Clone BS05203 Report

Search the DGRC for BS05203

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:52
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG5808-RA
Protein status:BS05203.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05203.3prime Sequence

834 bp (787 high quality bases) assembled on 2005-09-14

> BS05203.3prime
ATGGTCTAGAAAGCTTTTAATTTCTATTATGTTCCTTCTTCGATTTGTGA
CTACTCTTTGACTTGGACTTCTTTTGCTTGGATTTTGTACTCTTTTTGCG
TTTGCTGCGATCGTCCGACGATGAGGAGCTGCTAGAGCTGTCCTCGGAAC
TATCTGAAGATGTGGAGTCGCTTTCGGATTCCGAGGAACTTTCACTCGAA
TCTGAACTGCTGCTAGCTGCTCGTTTCGATTTCTTGGCTTGCTTTTTGCT
CTTTTCCACTGAAAGTTTTCTTTTCTTCTCATGACTCTTGTTAGGGCTTG
AGTGAGTGTCCATTCTATGGTCTTCCCGGTTCCTGGATTGTTGCCTCCGC
TCTGGCGATCTTCTTTGATTCCTGGAGGTTTCTCTATGCGATCTCTCATC
GTTACGTCTTCCTTCTTGAGGGGAATGGAATCGCCTGCTGTCATTGCGAT
CTCTGTTTTGAGTCGGTCTTTTTCCAGTTTGATCTCTAGATCTAGAACGC
CTTCTCTCATTTTGTTCCCTTGGCCTAGAGCGTCTTCTTTCCTTTTGGTC
CCTTGACCTAGAACGTCTTCCTAATTGGTCTCTAGGCCTAGAAGGCCTTC
TCTCTTCTCGATCTCTTGACCTAGAGTACCTTCTATGTGTTGCATCCCGA
GACCTCGATGACCTTTTTTCATTGCGATTCCTTTCGCGATTTGAGTTCTC
TCTGACTGACTCATTTTGCGATTTTTTCGATCTATAAACACTTTTTTCAT
CTTTTTCCTTCGATCTGGTGCGTCTTTGCAAATTCTTTCGAACATCTCGT
TCGCTTTGCTCCTGGTGTCGCTGTTCTCTCGCTT

BS05203.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:59:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG5808-PA 1962 CG5808-RA 1145..1962 834..17 4065 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:17:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG5808-RA 2043 CG5808-RA 1200..2018 834..16 4080 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:17:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24815311..24815808 337..834 2460 99.6 Plus
3R 32079331 3R 24814928..24815258 16..346 1640 99.7 Plus
Blast to na_te.dros performed on 2015-02-12 04:17:24 has no hits.

BS05203.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:04:22 Download gff for BS05203.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5808-PA 1145..1962 17..834 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:30:47 Download gff for BS05203.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5808-PA 1145..1962 17..834 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:24:26 Download gff for BS05203.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5808-RA 1200..2018 16..834 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:04:17 Download gff for BS05203.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5808-RA 1200..2018 16..834 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:04:17 Download gff for BS05203.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 24814928..24815256 16..344 99 <- Plus
3R 24815319..24815808 345..834 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:24:26 Download gff for BS05203.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20640650..20640978 16..344 99 <- Plus
arm_3R 20641041..20641530 345..834 100   Plus

