Clone Sequence Records
BS05239.3prime Sequence
939 bp (817 high quality bases) assembled on 2005-12-02
> BS05239.3prime
ATGGTCTAGAAAGCTTTTACTGCGATGGCTGGCGCTTGTGGCGCGGTGGC
GAAATCAGGGAGCTTCTTGTTGCATCTCCGCGATTTGGCAGCTTGCTTCG
CAGCATCTGCTCGTGGACATAGATGAGCAGTCCCACATCCCGGTGGCCAG
CCTGCCAGGCGATCTTGAAGGCTGTGCTGCCATCCACATCGGTGACCAGT
GAATCGCACTCGGGATGCGACAGTAGATGCTTGATCACATCCACGCGTCC
GTGCTCGGCGGCGCACATCAGAGCCGTACTGCCGTCCTCGTCCTGGATAT
TAATATCCGCCCCGGCGTCCAGAAGCATATTGACCATGTCCCCGTTACCA
TGCGACACAGCGAGCATCAAAGCGGTCTGGCAGTGCTTCTTGGCCCGTAT
GTTGACATCGGCCATCTTGAACAGTCGCTCGACGACTGTCCGATGGGCGG
GCTGCTTCAGCTTGGCCAACGATACGAGCATCACCGATGTGTATCCGGCG
TTATTCATTTGGTTTACATCGCAAACCTTAGAATCCAGCAGTATGGATAC
CACATCGAAGTTGCCGTGCGAGACTGCATAGTGCATGGCTGTGTTGCCAT
TACTGTCGGACAGGTTGACACAGTACTCCAGCAATGGGATGGACAGCGAT
TCAAAGTAATCTAGATAATCCTCAACCTGATGGGGATCGGATTTGCCAGT
ACTGGAGTTAGTGAACCAATGATCCTGAATGGTCGCCTTGGCCGACTTGA
GACTCTGCGAGGATATGGGTTTGGCGCCCAGCTTCTTCAGCAGCGAGTCG
TTAATGATCTTGAGGGCGTCTTTAAGGCTCTGGGACAACTCGGTTTTTTT
TCGGGGCTCCGAATCCGCCTGGGCCCACTGGTGGAGCTGGGCTTTGGTGG
GCGGCTGTTCGATCACGGTCACTTGGGAGCCCTCGCTCT
BS05239.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:00:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10249-PC | 3906 | CG10249-RC | 2984..3906 | 939..17 | 4565 | 99.7 | Minus |
| CG10249-PA | 3675 | CG10249-RA | 2753..3675 | 939..17 | 4565 | 99.7 | Minus |
| CG10249-PB | 3129 | CG10249-RB | 2207..3129 | 939..17 | 4565 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:16:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10249-RI | 4059 | CG10249-RI | 2639..3562 | 939..16 | 4590 | 99.8 | Minus |
| CG10249-RJ | 1942 | CG10249-RJ | 522..1445 | 939..16 | 4590 | 99.8 | Minus |
| CG10249-RG | 5340 | CG10249-RG | 3920..4843 | 939..16 | 4590 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:16:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14902784..14903031 | 598..845 | 1240 | 100 | Plus |
| 2R | 25286936 | 2R | 14902511..14902723 | 386..598 | 1065 | 100 | Plus |
| 2R | 25286936 | 2R | 14902202..14902405 | 184..387 | 1020 | 100 | Plus |
| 2R | 25286936 | 2R | 14901972..14902141 | 16..185 | 850 | 100 | Plus |
| 2R | 25286936 | 2R | 14903136..14903229 | 846..939 | 440 | 97.9 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:16:05 has no hits.
