Clone BS05151 Report

Search the DGRC for BS05151

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:51
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG5973-RC
Protein status:BS05151.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05151.3prime Sequence

801 bp (776 high quality bases) assembled on 2005-12-02

> BS05151.3prime
ATGGTCTAGAAAGCTTTTACTTCTTCATCTTATACCCCTCAGTATACCCA
TAGCTGTCAGCCAGTTCATAATCCTTGGAATAGCACTCAAAGAATTCGCC
CAAAACTTTGCCGTGTGGCAGTTCCCATGTGGCAGAACCACCGTATTTCG
GAGGCAAAGCCTTCGCCTCAATATGGGAGATCAGGGACTTGTAGTCCTTG
CCATGGAAGAAGATCCTCTTGCGCAGCTTTTCGCGAATGAATGGCTTGAA
TACGGCAAAGAGCATATTGAATATATATGAATTATTCACTATGTGAACTG
CTTTCAAACGCATGCAGATGCATTCTTGAATGTAATCCAGCAACATGGCG
GCAAATGACGGTGTAAATTGTGTAATGTGGCTAAGTGGCAGCCCTTCCAT
ATCGATAATGACAACTGAGCCGCAAATTTGTGAGTAGGGCTCCACCATAG
AACCCAGTACGGTCAATTGAATGCCGCGGAATAGATCCACCAAGGGCACT
TGCGATGGCTTCCATTTTTTGCCAGCTTCCAGCACCAAAAGCCGACGGCC
GTGTTGATCTCTTTGGGGCAGCAAATTCAGAATATTTGCCTCGAAAACGT
TTCTCAACTTGCTGGGGATTATGTTCTCGCAAGCGGCTCCATACTTCAAT
TTCATGTGATAAAAGTTCTTGAGCCTTTTCAAGGCACTTTCTGGATAGTA
ATGGGTGGGACGCAGGAACATCATCATATACTCATCATCCAATGGCAGGT
TCAGGTACTTTTCATTTTGAATGAGTTCCCTGAGTTCCTTGATGGCCTGC
T

BS05151.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:58:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG5973-PA 936 CG5973-RA 152..936 801..17 3925 100 Minus
CG5973-PB 936 CG5973-RB 152..936 801..17 3925 100 Minus
CG5973-PC 936 CG5973-RC 152..936 801..17 3925 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 15:35:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG5973-RF 1463 CG5973-RF 383..1167 801..17 3925 100 Minus
CG5973-RE 2204 CG5973-RE 511..1295 801..17 3925 100 Minus
CG5973-RG 1313 CG5973-RG 233..1017 801..17 3925 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 15:35:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7444463..7444643 395..215 905 100 Minus
2L 23513712 2L 7444059..7444213 674..520 775 100 Minus
2L 23513712 2L 7444708..7444859 215..64 760 100 Minus
2L 23513712 2L 7444273..7444399 519..393 635 100 Minus
2L 23513712 2L 7443894..7443985 765..674 460 100 Minus
2L 23513712 2L 7444927..7444973 63..17 235 100 Minus
Blast to na_te.dros performed on 2015-01-30 15:35:39 has no hits.

BS05151.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:03:08 Download gff for BS05151.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5973-PC 152..936 17..801 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:29:10 Download gff for BS05151.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5973-PC 152..936 17..801 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:15:28 Download gff for BS05151.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5973-RD 1850..2637 14..801 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:43:50 Download gff for BS05151.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5973-RG 233..1020 14..801 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:43:50 Download gff for BS05151.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 7444465..7444643 215..393 100 -> Minus
2L 7444709..7444859 64..214 100 -> Minus
2L 7444927..7444976 14..63 98   Minus
2L 7443797..7443832 766..801 100 -> Minus
2L 7444273..7444398 394..519 100 -> Minus
2L 7443894..7443985 674..765 100 -> Minus
2L 7444060..7444213 520..673 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:15:28 Download gff for BS05151.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7444273..7444398 394..519 100 -> Minus
arm_2L 7443797..7443832 766..801 100 -> Minus
arm_2L 7443894..7443985 674..765 100 -> Minus
arm_2L 7444060..7444213 520..673 100 -> Minus
arm_2L 7444465..7444643 215..393 100 -> Minus
arm_2L 7444709..7444859 64..214 100 -> Minus
arm_2L 7444927..7444976 14..63 98   Minus

