Clone Sequence Records
BS05223.complete Sequence
3275 bp assembled on 2009-12-07
GenBank Submission: KX795331
> BS05223.complete
GAAGTTATCAGTCGACATGTCTGCGAAGACTTCGGTGTGGCTGGTGTTCT
TTTGCGCCCTCGGCTGCCTGATTCACGATGCCGATTTGCGGAGTATTCAA
CCAAAAGCATCCCAGTGCGGCTATCAGAGCTGCCATCCAACCAAACCCAA
CATGTTGAACGTGCACCTGGTGGCCCACACACATGACGATGTGGGATGGC
TGAAGACCGTTGACCAATACTACTATGGCAGCGAGACCAAGATCCAAAAG
GCTGGAGTCCAGTACATAATCGATTCGGTTGTGGAGGCTCTGCTCAGGGA
TCCCGAGAAGCGTTTCATCTATGTGGAATCTGCCTTCTTCTTCAAGTGGT
GGAAGGAGCAGAAGCCCAAGGTCCAGGAGGCAGTAAAGATGCTGGTGGAG
CAGGGAAGACTCGAATTTATTGGCGGCGCCTGGAGCATGAATGACGAGGC
CACCACCCATTACCAGAGTGTGATTGATCAGTTCTCCTGGGGATTGAGAC
TTTTGAATGATACCTTTGGTGAGTGCGGACGTCCGCGTGTTGGATGGCAA
ATAGATCCCTTTGGTCATTCCCGTGAAATGGCATCCATGTTTGCGCAAAT
GGGTTTCGATGGCATGTTCTTCGGTAGACTGGACTACCAGGATAAGGACG
AGCGTCTGATGACCAAAAATGCAGAGATGATATGGCATGGATCAGCGAAT
TTGGGAGAGGAAGCGGATCTGTTCAGTGGCGCCCTCTACAACAACTACCA
GGCACCAGATGGCTTCTGCTTCGATATCCTATGCAACGATGCACCCATAA
TCGATGGCAAACACAGTCCCGACAATAATGTTAAAGAGCGCATCGATACG
TTTTTGGATTTCGCCAAGACCCAATCGCAATACTACCGCACCAACAATAT
CATTGTCACAATGGGCGGTGATTTTACATACCAGGCTGCTCAAGTTTACT
ATAAGAACCTCGACAAGTTGATACGATATGGCAATGAACGCCAGGCAAAT
GGTTCGAATATCAATCTTCTATACTCCACTCCATCGTGCTATCTGAAATC
CCTGCACGATGCCGGTATCACCTGGCCAACCAAGAGCGACGACTTCTTCC
CATACGCTTCCGATCCTCATGCTTACTGGACGGGATATTTCACATCGCGA
CCCACCTTGAAGCGATTCGAACGGGATGGCAATCATTTCCTGCAGGTCTG
CAAGCAGTTGAGTGCCCTGGCGCCCAAGAAACCCGAAGAATTCGATCCCC
ACTTGACCTTCATGAGGGAAACGCTCGGAATAATGCAGCATCACGATGCC
ATAACTGGAACAGAGAAGGAAAAGGTGGCTCTGGACTATGCCAAGCGGAT
GAGTGTTGCCTTCAGAGCTTGTGGAGCTACCACTCGTAATGCCTTGAATC
AATTGACGGTGCAATCGAAGGATAATGTCAAGGATACGTCGGCCAAATAT
GTGTTTGAGTTCAAAACGTGTGCCCTACTAAATATCACCTCGTGTCCCGT
GTCCGAGGCGAACGATAGATTTGCTCTAACCCTCTACAATCCACTGGCTC
ACACGGTTAATGAGTATGTGAGGATTCCTGTGCCATATTCCAACTACAGG
ATCATCGATAACAAGGGTGTTACTCTGGAAAGCCAAGCTGTTCCGATTCC
CCAAGTGCTGATCGACATTAAGCACAGAAATTCCACAGCCAAATACGAAA
TTGTTTTCCTAGCCACCAATATTCCAGCTTTGGGATACCGTACATACTAT
GTTGAAAAACTGGATAGTACCGAGGGTAATACTAGATCAAAGGCTTTGCC
GAAAAGAACCTCCAGCGTTACAGTGATTGGAAATAGTCACATTCAACTTG
GTTTCGACACCAATGGTTTCCTTTCCGAAGTCACTGCTGATGGCCTAACC
AGATTGGTCAGTCAGGAGTTCCTATTCTATGAGGGTGCTGTTGGAAACAA
CGCGGAGTTCCTGAATCGATCATCTGGTGCCTATATCTTCCGACCCAACG
AGAACAAGATTCACTTTGCCACCGATCAAGTCGAAATTGAAGTCTACAAG
GGTGATCTGGTTCATGAGGTGCATCAGAAGTTCAACGATTGGATTAGCCA
GGTGGTGCGTGTTTACAACAAGGATTCATACGCCGAATTCGAATGGTTGG
TTGGACCCATTCCCATTGATGATGGCATTGGCAAGGAGGTGATTACTCGC
TTCAACTCTGACATCGCTTCGGATGGCATTTTCCGCACCGATTCAAATGG
TCGCGAGATGATCAAGAGGAAAATCAACCATCGCGATACGTGGAGTGTGA
AAATCAACGAAGCCGTTGCTGGCAATTACTATCCCATTACGACTAAAATA
GATGTGGAGGATGACACAGCCCGCATGGCCATACTTACGGATAGAGCCCA