BS05239.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:05:30 Download gff for
BS05239.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10249-PA | 2753..3675 | 17..939 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:32:12 Download gff for
BS05239.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10249-PB | 2207..3129 | 17..939 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:23:56 Download gff for
BS05239.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10249-RG | 3920..4851 | 9..939 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:58:40 Download gff for
BS05239.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10249-RG | 3920..4851 | 9..939 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:58:40 Download gff for
BS05239.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14901964..14902140 | 9..184 | 98 | <- | Plus |
| 2R | 14902203..14902403 | 185..385 | 100 | <- | Plus |
| 2R | 14902511..14902723 | 386..598 | 100 | <- | Plus |
| 2R | 14902785..14903031 | 599..845 | 100 | <- | Plus |
| 2R | 14903136..14903229 | 846..939 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:23:56 Download gff for
BS05239.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10790016..10790228 | 386..598 | 100 | <- | Plus |
| arm_2R | 10790290..10790536 | 599..845 | 100 | <- | Plus |
| arm_2R | 10789469..10789645 | 9..184 | 98 | <- | Plus |
| arm_2R | 10789708..10789908 | 185..385 | 100 | <- | Plus |
| arm_2R | 10790641..10790734 | 846..939 | 97 | | Plus |
BS05239.5prime Sequence
877 bp (842 high quality bases) assembled on 2005-12-02
> BS05239.5prime
GAAGTTATCAGTCGACATGGGGATTTCAAAATTAGTGAGTGGTCATACCA
TTCCATTCCATTTTCGAAATCGCATATCTGCACGTAAATGTAACCTGTAC
ATTGTATTATTGTTAAAACAGACCTCACACGAAAGCGAACCAGATTCGCC
ACACCCCATTGGCGGAGGAGGGTCGTTGCATATGTCGCAGTCGTACACCA
CCACTCCGTGCTACCGACCGCGTTCGTCATCCGTGCCGCGTTTCACCTAC
GGCAGTATACCGCCTCGATCGGAGTCGCCCTTCGGCACCGCTTCCTCCAC
GTGCTCCTCGCTACGCGGCGGCGTGGAGAGCGATGCTGGTATCTACCATC
AGCGTCATCGGCCGGCGATCAGTCCGCCGGAGACGAGGGCCTTCCTCCAC
GAGGCGCTCGACGAGGTGTGCAGCGATTTCGAGCGGACGCTGGAGCGGAC
TTCCGTAAAGCGACGCAAGTCTCCCTATGGAGCTGGATCCCTGTCCATGG
ATCGGAATAACAACAAACTTAGCCTGAGCATCAGCAATGGCCATGGCGCA
TTGAAGGAGCTCAAGAGTCATCGCCTGGGCAACAGCACGTGGGATCGGCA
CTTTGATGTGGCAGATTCCTGCATTGGCGGCAATCAATCGCCCACGGGCA
CGCCGCGCCCCTTTCTGCGATCCAACACCCTTCCTCTGCGACAGCGACCC
AGTCCGGCGGAGGTCCAATATGAAAGCTACGTGCAGGCCACGGTGGCGGC
CAATGCCAAGTCGCCGGTGGAGCAGCTGGAGAGCGCAAAGTCTCCAGGTG
CTCCGCCACCACCGCCTCCGAGGCGCCACCACCTGTTGGCCACCACGCCC
ACGGGAAAACCCACTTTCAAGGAGGAT
BS05239.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:00:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10249-PA | 3675 | CG10249-RA | 1..861 | 17..877 | 4305 | 100 | Plus |
| CG10249-PC | 3906 | CG10249-RC | 335..1092 | 120..877 | 3790 | 100 | Plus |
| CG10249-PB | 3129 | CG10249-RB | 53..315 | 615..877 | 1315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:18:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10249-RA | 4221 | CG10249-RA | 49..909 | 17..877 | 4305 | 100 | Plus |
| CG10249-RG | 5340 | CG10249-RG | 1271..2028 | 120..877 | 3790 | 100 | Plus |
| CG10249-RD | 4880 | CG10249-RD | 811..1568 | 120..877 | 3790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:17:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14910224..14910821 | 614..17 | 2990 | 100 | Minus |
| 2R | 25286936 | 2R | 14905691..14905955 | 877..613 | 1325 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 01:18:00 has no hits.
