Clone BS05121 Report

Search the DGRC for BS05121

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:51
Well:21
Vector:pDNR-Dual
Associated Gene/Transcripttan-RA
Protein status:BS05121.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05121.3prime Sequence

908 bp (845 high quality bases) assembled on 2005-12-02

> BS05121.3prime
ATGGTCTAGAAAGCTTCTACTCAAAGCCCGCCGGTTGCATGAGGAACTGG
TGCTGGCTGCTCATTGTCGGCAGCTGTATGTCTTCCATGGTCATGGATGT
CTTGGGGATGTTGACGGCCTCCGCCGATCCTCCCGCCTCTGCATCATCCC
CCTCCAGCATGGCACTGTCGAAGCTCTTATTCAGACGATCGTGGAACTCG
GTCATGGAGATTTTCTTGAGTGCGAAACGCTTGCCAAAGGTCTTCTTCAC
CTTCTGGCGGCGTCTCTTCGACAGGATTTTGTTCTTGTTCAGGCCATCGC
TGAAGGATATTGCCCGGCGGAGTTTGCGACCCCACACCTTAACTACTTTC
ACTTGGCTGCTGATGGAGCACTCTTCGCTGTCGTCCTCTGCATCGGCGGC
ATTCTCATCGCTGGGTTCCTCGAAGATTGTCTCCAGATTGGTGGGCGTGA
ACTTTTTCATGCGCCTGCTGGTGTAGATCTTTTCGATGCTTTTAAGTGTT
TGGGCATTTGTGTTCAGTTCTTTGCGTTGCTTCTTTTTGATGGGTTTCAT
GATGGCGCTGCAGATCCGGTTAAAGTTGTCCTTGGACACCCTGGCGGGCA
TTCTGCGACGAGCCACGCCCGCTCGAGCTCCAAAAGTGGAACTGCGTCTG
GAGGATCCACTGATGCAATCGCTGTCGTCATCGTTGTCCTCGCAGCGACT
CAATTGCGAGTCTACATCGTCGGAGTCATGCGATTCACTGCTGACATTGT
CATCGGATTCGGGTGGAGCTATGGGCTCGGATGTGTCCTGCATCTCCTCC
ATGTCCGACAAGGCCATCTGATTTAGTTGCCACGACAGATTCGAGTTAAT
AGTGGGTGACCTGTTGTCTTTTGCTTGAAACGTGATCTTGGCAAAGTCGT
AGACTATG

BS05121.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:58:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG6586-PA 900 tan-RA 9..900 908..17 4435 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:04:14
Subject Length Description Subject Range Query Range Score Percent Strand
tan-RB 1657 CG6586-RB 324..1216 908..16 4450 99.9 Minus
tan-RA 1494 CG6586-RA 324..1216 908..16 4450 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 09:04:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6055714..6056561 863..16 4225 99.9 Minus
3L 28110227 3L 6055616..6055665 908..859 250 100 Minus
Blast to na_te.dros performed on 2015-02-01 09:04:11 has no hits.

BS05121.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:02:22 Download gff for BS05121.3prime
Subject Subject Range Query Range Percent Splice Strand
tan-PA 9..900 17..908 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:28:07 Download gff for BS05121.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6586-PA 9..900 17..908 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:32:12 Download gff for BS05121.3prime
Subject Subject Range Query Range Percent Splice Strand
tan-RA 324..1216 16..908 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:58:15 Download gff for BS05121.3prime
Subject Subject Range Query Range Percent Splice Strand
tan-RA 324..1216 16..908 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 09:58:15 Download gff for BS05121.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 6055616..6055663 861..908 100 -> Minus
3L 6055717..6056561 16..860 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:32:12 Download gff for BS05121.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6048716..6048763 861..908 100 -> Minus
arm_3L 6048817..6049661 16..860 99   Minus

