8260698..8260831 2145..2278 100 <- Minus
2L 8260909..8261681 1372..2144 100 <- Minus
2L 8261740..8261868 1243..1371 100 <- Minus
2L 8261943..8262073 1112..1242 100 <- Minus
2L 8262139..8262219 1031..1111 100 <- Minus
2L 8262285..8262401 914..1030 100 <- Minus
2L 8262475..8262680 708..913 100 <- Minus
2L 8283409..8283555 561..707 100 <- Minus
2L 8283869..8284064 365..560 100 <- Minus
2L 8284125..8284220 269..364 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:54 Download gff for BS05076.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8262475..8262680 708..913 100 <- Minus
arm_2L 8283409..8283555 561..707 100 <- Minus
arm_2L 8283869..8284064 365..560 100 <- Minus
arm_2L 8284125..8284220 269..364 100 <- Minus
arm_2L 8260540..8260636 2279..2375 100 <- Minus
arm_2L 8260698..8260831 2145..2278 100 <- Minus
arm_2L 8260909..8261681 1372..2144 100 <- Minus
arm_2L 8261740..8261868 1243..1371 100 <- Minus
arm_2L 8261943..8262073 1112..1242 100 <- Minus
arm_2L 8262139..8262219 1031..1111 100 <- Minus
arm_2L 8262285..8262401 914..1030 100 <- Minus
arm_2L 8298071..8298322 17..268 100   Minus

BS05076.pep Sequence

Translation from 16 to 2376

> BS05076.pep
MMGTKHRNSHVNGSIKSSSSLRSSSKSFQAKMDLMSERLYDVVKSGSMVK
RAQNKKRFTPVNYKHRWFELTKRTFSYFDVENVERRRERGRIHLKGVRLV
EEATVSGEGGDPFAPDGYPFQVGYCEISASANSHQLENGNGGGSGVGIEG
QQSGRAVPQYTLYVIANSEKERSEWIRAIRQVCEDSNTPKSYRYHPGLWS
GKKWSCCKGLSRTTFGCRAAAHWREANNNPSNGSSPAQNSTRSISPNSST
TNSQFSLQHNSSGSLGGGVGGGLGGGGSLGLGGGGGGGGSCTPTSLQPQS
SLTTFKQSPTLLNGNGTLLDANMPGGIPTPGTPNSKAKDNSHFVKLVVAL
YPFKAIEGGDLSLEKNAEYEVIDDSQEHWWKVKDALGNVGYIPSNYVKPK
ALLGLERYEWYVGDMSRQRAESLLKQGDKEGCFVVRKSSTKGLYTLSLHT
KVPQSHVKHYHIKQNARCEYYLSEKHCCETIPDLINYHRHNSGGLACRLK
SSPCDRPVPPTAGLSHDKWEIHPMELMLMEELGSGQFGVVRRGKWRGSID
TAVKMMKEGTMSEDDFIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTEY
MKHGSLLNYLRRHEKTLIGNMGLLLDMCIQVSKGMTYLERHNYIHRDLAA
RNCLVGSENVVKVADFGLARYVLDDQYTSSGGTKFPIKWAPPEVLNYTRF
SSKSDVWAYGVLMWEIFTCGKMPYGRLKNTEVVERVQRGIILEKPKSCAK
EIYDVMKLCWSHGPEERPAFRVLMDQLALVAQTLTD*

BS05076.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:49:44
Subject Length Description Subject Range Query Range Score Percent Strand
Btk29A-PE 786 CG8049-PE 1..786 1..786 4208 100 Plus
Btk29A-PD 786 CG8049-PD 1..786 1..786 4208 100 Plus
Btk29A-PB 786 CG8049-PB 1..786 1..786 4208 100 Plus
Btk29A-PF 603 CG8049-PF 26..603 215..786 2975 96.7 Plus
Btk29A-PA 603 CG8049-PA 26..603 215..786 2975 96.7 Plus