Clone BS05101 Report

Search the DGRC for BS05101

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:51
Well:1
Vector:pDNR-Dual
Associated Gene/Transcriptpont-RA
Protein status:BS05101.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05101.3prime Sequence

883 bp (779 high quality bases) assembled on 2005-12-02

> BS05101.3prime
ATGGTCTAGAAAGCTTTTACAACATAAACTTATTGTTCTTTTCGGACAAA
TGCTTCGAGGAGCGCTTGGCGTCAAGGAAGAGCGAGTGCACATCCTCGAT
ATCATCCTTGCTGATCTGGTTGCGTCCGTTCACCTTGCACATCTGATGAG
CCGGGGTCAGCAGCTGGACGGCGTAGCGCAGCGTGGAGCTGGTTCCAATC
TCGCTGAGACGTGTAAATGCGTTCTCCTCCAGCTGCAGTCCCTCGGTCTG
GGCGCGCAACTTGATTATCTGCTCCATGTCGGCAGTGGAGTAGAGTAGTG
TGCGGATGATCAGCAAACGATCGAGCAGATCTAGCGGAATTCCGTGCGGC
GAAACTATGTCGGTGGTGCCACGAATAACACAGCGTCCACGATTGGTGGC
AAAAATCACAATTGGTGCAATGGGAGATTCCAGGGACTTGTGTAGGTAGG
TGAAGGTCTCCAAATCAAGCATGTGAATTTCATCGATGAAGAGAACTCCG
GGAACCAGCTCGGCTATGCCCTGGTCAATGTACTTGTTTACCACCTTGTT
GATCTCCATGCGTAGTTTGTCAGTGATTTCAGTTTTCTTCGGCTTCATAA
GCTGGCCCATCATGGAGAGCACATCCTGGCCGCCCTGTGGACGAGCATTG
GCCACATCCAGATCGTGCAGAGTAACATCCTGGATAACCTCCTTCTTCTT
GTGGACATCGCCCTTGGGCAGCGGCACATACTCCTCGGTTTCGAGATCAA
ACTCAGTGGCAAAGGTGTCACTGCGACCCTGACGCTTTACGGCCCCCCTG
TTGGCCTCTATGTAGATGACATCGCCCACCTCCCCCTTTTCCTTTTGCAA
GGCATCAAAGATGCTGGGATCCAGCTTGAGCTG

BS05101.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG4003-PA 1371 pont-RA 505..1371 883..17 4260 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
pont-RA 1659 CG4003-RA 725..1591 883..17 4290 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:17:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10263476..10263831 372..17 1780 100 Minus
3R 32079331 3R 10262847..10263159 883..571 1520 99 Minus
3R 32079331 3R 10263216..10263415 571..372 1000 100 Minus
Blast to na_te.dros performed on 2015-02-10 19:17:35 has no hits.

BS05101.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:01:50 Download gff for BS05101.3prime
Subject Subject Range Query Range Percent Splice Strand
pont-PA 505..1371 17..883 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:27:25 Download gff for BS05101.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4003-PA 505..1371 17..883 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:16:55 Download gff for BS05101.3prime
Subject Subject Range Query Range Percent Splice Strand
pont-RA 725..1595 10..883 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:35:14 Download gff for BS05101.3prime
Subject Subject Range Query Range Percent Splice Strand
pont-RA 725..1595 10..883 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:35:14 Download gff for BS05101.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10262847..10263159 571..883 99 -> Minus
3R 10263217..10263415 372..570 100 -> Minus
3R 10263477..10263835 10..371 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:16:55 Download gff for BS05101.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6088569..6088881 571..883 99 -> Minus
arm_3R 6088939..6089137 372..570 100 -> Minus
arm_3R 6089199..6089557 10..371 99   Minus