BS05121.5prime Sequence

903 bp (809 high quality bases) assembled on 2005-11-29

> BS05121.5prime
GAAGTTATCAGTCGACATGGATAACATAGTCTACGACTTTGCCAAGATCA
CGTTTCAAGCAAAAGACAACAGGTCACCCACTACTAACTCGAATCTGTCG
TGGCAACTAAATCAGATGGCCTTGTCGGACATGGAGGAGATGCAGGACAC
ATCCGAGCCCATAGCTCCACCCGAATCCGATGACAATGTCAGCAGTGAAT
CGCATGACTCCGACGATGTAGACTCGCAATTGAGTCGCTGCGAGGACAAC
GATGACGACAGCGATTGCATCAGTGGATCCTCCAGACGCAGTTCCACTTT
TGGAGCTCGAGCGGGCGTGGCTCGTCGCAGAATGCCCGCCAGGGTGTCCA
AGGACAACTTTAACCGGATCTGCAGCGCCATCATGAAACCCATCAAAAAG
AAGCAACGCAAAGAACTGAACACAAATGCCCAAACACTTAAAAGCATCGA
AAAGATCTACACCAGCAGGCGCATGAAAAAGTTCACGCCCACCAATCTGG
AGACAATCTTCGAGGAACCCAGCGATGAGAATGCCGCCGATGCAGAGGAC
GACAGCGAAGAGTGCTCCATCAGCAGCCAAGTGAAAGTAGTTAAGGTGTG
GGGTCGCAAACTCCGCCGGGCAATATCCTTCAGCGATGGCCTGAACAAGA
ACAAAATCCTGTCGAAGAGACGCCGCCAGAAGGTGAAGAAGACCTTTGGC
AAGCGTTTCGCACTCAAGAAAATCTCCATGACCGAGTTCCACGATCGTCT
GAATAAGAGCTTCGACAGTGCCATGCTGGAGGGGGATGATGCAGAGGCGG
GAGGATCGGCGGAAGCCGTCAACATCCCCAAGACATCCATGACCATGGAA
GACATACAGCTGCCGACAATGAGCAGCCAGCACCAGTTCCTCCTGCAACC
GGC

BS05121.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:58:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG6586-PA 900 tan-RA 1..887 17..903 4385 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:16:20
Subject Length Description Subject Range Query Range Score Percent Strand
tan-RB 1657 CG6586-RB 316..1202 17..903 4405 99.8 Plus
tan-RA 1494 CG6586-RA 316..1202 17..903 4405 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:16:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6055714..6056547 70..903 4140 99.8 Plus
3L 28110227 3L 6055608..6055665 17..74 290 100 Plus
Blast to na_te.dros performed on 2015-02-10 23:16:17 has no hits.

BS05121.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:02:23 Download gff for BS05121.5prime
Subject Subject Range Query Range Percent Splice Strand
tan-PA 1..887 17..903 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:28:09 Download gff for BS05121.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6586-PA 1..887 17..903 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:18:23 Download gff for BS05121.5prime
Subject Subject Range Query Range Percent Splice Strand
tan-RA 316..1202 17..903 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:27:56 Download gff for BS05121.5prime
Subject Subject Range Query Range Percent Splice Strand
tan-RA 316..1202 17..903 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:27:56 Download gff for BS05121.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6055608..6055663 17..72 100 -> Plus
3L 6055717..6056547 73..903 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:18:23 Download gff for BS05121.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6048708..6048763 17..72 100 -> Plus
arm_3L 6048817..6049647 73..903 99   Plus

