Clone Sequence Records
BS05094.3prime Sequence
900 bp (737 high quality bases) assembled on 2005-12-02
> BS05094.3prime
ATGGTCTAGAAAGCTTTCACGGTTTCATGGTCCAGAAGTTCTTCTTGGGT
TTCGCGCCCGTGGACAGGGCCACGTTGCTGCTGCTGCTCATGCTCATGCT
GCCGCCGCCCATGCCGCCAACGGCCACGCCCACACCGGGTCCAACGCCCA
CGGCGGAGGCCATCGATCTGCCCGAAGCGCGCTGCTGGTCCGCCGAGCAG
CGGCGTGGATAGTTGAAGGGCGACAAGGAACCGGCGCCCACGACGCCGGA
TCCCTCGTGCATGGGCGTCATCATGCCGCCAACACCAACACCACCACCAC
CACCGCCGCCGCCGCCCACAGCCAAGGTCATGCCAATGCCCTGATCCTCG
CTGCAGCTGGCCATGCTGCTTTTCGATGTGGAAGTGCCCGAGGCCGTGGA
GGATCGACAGCTGCGCAGGTTGTGCGGCAACGTGTTGTTGTTCAGGCTGT
GATGGTGCATCGCCTGTTGCTGCTGGTGGTTGTGATGGTGGTGCAGCGGT
CCGGTGGGCGTGGCGGACTTGTAGTACCGCAGACTCTCGTTGTAGCTGGC
GCCGCTGCTGCTGCCGCTGCCACTGAAGCCGGAGTCAAGGTCGCCCTCAT
CGAACTCCGGATTAATGCAGCTACTGTGGCCATGATCCTTGAGCTCCATG
CTGTTCAGGGTGCTCGATAGGTTCTCCAGGCTGGCGTGCGAGGCGGAGCT
CGAGTTCGAGGTGCCCCCTGCACCAGCCGCACCGCCCAGGAGGCCGCCGC
GTCTGGGTCTCTGGGCGGTCTTCGTTGGTCCCGCCACCACGCTGGACACC
GCCGATCCACCCACTGCACCAGCGGACATCGAGGTGCTTGGCTCATCGGC
GCCCATGGCGTGACTGGGACTGACGTCCGGCGGTGTCGGCGGCATTATTA
BS05094.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:57:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32541-PA | 2208 | CG32541-RA | 1325..2208 | 900..17 | 4420 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43759-RC | 6340 | CG43759-RC | 2391..3274 | 900..17 | 4420 | 100 | Minus |
| CG43759-RD | 4396 | CG43759-RD | 2204..3087 | 900..17 | 4420 | 100 | Minus |
| CG43759-RB | 4583 | CG43759-RB | 2391..3274 | 900..17 | 4420 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 19:04:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19012465..19013348 | 900..17 | 4420 | 100 | Minus |
Blast to na_te.dros performed 2015-02-02 19:04:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6754..6916 | 500..348 | 151 | 60.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6879 | 585..433 | 146 | 59.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2333..2401 | 500..433 | 135 | 68.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6823 | 500..408 | 134 | 67.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6775..6860 | 500..419 | 132 | 66.7 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1054..1151 | 516..419 | 128 | 64 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1513..1585 | 520..450 | 125 | 67.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2612..2679 | 500..433 | 124 | 64.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2368 | 494..433 | 123 | 68.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2823..2904 | 107..23 | 120 | 63.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2475..2514 | 113..74 | 119 | 77.5 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9171..9218 | 586..539 | 114 | 70.8 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 141..188 | 586..539 | 114 | 70.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6767 | 117..74 | 112 | 72.7 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1102..1152 | 500..450 | 111 | 68.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2616..2646 | 104..74 | 110 | 83.9 | Minus |
BS05094.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:01:48 Download gff for
BS05094.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32541-PA | 1326..2208 | 17..899 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:27:22 Download gff for
BS05094.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32541-PA | 1326..2208 | 17..899 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:14:25 Download gff for
BS05094.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43759-RA | 2392..3278 | 12..899 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:56:58 Download gff for