BS05101.5prime Sequence

812 bp (807 high quality bases) assembled on 2005-12-02

> BS05101.5prime
GAAGTTATCAGTCGACATGAAGATCGAGGAAGTCAAGAGCACCGTGCGCA
CCCAACGCATCGCAGCCCACAGCCATGTGAAGGGATTGGGCCTGGACGAG
GTTGGAGCTGCCGTGCACAGTGCAGCCGGACTGGTGGGTCAGAAGGCGGC
ACGCGAGGCAGCCGGCATTGTGGTGGACCTCATCAAATCGAAAAAGATGG
CCGGACGAGCGCTTCTGCTGGCTGGGCCACCAGGCACGGGCAAAACCGCC
ATTGCTCTGGCCATTGCCCAGGAGCTGGGTAACAAAGTGCCCTTCTGTCC
CATGGTCGGATCGGAGGTATTCAGCAATGAGATCAAGAAGACCGAGGTGC
TAATGGAGAATTTCCGGCGCTCCATTGGTCTGCGCATTCGTGAGACCAAA
GAGGTGTACGAGGGCGAGGTTACGGAACTCACGCCCGTGGAAACCGAGAA
TCCTATGGGTGGCTATGGCAAGACTATCAGCAATGTCGTCATCGGCTTGA
AAACAGCCAAGGGAACCAAGCAGCTCAAGCTGGATCCCAGCATCTTTGAT
GCCTTGCAAAAGGAAAAGGTGGAGGTGGGCGATGTCATCTACATAGAGGC
CAACAGTGGTGCCGTAAAGCGTCAGGGTCGCAGTGACACCTTTGCCACTG
AGTTTGATCTCGAAACCGAGGAGTATGTGCCGCTGCCCAAGGGCGATGTC
CACAAGAAGAAGGAGGTTATCCAGGATGTTACTCTGCACGATCTGGATGT
GGCCAATGCTCGTCCACAGGGCGGCCAGGATGTGCTCTCCATGATGGGCC
AGCTTATGAAGC

BS05101.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:58:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG4003-PA 1371 pont-RA 1..796 17..812 3980 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:45:58
Subject Length Description Subject Range Query Range Score Percent Strand
pont-RA 1659 CG4003-RA 220..1016 16..812 3985 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:45:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10262342..10263138 16..812 3985 100 Plus
Blast to na_te.dros performed on 2015-02-11 09:45:57 has no hits.

BS05101.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:01:51 Download gff for BS05101.5prime
Subject Subject Range Query Range Percent Splice Strand
pont-PA 1..796 17..812 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:27:26 Download gff for BS05101.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4003-PA 1..796 17..812 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:20:34 Download gff for BS05101.5prime
Subject Subject Range Query Range Percent Splice Strand
pont-RA 210..1016 5..812 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:03:20 Download gff for BS05101.5prime
Subject Subject Range Query Range Percent Splice Strand
pont-RA 210..1016 5..812 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:03:20 Download gff for BS05101.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10262332..10263138 5..812 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:20:34 Download gff for BS05101.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6088054..6088860 5..812 99   Plus

BS05101.complete Sequence

1403 bp (1403 high quality bases) assembled on 2005-09-12

GenBank Submission: FJ638779

> BS05101.complete
GAAGTTATCAGTCGACATGAAGATCGAGGAAGTCAAGAGCACCGTGCGCA
CCCAACGCATCGCAGCCCACAGCCATGTGAAGGGATTGGGCCTGGACGAG
GTTGGAGCTGCCGTGCACAGTGCAGCCGGACTGGTGGGTCAGAAGGCGGC
ACGCGAGGCAGCCGGCATTGTGGTGGACCTCATCAAATCGAAAAAGATGG
CCGGACGAGCGCTTCTGCTGGCTGGGCCACCAGGCACGGGCAAAACCGCC
ATTGCTCTGGCCATTGCCCAGGAGCTGGGTAACAAAGTGCCCTTCTGTCC
CATGGTCGGATCGGAGGTATTCAGCAATGAGATCAAGAAGACCGAGGTGC
TAATGGAGAATTTCCGGCGCTCCATTGGTCTGCGCATTCGTGAGACCAAA
GAGGTGTACGAGGGCGAGGTTACGGAACTCACGCCCGTGGAAACCGAGAA
TCCTATGGGTGGCTATGGCAAGACTATCAGCAATGTCGTCATCGGCTTGA
AAACAGCCAAGGGAACCAAGCAGCTCAAGCTGGATCCCAGCATCTTTGAT
GCCTTGCAAAAGGAAAAGGTGGAGGTGGGCGATGTCATCTACATAGAGGC
CAACAGTGGTGCCGTAAAGCGTCAGGGTCGCAGTGACACCTTTGCCACTG
AGTTTGATCTCGAAACCGAGGAGTATGTGCCGCTGCCCAAGGGCGATGTC
CACAAGAAGAAGGAGGTTATCCAGGATGTTACTCTGCACGATCTGGATGT
GGCCAATGCTCGTCCACAGGGCGGCCAGGATGTGCTCTCCATGATGGGCC
AGCTTATGAAGCCGAAGAAAACTGAAATCACTGACAAACTACGCATGGAG
ATCAACAAGGTGGTAAACAAGTACATTGACCAGGGCATAGCCGAGCTGGT
TCCCGGAGTTCTCTTCATCGATGAAATTCACATGCTTGATTTGGAGACCT
TCACCTACCTACACAAGTCCCTGGAATCTCCCATTGCACCAATTGTGATT
TTTGCCACCAATCGTGGACGCTGTGTTATTCGTGGCACCACCGACATAGT
TTCGCCGCACGGAATTCCGCTAGATCTGCTCGATCGTTTGCTGATCATCC
GCACACTACTCTACTCCACTGCCGACATGGAGCAGATAATCAAGTTGCGC
GCCCAGACCGAGGGACTGCAGCTGGAGGAGAACGCATTTACACGTCTCAG
CGAGATTGGAACCAGCTCCACGCTGCGCTACGCCGTCCAGCTGCTGACCC
CGGCTCATCAGATGTGCAAGGTGAACGGACGCAACCAGATCAGCAAGGAT
GATATCGAGGATGTGCACTCGCTCTTCCTTGACGCCAAGCGCTCCTCGAA
GCATTTGTCCGAAAAGAACAATAAGTTTATGTTGTAAAAGCTTTCTAGAC
CAT