BS05203.5prime Sequence

918 bp (728 high quality bases) assembled on 2005-12-02

> BS05203.5prime
GAAGTTATCAGTCGACATGTCGGTGGTTATAGAAACCACGATGGGTGACC
TGACCGTCGACCTGTTCATCAGCGAGCGCCCAATTGCCTGCCTAAACTTC
CTCAAGCTGTGCCGGCTGAAGTACTATAACTTCAATCTATTTCACACGGT
GCAGCAGGGATTCATCGCCCAAACAGGCGATCCGAGTGGAGCTGGAGACG
GCGGATCCTCCATCTGGGGCGTGGTGGAGGGTCCGCAAAAGCGCTTCTTC
GAGGCGGAGTTCCTGCCCAAGATTAACCACTCCAGTGCCGGAATGCTATC
GCTGGTCAGTGCAGGCAAGAATCTGGTGGGATCCCAGTTCTTCCTCACGC
TGGGTGAGAACCTAACATCGCTGGACGGCAACCACTGCGTTATCGGTGAA
GTGGTGGAAGGTCACGAGGTGCTGCGCAAGCTAAACGACGCCATTGTTGA
CGACAGCTTCCGTCCTTACCAGGATATACGCATCACACACACTGTTGTGC
TTGAGGATCCGTTTCCTAATCCGCGCGGCCTTCAGGCTCCAAGTCGCTCA
CCTTCGCCCAGTGCGGAGCGTCTGAAGAACGGGCGCATCGCTGCCGACGA
GGATATCGATGACACTGATGGCATGACCGCGGAGGAGATGCAGGAGATGC
TGGCCGAACGAGAGGCCAAGGCTCGAGCCACAATCCTTGAGATTGTCGGC
GATTTACCCGATGCAGACATGGCTCCGCCAGAAAATGTCTTGTTTGTGTG
CAAACTCAATCCTGTTACAACCGACGATGATCTGGAGATAATCTTTAGTA
GCTTCGGCGTGCTTAAAGGATGTGAGGTGATTCGCGACCCGCAAAACGGA
GATTCTCTGCAATATGCTTTTGTGGAGTTCGAGGATCAAAAATCTTGTGA
GGCCGCATATTTCAAAAT

BS05203.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:59:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG5808-PA 1962 CG5808-RA 1..823 17..839 4115 100 Plus
CG5808-PA 1962 CG5808-RA 832..902 848..918 355 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:02:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG5808-RA 2043 CG5808-RA 56..957 17..918 4465 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 00:02:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24816051..24816952 918..17 4435 99.4 Minus
Blast to na_te.dros performed on 2015-02-10 00:02:27 has no hits.

BS05203.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:04:23 Download gff for BS05203.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5808-PA 1..902 17..918 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:30:48 Download gff for BS05203.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5808-PA 1..902 17..918 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:35:05 Download gff for BS05203.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5808-RA 49..957 12..918 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 01:00:55 Download gff for BS05203.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5808-RA 49..957 12..918 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 01:00:55 Download gff for BS05203.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24816051..24816959 12..918 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:35:05 Download gff for BS05203.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20641773..20642681 12..918 99   Minus