BS05094.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43759-RB | 2392..3278 | 12..899 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 20:56:58 Download gff for
BS05094.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19012466..19013352 | 12..899 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:14:25 Download gff for
BS05094.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18906499..18907385 | 12..899 | 99 | | Minus |
BS05094.5prime Sequence
886 bp (834 high quality bases) assembled on 2005-12-02
> BS05094.5prime
GAAGTTATCAGTCGACATGTATCCGGCCAGCGGCAGTGGAGGAGGCAGTG
CAGCGACCGCTGCTAAGTTCCAGAATCGCTGCGGATCGCCGCAGTTTGCC
AGCGACTATCCGCATCCACATCCGCACCAGCATCCGCACCAGACGACATC
GGTGGCGGTGCACAGTGCCCCGCCCGGAGTGAGTGGTGGCTCCATAGCCA
GCGGTGGGTCCATGTCCATGCGTCACGGCCAGCGGGTGGTGGCCTCAGCC
CATCAGCATCCCAGTCAGATGACCCTGAACCACGGCGGTATGGGCCACAA
CCACAACCACGGCATGGGCATGGCCATGGGAATGGGTCACAATCATGGAC
ATGCAGCGGCCACCTTGGGCCATCCGCACTCGCATTCGCACAACAACAGC
AGCGGCAGCAGCAGCCACGGACATGTGGGCTCGCATCTGATCTTCCCCGA
CGACATGGACAGCATCGAGTTCTGCATGCCGGCGGCGCCCTCCTCCTCGT
CCGCCTCCTCGCAGAACGGTCTCGGCGACCAGTTGCTCTTGGGCAGCAGT
CACGGCGAGGCGTTCACGGAGCGCCGAAGGAGGGGTCACAGCCGGCGCAG
CAATCACAAGATGGACGTGGAACAGCAGGTTAAGTGGTCTCGCAAGAACA
TCGCCGCCACCATGGAACGCTTCGAGCCCACGCCCAACACACAGTCCTCG
TCGTCCACTTCATCGCTGGACTATGGATTTGCAGCCGGCGTGATGACACC
CAGTGGCAGCAGTGCTACGGCCTCGCATGGCGGTGGCGCCTCCAATCCCT
CACTGCACGTGGCCTTCAACGGAGGCGGCGGAGCAGTGGGCGGTGGCTCA
TCCGCGGCATCAGGCGCTAGTGGTGTCAGCGGCTCG
BS05094.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:57:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32541-PA | 2208 | CG32541-RA | 1..870 | 17..886 | 4350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:25:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43759-RC | 6340 | CG43759-RC | 1067..1936 | 17..886 | 4350 | 100 | Plus |
| CG43759-RD | 4396 | CG43759-RD | 880..1749 | 17..886 | 4350 | 100 | Plus |
| CG43759-RB | 4583 | CG43759-RB | 1067..1936 | 17..886 | 4350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:25:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19011073..19011686 | 17..630 | 3070 | 100 | Plus |
| X | 23542271 | X | 19011750..19012010 | 626..886 | 1305 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 19:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1100..1148 | 371..418 | 134 | 77.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2318..2369 | 370..420 | 131 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2357..2421 | 353..418 | 129 | 70.1 | Plus |
| TART-A | 13424 | TART-A 13424bp | 904..1026 | 378..497 | 119 | 61.6 | Plus |
| TART-A | 13424 | TART-A 13424bp | 12082..12204 | 378..497 | 119 | 61.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6705..6799 | 321..420 | 118 | 62 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1066..1105 | 382..420 | 116 | 80 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1523..1551 | 390..418 | 109 | 86.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2486..2514 | 390..418 | 109 | 86.2 | Plus |
BS05094.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:01:49 Download gff for
BS05094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32541-PA | 1..870 | 17..886 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:27:23 Download gff for
BS05094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32541-PA | 1..870 | 17..886 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:44:15 Download gff for
BS05094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43759-RA | 1063..1936 | 9..886 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 21:12:30 Download gff for