BS05121.complete Sequence

932 bp (932 high quality bases) assembled on 2005-09-12

GenBank Submission: FJ635061

> BS05121.complete
GAAGTTATCAGTCGACATGGATAACATAGTCTACGACTTTGCCAAGATCA
CGTTTCAAGCAAAAGACAACAGGTCACCCACTACTAACTCGAATCTGTCG
TGGCAACTAAATCAGATGGCCTTGTCGGACATGGAGGAGATGCAGGACAC
ATCCGAGCCCATAGCTCCACCCGAATCCGATGACAATGTCAGCAGTGAAT
CGCATGACTCCGACGATGTAGACTCGCAATTGAGTCGCTGCGAGGACAAC
GATGACGACAGCGATTGCATCAGTGGATCCTCCAGACGCAGTTCCACTTT
TGGAGCTCGAGCGGGCGTGGCTCGTCGCAGAATGCCCGCCAGGGTGTCCA
AGGACAACTTTAACCGGATCTGCAGCGCCATCATGAAACCCATCAAAAAG
AAGCAACGCAAAGAACTGAACACAAATGCCCAAACACTTAAAAGCATCGA
AAAGATCTACACCAGCAGGCGCATGAAAAAGTTCACGCCCACCAATCTGG
AGACAATCTTCGAGGAACCCAGCGATGAGAATGCCGCCGATGCAGAGGAC
GACAGCGAAGAGTGCTCCATCAGCAGCCAAGTGAAAGTAGTTAAGGTGTG
GGGTCGCAAACTCCGCCGGGCAATATCCTTCAGCGATGGCCTGAACAAGA
ACAAAATCCTGTCGAAGAGACGCCGCCAGAAGGTGAAGAAGACCTTTGGC
AAGCGTTTCGCACTCAAGAAAATCTCCATGACCGAGTTCCACGATCGTCT
GAATAAGAGCTTCGACAGTGCCATGCTGGAGGGGGATGATGCAGAGGCGG
GAGGATCGGCGGAGGCCGTCAACATCCCCAAGACATCCATGACCATGGAA
GACATACAGCTGCCGACAATGAGCAGCCAGCACCAGTTCCTCATGCAACC
GGCGGGCTTTGAGTAGAAGCTTTCTAGACCAT

BS05121.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:20:59
Subject Length Description Subject Range Query Range Score Percent Strand
tan-RB 900 CG6586-PB 1..900 17..916 4500 100 Plus
tan-RA 900 CG6586-PA 1..900 17..916 4500 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:21:00
Subject Length Description Subject Range Query Range Score Percent Strand
tan-RB 1657 CG6586-RB 316..1216 17..917 4505 100 Plus
tan-RA 1494 CG6586-RA 316..1216 17..917 4505 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:20:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6055714..6056561 70..917 4240 100 Plus
3L 28110227 3L 6055608..6055665 17..74 290 100 Plus
Blast to na_te.dros performed on 2014-11-27 10:20:58 has no hits.

BS05121.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:32:45 Download gff for BS05121.complete
Subject Subject Range Query Range Percent Splice Strand
tan-RA 1..900 17..916 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:17:00 Download gff for BS05121.complete
Subject Subject Range Query Range Percent Splice Strand
tan-RA 274..1174 17..917 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:17:45 Download gff for BS05121.complete
Subject Subject Range Query Range Percent Splice Strand
tan-RA 316..1215 17..916 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:32:45 Download gff for BS05121.complete
Subject Subject Range Query Range Percent Splice Strand
tan-RA 274..1174 17..917 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:19:26 Download gff for BS05121.complete
Subject Subject Range Query Range Percent Splice Strand
tan-RA 316..1215 17..916 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:19:26 Download gff for BS05121.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6055608..6055663 17..72 100 -> Plus
3L 6055717..6056560 73..916 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:17:45 Download gff for BS05121.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6048708..6048763 17..72 100 -> Plus
arm_3L 6048817..6049660 73..916 100   Plus

BS05121.pep Sequence

Translation from 16 to 915

> BS05121.pep
MDNIVYDFAKITFQAKDNRSPTTNSNLSWQLNQMALSDMEEMQDTSEPIA
PPESDDNVSSESHDSDDVDSQLSRCEDNDDDSDCISGSSRRSSTFGARAG
VARRRMPARVSKDNFNRICSAIMKPIKKKQRKELNTNAQTLKSIEKIYTS
RRMKKFTPTNLETIFEEPSDENAADAEDDSEECSISSQVKVVKVWGRKLR
RAISFSDGLNKNKILSKRRRQKVKKTFGKRFALKKISMTEFHDRLNKSFD
SAMLEGDDAEAGGSAEAVNIPKTSMTMEDIQLPTMSSQHQFLMQPAGFE*

BS05121.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:03:44
Subject Length Description Subject Range Query Range Score Percent Strand
tan-PA 299 CG6586-PA 1..299 1..299 1525 100 Plus
tan-PB 299 CG6586-PB 1..299 1..299 1525 100 Plus