BS05203.complete Sequence

1994 bp assembled on 2008-01-02

GenBank Submission: FJ635068

> BS05203.complete
GAAGTTATCAGTCGACATGTCGGTGGTTATAGAAACCACGATGGGTGACC
TGACCGTCGACCTGTTCATCAGCGAGCGCCCAATTGCCTGCCTAAACTTC
CTCAAGCTGTGCCGGCTGAAGTACTATAACTTCAATCTATTTCACACGGT
GCAGCAGGGATTCATCGCCCAAACAGGCGATCCGAGTGGAGCTGGAGACG
GCGGATCCTCCATCTGGGGCGTGGTGGAGGGTCCGCAAAAGCGCTTCTTC
GAGGCGGAGTTCCTGCCCAAGATTAACCACTCCAGTGCCGGAATGCTATC
GCTGGTCAGTGCAGGCAAGAATCTGGTGGGATCCCAGTTCTTCCTCACGC
TGGGTGAGAACCTAACATCGCTGGACGGCAACCACTGCGTTATCGGTGAA
GTGGTGGAAGGTCACGAGGTGCTGCGCAAGCTAAACGACGCCATTGTTGA
CGACAGCTTCCGTCCTTACCAGGATATACGCATCACACACACTGTTGTGC
TTGAGGATCCGTTTCCTAATCCGCGCGGCCTTCAGGCTCCAAGTCGCTCA
CCTTCGCCCAGTGCGGAGCGTCTGAAGAACGGGCGCATCGCTGCCGACGA
GGATATCGATGACACTGATGGCATGACCGCGGAGGAGATGCAGGAGATGC
TGGCCGAACGAGAGGCCAAGGCTCGAGCCACAATCCTTGAGATTGTCGGC
GATTTACCCGATGCAGACATGGCTCCGCCAGAAAATGTCTTGTTTGTGTG
CAAACTCAATCCTGTTACAACCGACGATGATCTGGAGATAATCTTTAGTA
GCTTCGGCGTGCTTAAAGGATGTGAGGTGATTCGCGACCGCAAAACGGGA
GATTCTCTGCAATATGCTTTTGTGGAGTTCGAGGATCAAAAATCTTGTGA
GGCCGCATATTTCAAAATGGATAATGTGCTTATCGACGATCGACGCATCC
ACGTGGACTTCTCCCAATCCGTTTCAAAGGTCACCTGGCGGGGCAAAGGA
CGTGGTATTGAGGGCGACTATAGAAAGCTGGATTTTAACAATTTGCGAGA
CGACAAAGATCACAGGAAACCAAACAATGGCCGGTCCAGAACAGAAGACC
ATAAGGAGCGCAACAGGACGGAAGATTTTCGAAATAGGATGAGCTCTGCA
GAGCGAAGAAAAGCGAGAGAACAGCGACACCAGGAGCAAAGCGAACGAGA
TGTTCGAAAGAATTTGCAAAGACGCACCAGATCGAAGGAAAAAGATGAAA
AAAGTGTTTATAGATCGAAAAAATCGCAAAATGAGTCAGTCAGAGAGAAC
TCAAATCGCGAAAGGAATCGCAATGAAAAAAGGTCATCGAGGTCTCGGGA
TGCAACACATAGAAGGTACTCTAGGTCAAGAGATCGAGAAGAGAGAAGGC
CTTCTAGGCCTAGAGACCAATTAGGAAGACGTTCTAGGTCAAGGGACCAA
AAGGAAAGAAGACGCTCTAGGCCAAGGGAACAAAATGAGAGAAGGCGTTC
TAGATCTAGAGATCAAACTGGAAAAAGACCGACTCAAAACAGAGATCGCA
ATGACAGCAGGCGATTCCATTCCCCTCAAGAAGGAAGACGTAACGATGAG
AGATCGCATAGAGAAACCTCCAGGAATCAAAGAAGATCGCCAGAGCGGAG
GCAACAATCCAGGAACCGGGAAGACCATAGAATGGACACTCACTCAAGCC
CTAACAAGAGTCATGAGAAGAAAAGAAAACTTTCAGTGGAAAAGAGCAAA
AAGCAAGCCAAGAAATCGAAACGAGCAGCTAGCAGCAGTTCAGATTCGAG
TGAAAGTTCCTCGGAATCCGAAAGCGACTCCACATCTTCAGATAGTTCCG
AGGACAGCTCTAGCAGCTCCTCATCGTCGGACGATCGCAGCAAACGCAAA
AAGAGTACAAAATCCAAGCAAAAGAAGTCCAAGTCAAAGAGTAGTCACAA
ATCGAAGAAGAAACATAATAGAAATTAAAAGCTTTCTAGACCAT

BS05203.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:39:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG5808-RA 1962 CG5808-PA 1..1962 17..1978 9810 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG5808-RA 2043 CG5808-RA 56..2018 17..1979 9815 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:39:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24815311..24816952 1658..17 8180 99.9 Minus
3R 32079331 3R 24814928..24815258 1979..1649 1655 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:39:54 has no hits.