BS05094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43759-RB | 1063..1936 | 9..886 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 21:12:30 Download gff for
BS05094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19011069..19011684 | 9..628 | 99 | -> | Plus |
| X | 19011753..19012010 | 629..886 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:44:15 Download gff for
BS05094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18905102..18905717 | 9..628 | 99 | -> | Plus |
| arm_X | 18905786..18906043 | 629..886 | 100 | | Plus |
BS05094.complete Sequence
2240 bp assembled on 2009-08-24
GenBank Submission: KX796286
> BS05094.complete
GAAGTTATCAGTCGACATGTATCCGGCCAGCGGCAGTGGAGGAGGCAGTG
CAGCGACCGCTGCTAAGTTCCAGAATCGCTGCGGATCGCCGCAGTTTGCC
AGCGACTATCCGCATCCACATCCGCACCAGCATCCGCACCAGACGACATC
GGTGGCGGTGCACAGTGCCCCGCCCGGAGTGAGTGGTGGCTCCATAGCCA
GCGGTGGGTCCATGTCCATGCGTCACGGCCAGCGGGTGGTGGCCTCAGCC
CATCAGCATCCCAGTCAGATGACCCTGAACCACGGCGGTATGGGCCACAA
CCACAACCACGGCATGGGCATGGCCATGGGAATGGGTCACAATCATGGAC
ATGCAGCGGCCACCTTGGGCCATCCGCACTCGCATTCGCACAACAACAGC
AGCGGCAGCAGCAGCCACGGACATGTGGGCTCGCATCTGATCTTCCCCGA
CGACATGGACAGCATCGAGTTCTGCATGCCGGCGGCGCCCTCCTCCTCGT
CCGCCTCCTCGCAGAACGGTCTCGGCGACCAGTTGCTCTTGGGCAGCAGT
CACGGCGAGGCGTTCACGGAGCGCCGAAGGAGGGGTCACAGCCGGCGCAG
CAATCACAAGATGGACGTGGAACAGCAGGTTAAGTGGTCTCGCAAGAACA
TCGCCGCCACCATGGAACGCTTCGAGCCCACGCCCAACACACAGTCCTCG
TCGTCCACTTCATCGCTGGACTATGGATTTGCAGCCGGCGTGATGACACC
CAGTGGCAGCAGTGCTACGGCCTCGCATGGCGGTGGCGCCTCCAATCCCT
CACTGCACGTGGCCTTCAACGGAGGCGGCGGAGCAGTGGGCGGTGGCTCA
TCCGCGGCATCAGGCGCTAGTGGTGTCAGCGGCTCGGGAGCAGCTGCAGC
GGCGGCGCCCTTCAACCATGTCTATTCGTATGCTTACTACGAACCGGGGG
CAGCCAAGTGTCACACCAACGTGCCTGCCGCCCAAGGAGCTGGTCCTGGA
CAGGGTCAGGCCCACCAGGTCCAGTCGAAGAGCCCGCCGCGCAACTCGAT
ACGCGCCCTGCTGGCCAAGAGCTTCCGCTCGAAGAGCAGCACCAACCATG
GCGGACAGTCCACATCCAGTTCGCCGAGTGCCGAGGAGCGGGATCGCCAC
ACATACACCACTCGCTACGGCACCACCGAGAACCTGTACGAGGAGGTCAG
CGATCAGAAGATTCGCAAGGTGCTGTCCGACAACCGGATCGCTAGTGGCT
CCAGTGTGGGCAATGTTAAGGAGGAGCAGCGGCGCGTACAGCACAACCAT
TTTAGGGTGCTCGACGAGCTAAATCTCTCGCTGGAGGCCCTAATAATGCC
GCCGACACCGCCGGACGTCAGTCCCAGTCACGCCATGGGCGCCGATGAGC
CAAGCACCTCGATGTCCGCTGGTGCAGTGGGTGGATCGGCGGTGTCCAGC
GTGGTGGCGGGACCAACGAAGACCGCCCAGAGACCCAGACGCGGCGGCCT
CCTGGGCGGTGCGGCTGGTGCAGGGGGCACCTCGAACTCGAGCTCCGCCT
CGCACGCCAGCCTGGAGAACCTATCGAGCACCCTGAACAGCATGGAGCTC
AAGGATCATGGCCACAGTAGCTGCATTAATCCGGAGTTCGATGAGGGCGA
CCTTGACTCCGGCTTCAGTGGCAGCGGCAGCAGCAGCGGCGCCAGCTACA
ACGAGAGTCTGCGGTACTACAAGTCCGCCACGCCCACCGGACCGCTGCAC
CACCATCACAACCACCAGCAGCAACAGGCGATGCACCATCACAGCCTGAA
CAACAACACGTTGCCGCACAACCTGCGCAGCTGTCGATCCTCCACGGCCT
CGGGCACTTCCACATCGAAAAGCAGCATGGCCAGCTGCAGCGAGGATCAG
GGCATTGGCATGACCTTGGCTGTGGGCGGCGGCGGCGGTGGTGGTGGTGG
TGTTGGTGTTGGCGGCATGATGACGCCCATGCACGAGGGATCCGGCGTCG
TGGGCGCCGGTTCCTTGTCGCCCTTCAACTATCCACGCCGCTGCTCGGCG
GACCAGCAGCGCGCTTCGGGCAGATCGATGGCCTCCGCCGTGGGCGTTGG
ACCCGGTGTGGGCGTGGCCGTTGGCGGCATGGGCGGCGGCAGCATGAGCA
TGAGCAGCAGCAGCAACGTGGCCCTGTCCACGGGCGCGAAACCCAAGAAG
AACTTCTGGACCATGAAACCGTGAAAGCTTTCTAGACCAT
BS05094.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:30:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43759-RC | 2208 | CG43759-PC | 1..2208 | 17..2224 | 11040 | 100 | Plus |
| CG43759-RD | 2208 | CG43759-PD | 1..2208 | 17..2224 | 11040 | 100 | Plus |
| CG43759-RB | 2703 | CG43759-PB | 1..2208 | 17..2224 | 11040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43759-RC | 6340 | CG43759-RC | 1067..3274 | 17..2224 | 11040 | 100 | Plus |
| CG43759-RD | 4396 | CG43759-RD | 880..3087 | 17..2224 | 11040 | 100 | Plus |
| CG43759-RB | 4583 | CG43759-RB | 1067..3274 | 17..2224 | 11040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19011750..19013348 | 626..2224 | 7995 | 100 | Plus |