BS05151.5prime Sequence

851 bp (780 high quality bases) assembled on 2005-11-29

> BS05151.5prime
GAAGTTATCAGTCGACATGGGCAAGGCAGAGTGCATTAGCTACGATGAGC
ACAAGTTGCCCTACATCGATCTGGGCTCGGCACAGATCCGCATGGAGAAG
GAACAAGCGCCGGAATGGGCACTGAAGAAGGCACAGGATGAGTTGCGGGA
AGTGCCCGGCGTCAAGGAGCAGGCCATCAAGGAACTCAGGGAACTCATTC
AAAATGAAAAGTACCTGAACCTGCCATTGGATGATGAGTATATGATGATG
TTCCTGCGTCCCACCCATTACTATCCAGAAAGTGCCTTGAAAAGGCTCAA
GAACTTTTATCACATGAAATTGAAGTATGGAGCCGCTTGCGAGAACATAA
TCCCCAGCAAGTTGAGAAACGTTTTCGAGGCAAATATTCTGAATTTGCTG
CCCCAAAGAGATCAACACGGCCGTCGGCTTTTGGTGCTGGAAGCTGGCAA
AAAATGGAAGCCATCGCAAGTGCCCTTGGTGGATCTATTCCGCGGCATTC
AATTGACCGTACTGGGTTCTATGGTGGAGCCCTACTCACAAATTTGCGGC
TCAGTTGTCATTATCGATATGGAAGGGCTGCCACTTAGCCACATTACACA
ATTTACACCGTCATTTGCCGCCATGTTGCTGGATTACATTCAAGAATGCA
TCTGCATGCGTTTGAAAGCAGTTCACATAGTGAATAATTCATATATATTC
AATATGCTCTTTGCCGTATTCAAGCCATTCATTCGCGAAAAGCTGCGCAA
GAGGATCTTCTTCCATGGCAAGGACTACAAGTCCCTGATCTCCCATATTG
AGGCGAAGGCTTTGCCTCCGAAATACGGTGGTTCTGCCACATGGGAACTG
C

BS05151.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:58:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG5973-PA 936 CG5973-RA 1..835 17..851 4175 100 Plus
CG5973-PB 936 CG5973-RB 1..835 17..851 4175 100 Plus
CG5973-PC 936 CG5973-RC 1..835 17..851 4175 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:58:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG5973-RF 1463 CG5973-RF 231..1066 16..851 4180 100 Plus
CG5973-RE 2204 CG5973-RE 359..1194 16..851 4180 100 Plus
CG5973-RG 1313 CG5973-RG 81..916 16..851 4180 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:58:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7443645..7443832 16..203 940 100 Plus
2L 23513712 2L 7444463..7444643 574..754 905 100 Plus
2L 23513712 2L 7444059..7444213 295..449 775 100 Plus
2L 23513712 2L 7444273..7444399 450..576 635 100 Plus
2L 23513712 2L 7444708..7444805 754..851 490 100 Plus
2L 23513712 2L 7443894..7443985 204..295 460 100 Plus
Blast to na_te.dros performed on 2015-02-12 05:58:21 has no hits.

BS05151.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:03:09 Download gff for BS05151.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5973-PC 1..835 17..851 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:29:12 Download gff for BS05151.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5973-PC 1..835 17..851 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:39:02 Download gff for BS05151.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5973-RD 1693..2533 9..851 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:58:16 Download gff for BS05151.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5973-RG 76..916 9..851 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:58:16 Download gff for BS05151.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 7443640..7443832 9..203 97 -> Plus
2L 7443894..7443985 204..295 100 -> Plus
2L 7444060..7444213 296..449 100 -> Plus
2L 7444273..7444398 450..575 100 -> Plus
2L 7444465..7444643 576..754 100 -> Plus
2L 7444709..7444805 755..851 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:39:02 Download gff for BS05151.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7443640..7443832 9..203 97 -> Plus
arm_2L 7443894..7443985 204..295 100 -> Plus
arm_2L 7444060..7444213 296..449 100 -> Plus
arm_2L 7444273..7444398 450..575 100 -> Plus
arm_2L 7444465..7444643 576..754 100 -> Plus
arm_2L 7444709..7444805 755..851 100   Plus

BS05151.complete Sequence

968 bp (968 high quality bases) assembled on 2005-09-12

GenBank Submission: FJ635064

> BS05151.complete
GAAGTTATCAGTCGACATGGGCAAGGCAGAGTGCATTAGCTACGATGAGC
ACAAGTTGCCCTACATCGATCTGGGCTCGGCACAGATCCGCATGGAGAAG
GAACAAGCGCCGGAATGGGCACTGAAGAAGGCACAGGATGAGTTGCGGGA
AGTGCCCGGCGTCAAGGAGCAGGCCATCAAGGAACTCAGGGAACTCATTC
AAAATGAAAAGTACCTGAACCTGCCATTGGATGATGAGTATATGATGATG
TTCCTGCGTCCCACCCATTACTATCCAGAAAGTGCCTTGAAAAGGCTCAA
GAACTTTTATCACATGAAATTGAAGTATGGAGCCGCTTGCGAGAACATAA
TCCCCAGCAAGTTGAGAAACGTTTTCGAGGCAAATATTCTGAATTTGCTG
CCCCAAAGAGATCAACACGGCCGTCGGCTTTTGGTGCTGGAAGCTGGCAA
AAAATGGAAGCCATCGCAAGTGCCCTTGGTGGATCTATTCCGCGGCATTC
AATTGACCGTACTGGGTTCTATGGTGGAGCCCTACTCACAAATTTGCGGC
TCAGTTGTCATTATCGATATGGAAGGGCTGCCACTTAGCCACATTACACA
ATTTACACCGTCATTTGCCGCCATGTTGCTGGATTACATTCAAGAATGCA
TCTGCATGCGTTTGAAAGCAGTTCACATAGTGAATAATTCATATATATTC
AATATGCTCTTTGCCGTATTCAAGCCATTCATTCGCGAAAAGCTGCGCAA
GAGGATCTTCTTCCATGGCAAGGACTACAAGTCCCTGATCTCCCATATTG
AGGCGAAGGCTTTGCCTCCGAAATACGGTGGTTCTGCCACATGGGAACTG
CCACACGGCAAAGTTTTGGGCGAATTCTTTGAGTGCTATTCCAAGGATTA
TGAACTGGCTGACAGCTATGGGTATACTGAGGGGTATAAGATGAAGAAGT
AAAAGCTTTCTAGACCAT