GGGTGGTAGCTCCTTGAAAGACGGATCCTTGGAACTGATGGTTCACCGTC
GTCTGTTGAAGGACGATGCCTTTGGTGTGGGCGAGGCCTTGAATGAAACC
GAGTATGGCGATGGACTGATTGCCCGAGGCAAGCATCATCTGTTCTTCGG
CAAGTCGACGGATCGGGAAGGTGTTTCCCTCAAGGGAATCGAGAGGCTAA
CCCAGCTGGAGAAACTGCTGCCCACATGGAAGTTCTTTAGCAATATGGAG
GATTACAGTGCCGATGAATGGCAGACAGCTTTCACCAATATCTTTAGTGG
AATTTCATTGGTTCTGCCGAAGCCCGTGCATCTGCTCACCTTGGAGCCCT
GGCATGAGAACCAACTCCTTGTGCGCTTCGAGCACATCATGGAGAACGGC
GAGGATGCATCCTACTCCCAGCCCGTGCAGTTCAATGTCAAGAACGTGCT
GAGTGCCTTCGATGTCGAGGGCATCCGTGAAACGACTCTGGATGGCAATG
CCTGGCTGGACGAAAGTCGACGACTTCAGTTTGCGCCGGATCCTGAAGAA
GCCGCGTTCAACACGTATGCCACATTCTCGCAACCCGCCGAATCCGTTCA
CCTACTAAGTGCCGAGAAGCCCATGTTGGGTGTTAAGTACGCCGACGAAG
CCTTGCCAGCTGGACAGCTGGGTGCCGAGAGCAATCGCATTAGGCGCGAA
ACAGAAACGCGACAGGAGAAAAAGGACGAGGGACGCAGCTCCAAGTCGAC
TGAGGGTCCTTACAACTCCTTCAAGTCAGATAGTAGCAACCAGGAATACA
TTATCGAGCTGAGCCCAATGGAAATCAGAACATTCATTGTATACCTAACA
CCAGCGTAAAAGCTTTCTAGACCAT
BS05223.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:31:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
LM408-RA | 3243 | CG6206-PA | 1..3243 | 17..3259 | 16215 | 100 | Plus |
LM408-RB | 3243 | CG6206-PB | 1..3243 | 17..3259 | 15360 | 98.2 | Plus |
CG9466-RB | 2949 | CG9466-PB | 85..575 | 131..621 | 370 | 71.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:31:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
LM408-RA | 3499 | CG6206-RA | 195..3439 | 17..3261 | 16225 | 100 | Plus |
LM408-RB | 3499 | CG6206-RB | 195..3439 | 17..3261 | 15370 | 98.2 | Plus |
CG9466-RB | 3074 | CG9466-RB | 152..642 | 131..621 | 370 | 71.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:31:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10459879..10460522 | 975..1618 | 3220 | 100 | Plus |
2L | 23513712 | 2L | 10461844..10462412 | 2693..3261 | 2845 | 100 | Plus |
2L | 23513712 | 2L | 10461342..10461793 | 2249..2700 | 2230 | 99.6 | Plus |
2L | 23513712 | 2L | 10460869..10461282 | 1838..2251 | 2070 | 100 | Plus |
2L | 23513712 | 2L | 10458444..10458818 | 124..498 | 1875 | 100 | Plus |
2L | 23513712 | 2L | 10460580..10460801 | 1616..1837 | 1110 | 100 | Plus |
2L | 23513712 | 2L | 10458878..10459086 | 497..705 | 1045 | 100 | Plus |
2L | 23513712 | 2L | 10459139..10459280 | 700..841 | 695 | 99.3 | Plus |
2L | 23513712 | 2L | 10459384..10459517 | 842..975 | 670 | 100 | Plus |
2L | 23513712 | 2L | 10457852..10457962 | 17..127 | 555 | 100 | Plus |
2L | 23513712 | 2L | 8775820..8776050 | 361..131 | 270 | 74.5 | Minus |
2L | 23513712 | 2L | 10455646..10455836 | 328..138 | 220 | 74.3 | Minus |
2L | 23513712 | 2L | 8775501..8775615 | 621..507 | 215 | 79.1 | Minus |