BS05239.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:05:31 Download gff for
BS05239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10249-PA | 1..861 | 17..877 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:32:13 Download gff for
BS05239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10249-PA | 1..861 | 17..877 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 20:57:56 Download gff for
BS05239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10249-RA | 45..909 | 10..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:27:10 Download gff for
BS05239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10249-RA | 45..909 | 10..877 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:27:10 Download gff for
BS05239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14905691..14905953 | 615..877 | 100 | <- | Minus |
| 2R | 14910224..14910825 | 10..614 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 20:57:56 Download gff for
BS05239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10793196..10793458 | 615..877 | 100 | <- | Minus |
| arm_2R | 10797729..10798330 | 10..614 | 99 | | Minus |
BS05239.complete Sequence
3707 bp assembled on 2010-05-13
GenBank Submission: KX796829
> BS05239.complete
GAAGTTATCAGTCGACATGGGGATTTCAAAATTAGTGAGTGGTCATACCA
TTCCATTCCATTTTCGAAATCGCATATCTGCACGTAAATGTAACCTGTAC
ATTGTATTATTGTTAAAACAGACCTCACACGAAAGCGAACCAGATTCGCC
ACACCCCATTGGCGGAGGAGGGTCGTTGCATATGTCGCAGTCGTACACCA
CCACTCCGTGCTACCGACCGCGTTCGTCATCCGTGCCGCGTTTCACCTAC
GGCAGTATACCGCCTCGATCGGAGTCGCCCTTCGGCACCGCTTCCTCCAC
GTGCTCCTCGCTACGCGGCGGCGTGGAGAGCGATGCTGGTATCTACCATC
AGCGTCATCGGCCGGCGATCAGTCCGCCGGAGACGAGGGCCTTCCTCCAC
GAGGCGCTCGACGAGGTGTGCAGCGATTTCGAGCGGACGCTGGAGCGGAC
TTCCGTAAAGCGACGCAAGTCTCCCTATGGAGCTGGATCCCTGTCCATGG
ATCGGAATAACAACAAACTTAGCCTGAGCATCAGCAATGGCCATGGCGCA
TTGAAGGAGCTCAAGAGTCATCGCCTGGGCAACAGCACGTGGGATCGGCA
CTTTGATGTGGCAGATTCCTGCATTGGCGGCAATCAATCGCCCACGGGCA
CGCCGCGCCCCTTTCTGCGATCCAACACCCTTCCTCTGCGACAGCGACCC
AGTCCGGCGGAGGTCCAATATGAAAGCTACGTGCAGGCCACGGTGGCGGC
CAATGCCAAGTCGCCGGTGGAGCAGCTGGAGAGCGCAAAGTCTCCAGGTG
CTCCGCCACCACCGCCTCCGAGGCGCCACCACCTGTTGGCCACCACGCCC
ACGGGAAAACCCACTTTCAAGGAGGATCGACCGCAGGAGAATGGTTCCGT
AAGCAGCAGCTCCCTGCAGTCGCCAGTCATCTCGGAAACCGGTCAGACTA
CGGCAGATGCACAAGCTCTGTTCCAGATACGAGAACAAATGGCCCTGAGC
CTGAGGCGTCTTAAGGATCTGGAGGAGCAGGTGAAAGTCATACCCGACAT
GGAGCTGGAACTTAATTCTCTTCGCTCGGAAAAGCAGAAATTGCTGCGCA
GAAACGAGGAGTTGATGCGAAGTCAGCGGCAGACGCCTTCGCCGCCAAGT
CCGGGACTCAAGACTGCCTCACCCGTGCAGTTCACTCCGCAAAGGATCAG
TCCAGTGTCGCTGGAGAGCCTAGGAGCACGCATGCGCAGCAGTTCCACCT
CGGCATCTCCATCTCCAAGCGTTGTCCGTCGAGATGTCTCCACTCAAGCA
GTGGTGCGACCACCTGCCACACGAGATGTGTCCGTTGGCCACCAGCCCAC
CACGAGAAATGTTGGAGTTCAGCCGTCGGAAACTGTCTACTCCAAGGAGG
AGCTGGATAAGAAGGTGGAGCAGGCACTAACCAATGCACAAAAGCAACAA
TTGAGAAAGCTCATCTCTGTGGGCACCCAAATGTATGTGCCCCAGAGGGA