BS05151.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG5973-RF 936 CG5973-PF 1..936 17..952 4680 100 Plus
CG5973-RE 936 CG5973-PE 1..936 17..952 4680 100 Plus
CG5973-RG 936 CG5973-PG 1..936 17..952 4680 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:51:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG5973-RF 1463 CG5973-RF 231..1167 16..952 4685 100 Plus
CG5973-RE 2204 CG5973-RE 359..1295 16..952 4685 100 Plus
CG5973-RG 1313 CG5973-RG 81..1017 16..952 4685 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:51:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7443645..7443832 16..203 940 100 Plus
2L 23513712 2L 7444463..7444643 574..754 905 100 Plus
2L 23513712 2L 7444059..7444213 295..449 775 100 Plus
2L 23513712 2L 7444708..7444859 754..905 760 100 Plus
2L 23513712 2L 7444273..7444399 450..576 635 100 Plus
2L 23513712 2L 7443894..7443985 204..295 460 100 Plus
2L 23513712 2L 7444927..7444973 906..952 235 100 Plus
Blast to na_te.dros performed on 2014-11-26 21:51:50 has no hits.

BS05151.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:50:13 Download gff for BS05151.complete
Subject Subject Range Query Range Percent Splice Strand
CG5973-RC 1..936 17..952 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:38:53 Download gff for BS05151.complete
Subject Subject Range Query Range Percent Splice Strand
CG5973-RC 86..1030 9..955 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:39:11 Download gff for BS05151.complete
Subject Subject Range Query Range Percent Splice Strand
CG5973-RD 1699..2632 17..950 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:50:14 Download gff for BS05151.complete
Subject Subject Range Query Range Percent Splice Strand
CG5973-RC 86..1030 9..955 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:25 Download gff for BS05151.complete
Subject Subject Range Query Range Percent Splice Strand
CG5973-RG 82..1015 17..950 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:44:25 Download gff for BS05151.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7443646..7443832 17..203 100 -> Plus
2L 7443894..7443985 204..295 100 -> Plus
2L 7444060..7444213 296..449 100 -> Plus
2L 7444273..7444398 450..575 100 -> Plus
2L 7444465..7444643 576..754 100 -> Plus
2L 7444709..7444859 755..905 100 -> Plus
2L 7444927..7444971 906..950 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:39:11 Download gff for BS05151.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7443646..7443832 17..203 100 -> Plus
arm_2L 7443894..7443985 204..295 100 -> Plus
arm_2L 7444060..7444213 296..449 100 -> Plus
arm_2L 7444273..7444398 450..575 100 -> Plus
arm_2L 7444465..7444643 576..754 100 -> Plus
arm_2L 7444709..7444859 755..905 100 -> Plus
arm_2L 7444927..7444971 906..950 100   Plus

BS05151.pep Sequence

Translation from 16 to 951

> BS05151.pep
MGKAECISYDEHKLPYIDLGSAQIRMEKEQAPEWALKKAQDELREVPGVK
EQAIKELRELIQNEKYLNLPLDDEYMMMFLRPTHYYPESALKRLKNFYHM
KLKYGAACENIIPSKLRNVFEANILNLLPQRDQHGRRLLVLEAGKKWKPS
QVPLVDLFRGIQLTVLGSMVEPYSQICGSVVIIDMEGLPLSHITQFTPSF
AAMLLDYIQECICMRLKAVHIVNNSYIFNMLFAVFKPFIREKLRKRIFFH
GKDYKSLISHIEAKALPPKYGGSATWELPHGKVLGEFFECYSKDYELADS
YGYTEGYKMKK*

BS05151.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:45:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG5973-PF 311 CG5973-PF 1..311 1..311 1641 100 Plus
CG5973-PE 311 CG5973-PE 1..311 1..311 1641 100 Plus
CG5973-PG 311 CG5973-PG 1..311 1..311 1641 100 Plus
CG5973-PD 311 CG5973-PD 1..311 1..311 1641 100 Plus
CG5973-PC 311 CG5973-PC 1..311 1..311 1641 100 Plus