2L | 23513712 | 2L | 10455321..10455414 | 602..509 | 215 | 81.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:31:23 has no hits.
BS05223.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:51:00 Download gff for
BS05223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6206-RA | 197..3437 | 17..3257 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:03 Download gff for
BS05223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LM408-RA | 195..3435 | 17..3257 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:24:21 Download gff for
BS05223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6206-RA | 197..3437 | 17..3257 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:13:11 Download gff for
BS05223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LM408-RA | 195..3435 | 17..3257 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:13:11 Download gff for
BS05223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10457852..10457962 | 17..127 | 100 | -> | Plus |
2L | 10458448..10458818 | 128..498 | 100 | -> | Plus |
2L | 10458880..10459085 | 499..704 | 100 | -> | Plus |
2L | 10459144..10459280 | 705..841 | 100 | -> | Plus |
2L | 10459384..10459517 | 842..975 | 100 | -> | Plus |
2L | 10459880..10460520 | 976..1616 | 100 | -> | Plus |
2L | 10460581..10460801 | 1617..1837 | 100 | -> | Plus |
2L | 10460869..10461280 | 1838..2249 | 100 | -> | Plus |
2L | 10461343..10461785 | 2250..2692 | 100 | -> | Plus |
2L | 10461844..10462408 | 2693..3257 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:03 Download gff for
BS05223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10459384..10459517 | 842..975 | 100 | -> | Plus |
arm_2L | 10457852..10457962 | 17..127 | 100 | -> | Plus |
arm_2L | 10458448..10458818 | 128..498 | 100 | -> | Plus |
arm_2L | 10458880..10459085 | 499..704 | 100 | -> | Plus |
arm_2L | 10459144..10459280 | 705..841 | 100 | -> | Plus |
arm_2L | 10459880..10460520 | 976..1616 | 100 | -> | Plus |
arm_2L | 10460581..10460801 | 1617..1837 | 100 | -> | Plus |
arm_2L | 10460869..10461280 | 1838..2249 | 100 | -> | Plus |
arm_2L | 10461343..10461785 | 2250..2692 | 100 | -> | Plus |
arm_2L | 10461844..10462408 | 2693..3257 | 100 | | Plus |
BS05223.3prime Sequence
927 bp (814 high quality bases) assembled on 2005-12-02
> BS05223.3prime
ATGGTCTAGAAAGCTTTTACGCTGGTGTTAGGTATACAATGAATGTTCTG
ATTTCCATTGGGCTCAGCTCGATAATGTATTCCTGGTTGCTACTATCTGA
CTTGAAGGAGTTGTAAGGACCCTCAGTCGACTTGGAGCTGCGTCCCTCGT
CCTTTTTCTCCTGTCGCGTTTCTGTTTCGCGCCTAATGCGATTGCTCTCG
GCACCCAGCTGTCCAGCTGGCAAGGCTTCGTCGGCGTACTTAACACCCAA