BS05203.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:05:39 Download gff for BS05203.complete
Subject Subject Range Query Range Percent Splice Strand
CG5808-RA 1..1962 17..1978 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:34:23 Download gff for BS05203.complete
Subject Subject Range Query Range Percent Splice Strand
CG5808-RA 56..2015 17..1976 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:29:07 Download gff for BS05203.complete
Subject Subject Range Query Range Percent Splice Strand
CG5808-RA 56..2015 17..1976 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:05:39 Download gff for BS05203.complete
Subject Subject Range Query Range Percent Splice Strand
CG5808-RA 49..2018 12..1979 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:35:54 Download gff for BS05203.complete
Subject Subject Range Query Range Percent Splice Strand
CG5808-RA 56..2015 17..1976 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:35:54 Download gff for BS05203.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24814931..24815256 1651..1976 100 <- Minus
3R 24815319..24816952 17..1650 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:29:07 Download gff for BS05203.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20640653..20640978 1651..1976 100 <- Minus
arm_3R 20641041..20642674 17..1650 100   Minus

BS05203.pep Sequence

Translation from 16 to 1977

> BS05203.pep
MSVVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFI
AQTGDPSGAGDGGSSIWGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAG
KNLVGSQFFLTLGENLTSLDGNHCVIGEVVEGHEVLRKLNDAIVDDSFRP
YQDIRITHTVVLEDPFPNPRGLQAPSRSPSPSAERLKNGRIAADEDIDDT
DGMTAEEMQEMLAEREAKARATILEIVGDLPDADMAPPENVLFVCKLNPV
TTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFK
MDNVLIDDRRIHVDFSQSVSKVTWRGKGRGIEGDYRKLDFNNLRDDKDHR
KPNNGRSRTEDHKERNRTEDFRNRMSSAERRKAREQRHQEQSERDVRKNL
QRRTRSKEKDEKSVYRSKKSQNESVRENSNRERNRNEKRSSRSRDATHRR
YSRSRDREERRPSRPRDQLGRRSRSRDQKERRRSRPREQNERRRSRSRDQ
TGKRPTQNRDRNDSRRFHSPQEGRRNDERSHRETSRNQRRSPERRQQSRN
REDHRMDTHSSPNKSHEKKRKLSVEKSKKQAKKSKRAASSSSDSSESSSE
SESDSTSSDSSEDSSSSSSSSDDRSKRKKSTKSKQKKSKSKSSHKSKKKH
NRN*

BS05203.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:38:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG5808-PA 653 CG5808-PA 1..653 1..653 3355 100 Plus
CG7747-PA 517 CG7747-PA 282..496 3..235 334 34.9 Plus
CG2839-PA 826 CG2839-PA 395..712 344..652 321 25.5 Plus
CG2839-PA 826 CG2839-PA 448..749 347..641 310 26.1 Plus
CG2839-PA 826 CG2839-PA 419..723 344..652 308 24.4 Plus
CG2839-PA 826 CG2839-PA 360..687 336..652 307 23.5 Plus
CG2839-PA 826 CG2839-PA 464..772 344..649 306 28.1 Plus
CG2839-PA 826 CG2839-PA 440..738 344..649 304 23.6 Plus
CG2839-PA 826 CG2839-PA 312..621 344..652 300 24.7 Plus
CG2839-PA 826 CG2839-PA 348..670 344..652 296 24.2 Plus
CG7971-PG 1062 CG7971-PG 186..562 273..649 293 27.3 Plus
CG2839-PA 826 CG2839-PA 265..568 341..649 286 22.1 Plus
CG2839-PA 826 CG2839-PA 336..639 344..649 285 21.1 Plus
CG2839-PA 826 CG2839-PA 288..585 344..649 279 22.1 Plus
Cypl-PA 176 CG13892-PA 23..168 3..156 278 39 Plus
CG2839-PA 826 CG2839-PA 494..806 344..647 274 24.1 Plus
CG2839-PA 826 CG2839-PA 263..528 386..649 233 22.5 Plus
CG2839-PA 826 CG2839-PA 255..495 410..649 199 18.9 Plus
CG2839-PA 826 CG2839-PA 269..463 453..652 173 19.8 Plus