| X | 23542271 | X | 19011073..19011686 | 17..630 | 3070 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 01:30:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6879 | 1656..1808 | 146 | 59.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1100..1148 | 371..418 | 134 | 77.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6775..6860 | 1741..1822 | 132 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2318..2369 | 370..420 | 131 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2357..2421 | 353..418 | 129 | 70.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1054..1151 | 1725..1822 | 128 | 64 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2612..2679 | 1741..1808 | 124 | 64.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2823..2904 | 2134..2218 | 120 | 63.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2475..2514 | 2128..2167 | 119 | 77.5 | Plus |
| TART-A | 13424 | TART-A 13424bp | 904..1026 | 378..497 | 119 | 61.6 | Plus |
| TART-A | 13424 | TART-A 13424bp | 12082..12204 | 378..497 | 119 | 61.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6705..6799 | 321..420 | 118 | 62 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1066..1105 | 382..420 | 116 | 80 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 141..188 | 1655..1702 | 114 | 70.8 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9171..9218 | 1655..1702 | 114 | 70.8 | Plus |
BS05094.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:02:24 Download gff for
BS05094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32541-RA | 1043..3249 | 17..2223 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:49:50 Download gff for
BS05094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43759-RA | 1067..3273 | 17..2223 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:27 Download gff for
BS05094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43759-RB | 1067..3273 | 17..2223 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:27 Download gff for
BS05094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19011073..19011684 | 17..628 | 100 | -> | Plus |
| X | 19011753..19013347 | 629..2223 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:49:50 Download gff for
BS05094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18905106..18905717 | 17..628 | 100 | -> | Plus |
| arm_X | 18905786..18907380 | 629..2223 | 100 | | Plus |
BS05094.pep Sequence
Translation from 16 to 2223
> BS05094.pep
MYPASGSGGGSAATAAKFQNRCGSPQFASDYPHPHPHQHPHQTTSVAVHS
APPGVSGGSIASGGSMSMRHGQRVVASAHQHPSQMTLNHGGMGHNHNHGM
GMAMGMGHNHGHAAATLGHPHSHSHNNSSGSSSHGHVGSHLIFPDDMDSI
EFCMPAAPSSSSASSQNGLGDQLLLGSSHGEAFTERRRRGHSRRSNHKMD
VEQQVKWSRKNIAATMERFEPTPNTQSSSSTSSLDYGFAAGVMTPSGSSA
TASHGGGASNPSLHVAFNGGGGAVGGGSSAASGASGVSGSGAAAAAAPFN
HVYSYAYYEPGAAKCHTNVPAAQGAGPGQGQAHQVQSKSPPRNSIRALLA
KSFRSKSSTNHGGQSTSSSPSAEERDRHTYTTRYGTTENLYEEVSDQKIR
KVLSDNRIASGSSVGNVKEEQRRVQHNHFRVLDELNLSLEALIMPPTPPD
VSPSHAMGADEPSTSMSAGAVGGSAVSSVVAGPTKTAQRPRRGGLLGGAA
GAGGTSNSSSASHASLENLSSTLNSMELKDHGHSSCINPEFDEGDLDSGF
SGSGSSSGASYNESLRYYKSATPTGPLHHHHNHQQQQAMHHHSLNNNTLP
HNLRSCRSSTASGTSTSKSSMASCSEDQGIGMTLAVGGGGGGGGGVGVGG
MMTPMHEGSGVVGAGSLSPFNYPRRCSADQQRASGRSMASAVGVGPGVGV
AVGGMGGGSMSMSSSSNVALSTGAKPKKNFWTMKP*
BS05094.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:42:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43759-PC | 735 | CG43759-PC | 1..735 | 1..735 | 3868 | 100 | Plus |
| CG43759-PD | 735 | CG43759-PD | 1..735 | 1..735 | 3868 | 100 | Plus |
| CG43759-PB | 900 | CG43759-PB | 1..735 | 1..735 | 3868 | 100 | Plus |
| CG43759-PA | 735 | CG43759-PA | 1..735 | 1..735 | 3868 | 100 | Plus |
| CG43658-PC | 2263 | CG43658-PC | 183..529 | 300..639 | 294 | 31.7 | Plus |