CATGGGCTTCTCGGCACTTAGTAGGTGAACGGATTCGGCGGGTTGCGAGA
ATGTGGCATACGTGTTGAACGCGGCTTCTTCAGGATCCGGCGCAAACTGA
AGTCGTCGACTTTCGTCCAGCCAGGCATTGCCATCCAGAGTCGTTTCACG
GATGCCCTCGACATCGAAGGCACTCAGCACGTTCTTGACATTGAACTGCA
CGGGCTGGGAGTAGGATGCATCCTCGCCGTTCTCCATGATGTGCTCGAAG
CGCACAAGGAGTTGGTTCTCATGCCAGGGCTCCAAGGTGAGCAGATGCAC
GGGCTTCGGCAGAACCAATGAAATTCCACTAAAGATATTGGTGAAAGCTG
TCTGCCATTCATCGGCACTGTAATCCTCCATATTGCTAAAGAACTTCCAT
GTGGGCAGCAGTTTCTCCAGCTGGGTTAGCCTCTCGATTCCCTTGAGGGA
AACACCTTCCCGATCCGTCGACTTGCCGAAGAACAGATGATGCTTGCCTC
GGGCAATCAGTCCATCGCCATACTCGGTTTCATTCAAGGCCTCGCCCACA
CCAAAGGCATCGTCCTTNCACAGACGACGGTGAACCATCAGTTCCAAGGA
TCCGTCTTTCAAGGAGCTACCACCCTGGGCTCTATCCGTAAGTATGGCCA
TGCGGGGCTGTGTCATCCTCCACATCT
BS05223.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:00:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6206-PA | 3243 | CG6206-RA | 2354..3243 | 906..17 | 4406 | 99.7 | Minus |
CG6206-PB | 3243 | CG6206-RB | 2354..3243 | 906..17 | 4406 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:19:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
LM408-RB | 3499 | CG6206-RB | 2528..3439 | 927..15 | 4514 | 99.7 | Minus |
LM408-RA | 3499 | CG6206-RA | 2528..3439 | 927..15 | 4514 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:19:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10461844..10462412 | 583..15 | 2845 | 100 | Minus |
2L | 23513712 | 2L | 10461443..10461793 | 927..576 | 1654 | 98.6 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:19:11 has no hits.
BS05223.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:04:56 Download gff for
BS05223.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6206-PA | 2334..3243 | 17..927 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:31:29 Download gff for
BS05223.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6206-PB | 2334..3243 | 17..927 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:12:56 Download gff for
BS05223.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LM408-RA | 2528..3445 | 10..927 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:38:50 Download gff for
BS05223.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LM408-RA | 2528..3445 | 10..927 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:38:50 Download gff for
BS05223.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10461443..10461785 | 584..927 | 99 | -> | Minus |
2L | 10461844..10462418 | 10..583 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:12:56 Download gff for
BS05223.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10461443..10461785 | 584..927 | 99 | -> | Minus |