BS05101.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:52:21
Subject Length Description Subject Range Query Range Score Percent Strand
pont-RA 1371 CG4003-PA 1..1371 17..1387 6855 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:52:23
Subject Length Description Subject Range Query Range Score Percent Strand
pont-RA 1659 CG4003-RA 220..1591 16..1387 6860 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:52:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10262342..10263159 16..833 4090 100 Plus
3R 32079331 3R 10263476..10263831 1032..1387 1780 100 Plus
3R 32079331 3R 10263216..10263415 833..1032 1000 100 Plus
Blast to na_te.dros performed on 2014-11-27 19:52:20 has no hits.

BS05101.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:33:03 Download gff for BS05101.complete
Subject Subject Range Query Range Percent Splice Strand
pont-RA 1..1371 17..1387 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:17:23 Download gff for BS05101.complete
Subject Subject Range Query Range Percent Splice Strand
pont-RA 221..1606 5..1394 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:09 Download gff for BS05101.complete
Subject Subject Range Query Range Percent Splice Strand
pont-RA 221..1589 17..1385 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:33:03 Download gff for BS05101.complete
Subject Subject Range Query Range Percent Splice Strand
pont-RA 221..1606 5..1394 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:09:53 Download gff for BS05101.complete
Subject Subject Range Query Range Percent Splice Strand
pont-RA 221..1589 17..1385 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:09:53 Download gff for BS05101.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10262343..10263159 17..833 100 -> Plus
3R 10263217..10263415 834..1032 100 -> Plus
3R 10263477..10263829 1033..1385 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:09 Download gff for BS05101.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6088065..6088881 17..833 100 -> Plus
arm_3R 6088939..6089137 834..1032 100 -> Plus
arm_3R 6089199..6089551 1033..1385 100   Plus

BS05101.pep Sequence

Translation from 16 to 1386

> BS05101.pep
MKIEEVKSTVRTQRIAAHSHVKGLGLDEVGAAVHSAAGLVGQKAAREAAG
IVVDLIKSKKMAGRALLLAGPPGTGKTAIALAIAQELGNKVPFCPMVGSE
VFSNEIKKTEVLMENFRRSIGLRIRETKEVYEGEVTELTPVETENPMGGY
GKTISNVVIGLKTAKGTKQLKLDPSIFDALQKEKVEVGDVIYIEANSGAV
KRQGRSDTFATEFDLETEEYVPLPKGDVHKKKEVIQDVTLHDLDVANARP
QGGQDVLSMMGQLMKPKKTEITDKLRMEINKVVNKYIDQGIAELVPGVLF
IDEIHMLDLETFTYLHKSLESPIAPIVIFATNRGRCVIRGTTDIVSPHGI
PLDLLDRLLIIRTLLYSTADMEQIIKLRAQTEGLQLEENAFTRLSEIGTS
STLRYAVQLLTPAHQMCKVNGRNQISKDDIEDVHSLFLDAKRSSKHLSEK
NNKFML*

BS05101.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:59:35
Subject Length Description Subject Range Query Range Score Percent Strand
pont-PA 456 CG4003-PA 1..456 1..456 2285 100 Plus
rept-PB 481 CG9750-PB 8..447 5..455 980 45.3 Plus
rept-PC 481 CG9750-PC 8..447 5..455 980 45.3 Plus
rept-PA 481 CG9750-PA 8..447 5..455 980 45.3 Plus