arm_2L | 10461844..10462418 | 10..583 | 99 | | Minus |
BS05223.5prime Sequence
888 bp (874 high quality bases) assembled on 2005-12-02
> BS05223.5prime
GAAGTTATCAGTCGACATGTCTGCGAAGACTTCGGTGTGGCTGGTGTTCT
TTTGCGCCCTCGGCTGCCTGATTCACGATGCCGATTTGCGGAGTATTCAA
CCAAAAGCATCCCAGTGCGGCTATCAGAGCTGCCATCCAACCAAACCCAA
CATGTTGAACGTGCACCTGGTGGCCCACACACATGACGATGTGGGATGGC
TGAAGACCGTTGACCAATACTACTATGGCAGCGAGACCAAGATCCAAAAG
GCTGGAGTCCAGTACATAATCGATTCGGTTGTGGAGGCTCTGCTCAGGGA
TCCCGAGAAGCGTTTCATCTATGTGGAATCTGCCTTCTTCTTCAAGTGGT
GGAAGGAGCAGAAGCCCAAGGTCCAGGAGGCAGTAAAGATGCTGGTGGAG
CAGGGAAGACTCGAATTTATTGGCGGCGCCTGGAGCATGAATGACGAGGC
CACCACCCATTACCAGAGTGTGATTGATCAGTTCTCCTGGGGATTGAGAC
TTTTGAATGATACCTTTGGTGAGTGCGGACGTCCGCGTGTTGGATGGCAA
ATAGATCCCTTTGGTCATTCCCGTGAAATGGCATCCATGTTTGCGCAAAT
GGGTTTCGATGGCATGTTCTTCGGTAGACTGGACTACCAGGATAAGGACG
AGCGTCTGATGACCAAAAATGCAGAGATGATATGGCATGGATCAGCGAAT
TTGGGAGAGGAAGCGGATCTGTTCAGTGGCGCCCTCTACAACAACTACCA
GGCACCAGATGGCTTCTGCTTCGATATCCTATGCAACGATGCACCCATAA
TCGATGGCAAACACAGTCCCGACAATAATGTTAAAGAGCGCATCGATACG
TTTTTGGATTTCGCCAAGACCCCATCGCAATACTACCG
BS05223.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:00:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6206-PA | 3243 | CG6206-RA | 1..872 | 17..888 | 4335 | 99.8 | Plus |
CG6206-PB | 3243 | CG6206-RB | 1..825 | 17..841 | 4125 | 100 | Plus |
CG9466-PA | 2949 | CG9466-RA | 484..530 | 530..576 | 160 | 93.6 | Plus |
CG9466-PA | 2949 | CG9466-RA | 139..183 | 185..229 | 150 | 93.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:43:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
LM408-RA | 3499 | CG6206-RA | 195..1066 | 17..888 | 4345 | 99.9 | Plus |
LM408-RB | 3499 | CG6206-RB | 195..1019 | 17..841 | 4125 | 100 | Plus |
CG9466-RB | 3074 | CG9466-RB | 152..642 | 131..621 | 380 | 72.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:42:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10458444..10458818 | 124..498 | 1875 | 100 | Plus |
2L | 23513712 | 2L | 10458878..10459086 | 497..705 | 1045 | 100 | Plus |
2L | 23513712 | 2L | 10459139..10459280 | 700..841 | 695 | 99.3 | Plus |
2L | 23513712 | 2L | 10457852..10457962 | 17..127 | 555 | 100 | Plus |
2L | 23513712 | 2L | 8775820..8776050 | 361..131 | 270 | 74.5 | Minus |
2L | 23513712 | 2L | 10455646..10455836 | 328..138 | 220 | 74.3 | Minus |
2L | 23513712 | 2L | 10459384..10459430 | 842..888 | 220 | 97.9 | Plus |
2L | 23513712 | 2L | 8775501..8775615 | 621..507 | 215 | 79.1 | Minus |
2L | 23513712 | 2L | 10455321..10455414 | 602..509 | 215 | 81.9 | Minus |
Blast to na_te.dros performed on 2015-02-10 20:43:00 has no hits.
BS05223.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:04:57 Download gff for
BS05223.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6206-PA | 1..872 | 17..888 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:31:30 Download gff for
BS05223.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6206-PA | 1..872 | 17..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:43:55 Download gff for
BS05223.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LM408-RA | 189..1066 | 10..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:12:26 Download gff for
BS05223.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LM408-RA | 189..1066 | 10..888 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:12:26 Download gff for
BS05223.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10458880..10459085 | 499..704 | 100 | -> | Plus |
2L | 10459144..10459280 | 705..841 | 100 | -> | Plus |
2L | 10459384..10459430 | 842..888 | 97 | | Plus |
2L | 10457846..10457962 | 10..127 | 97 | -> | Plus |
2L | 10458448..10458818 | 128..498 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:43:55 Download gff for
BS05223.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10459144..10459280 | 705..841 | 100 | -> | Plus |
arm_2L | 10459384..10459430 | 842..888 | 97 | | Plus |
arm_2L | 10457846..10457962 | 10..127 | 97 | -> | Plus |
arm_2L | 10458448..10458818 | 128..498 | 100 | -> | Plus |
arm_2L | 10458880..10459085 | 499..704 | 100 | -> | Plus |
BS05223.pep Sequence
Translation from 16 to 3258
> BS05223.pep
MSAKTSVWLVFFCALGCLIHDADLRSIQPKASQCGYQSCHPTKPNMLNVH
LVAHTHDDVGWLKTVDQYYYGSETKIQKAGVQYIIDSVVEALLRDPEKRF
IYVESAFFFKWWKEQKPKVQEAVKMLVEQGRLEFIGGAWSMNDEATTHYQ
SVIDQFSWGLRLLNDTFGECGRPRVGWQIDPFGHSREMASMFAQMGFDGM
FFGRLDYQDKDERLMTKNAEMIWHGSANLGEEADLFSGALYNNYQAPDGF
CFDILCNDAPIIDGKHSPDNNVKERIDTFLDFAKTQSQYYRTNNIIVTMG
GDFTYQAAQVYYKNLDKLIRYGNERQANGSNINLLYSTPSCYLKSLHDAG
ITWPTKSDDFFPYASDPHAYWTGYFTSRPTLKRFERDGNHFLQVCKQLSA
LAPKKPEEFDPHLTFMRETLGIMQHHDAITGTEKEKVALDYAKRMSVAFR
ACGATTRNALNQLTVQSKDNVKDTSAKYVFEFKTCALLNITSCPVSEAND
RFALTLYNPLAHTVNEYVRIPVPYSNYRIIDNKGVTLESQAVPIPQVLID
IKHRNSTAKYEIVFLATNIPALGYRTYYVEKLDSTEGNTRSKALPKRTSS
VTVIGNSHIQLGFDTNGFLSEVTADGLTRLVSQEFLFYEGAVGNNAEFLN
RSSGAYIFRPNENKIHFATDQVEIEVYKGDLVHEVHQKFNDWISQVVRVY
NKDSYAEFEWLVGPIPIDDGIGKEVITRFNSDIASDGIFRTDSNGREMIK
RKINHRDTWSVKINEAVAGNYYPITTKIDVEDDTARMAILTDRAQGGSSL
KDGSLELMVHRRLLKDDAFGVGEALNETEYGDGLIARGKHHLFFGKSTDR
EGVSLKGIERLTQLEKLLPTWKFFSNMEDYSADEWQTAFTNIFSGISLVL
PKPVHLLTLEPWHENQLLVRFEHIMENGEDASYSQPVQFNVKNVLSAFDV
EGIRETTLDGNAWLDESRRLQFAPDPEEAAFNTYATFSQPAESVHLLSAE
KPMLGVKYADEALPAGQLGAESNRIRRETETRQEKKDEGRSSKSTEGPYN
SFKSDSSNQEYIIELSPMEIRTFIVYLTPA*
BS05223.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:01:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
LM408-PA | 1080 | CG6206-PA | 1..1080 | 1..1080 | 5710 | 100 | Plus |
LM408-PB | 1080 | CG6206-PB | 1..1080 | 1..1080 | 5608 | 98 | Plus |
CG5322-PB | 950 | CG5322-PB | 1..899 | 46..975 | 2350 | 50.5 | Plus |
CG5322-PA | 950 | CG5322-PA | 1..899 | 46..975 | 2350 | 50.5 | Plus |
CG9465-PB | 978 | CG9465-PB | 25..958 | 34..1012 | 2330 | 48.6 | Plus |