CCAAAAAGATAGTGGAGTGCAAACCACACCGGAACGACCCAAACTCAAGT
ACCATGTGGGAGTCACCGTGAAACCGGCCACAAGGGAGAACTTTACCAGT
TGCAAGCCGGATGTGCGTCATGTGGGCAGCTCTGATGATCGCCTGGATGA
TGTGCTATGCGAAAAATGCGCCGTCAGCAAGAGAAGCGTGGCCTGCGGTC
CGGAAACTCCGGCGGAGAAGGTAAAACCTGCTCCCCAAATGCCCGGACGC
AGCAACACCTTCAGTTTGGGCGAGAATGAGACCGTATCCGTGGTGCGTAA
GACAATTGGATGCCAGACGCCAGTTACCCTGGTTCTCAGTTCTGGAAGTC
AAACCACCACGGCTGTTGTTCGTTCCACCGGAGCCCAGGTTAATCCACAG
CAACAGCACTCTGGCGTCCAGTGTGCAACGGAGCAGGTATCCCGACAGAC
TGATACCAAGGGACTGCAGCGACTCACTCGGAGTCAGACGAAGGCTGAAC
AGGTCTCAGAGTCTGTGCCCCGCCCTACAACCCGTCACACAGCCAGCAAT
ACGGACAAGGTGGAGGAAGCGGAGCCGGCTAAGGTTCGCACAAGCCACTC
CGCCTGCAACACGGAGGAGGTTCGCAAGAGGGATGTGGGCTGTGGCGACA
TCGTCAAGCCACACATCTCCATTGCCTGTGCAGCCAACTACTGTGATTCC
TGCAAGGAGGCCATCCAGGATCTGGCCAGGGGTTTCTCGAAGGCCAGTCC
CACGGCCACCAGAACGGGAGGAGCAGTGCGACGCTCCACGTCGGCGGACT
CGAGAATTCCGCGACCCAAGCACCTCTCCAGTCCGAGTCCGGTGCGCAAA
GAGTTCATGCGGCAGAACACCTACACGCTGGCCACGCCTTCGCCAACTCC
AAGTCCACAGGTGGAAAGGAAGGCGCGATTGAGCTCCCTGCAAGAGAAGC
CACCGTCAGTGTCCAGTTTCCAGGCATCGGAGCCATTGCCCGAATCCCAA
AGCTTCATCCGTCAACCGCAGAAGGATTCATTGGATCTGAGTCTCTTGGG
CGAGGATGAGTTGATAGTCCGAGAGGAGAAGCGGGTGAGCATCAGCTGGT
CGCGCGATGCCTCACCAGCTCCGCTGATGACCTCCTCGGGCACTACCAAG
TCCGAATCACCGGAACAGGAGCCGGCAATGAGCTCCTCAAGTGATTCAAG
TCCGCCCATCGACGTCCAGATTGCCCAGGGAGCGCGCAAGAAGTCCAGCA
CTCCACTCAAATCTAGTCAGAGCGAGGGCTCCCAAGTGACCGTGATCGAA
CAGCCGGCCACCAAAGCCCAGCTCCACCAGTTGGCCCAGGCGGATTCGGA
GCCCCGAAAAAAAACCGAGTTGTCCCAGAGCCTTAAAGACGCCCTCAAGA
TCATTAACGACTCGCTGCTGAAGAAGCTGGGCGCCAAACCCATATCCTCG
CAGAGTCTCAAGTCGGCCAAGGCGACCATTCAGGATCATTGGTTCACTAA
CTCCAGTACTGGCAAATCCGATCCCCATCAGGTTGAGGATTATCTAGATT
ACTTTGAATCGCTGTCCATCCCATTGCTGGAGTACTGTGTCAACCTGTCC
GACAGTAATGGCAACACAGCCATGCACTATGCAGTCTCGCACGGCAACTT
CGATGTGGTATCCATACTGCTGGATTCTAAGGTTTGCGATGTAAACCAAA
TGAATAACGCCGGATACACATCGGTGATGCTCGTATCGTTGGCCAAGCTG
AAGCAGCCCGCCCATCGGACAGTCGTCGAGCGACTGTTCAAGATGGCCGA
TGTCAACATACGGGCCAAGAAGCACTGCCAGACCGCTTTGATGCTCGCTG
TGTCGCATGGTAACGGGGACATGGTCAATATGCTTCTGGACGCCGGGGCG
GATATTAATATCCAGGACGAGGACGGCAGTACGGCTCTGATGTGCGCCGC
CGAGCACGGACGCGTGGATGTGATCAAGCATCTACTGTCGCATCCCGAGT
GCGATTCACTGGTCACCGATGTGGATGGCAGCACAGCCTTCAAGATCGCC
TGGCAGGCTGGCCACCGGGATGTGGGACTGCTCATCTATGTCCACGAGCA
GATGCTGCGAAGCAAGCTGCCAAATCGCGGAGATGCAACAAGAAGCTCCC
TGATTTCGCCACCGCGCCACAAGCGCCAGCCATCGCAGTAAAAGCTTTCT
AGACCAT
BS05239.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:17:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10249-RA | 3675 | CG10249-PA | 1..3675 | 17..3691 | 18375 | 100 | Plus |
| CG10249-RG | 3885 | CG10249-PG | 314..3885 | 120..3691 | 17860 | 100 | Plus |
| CG10249-RD | 4020 | CG10249-PD | 449..4020 | 120..3691 | 17860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:17:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10249-RA | 4221 | CG10249-RA | 49..3724 | 17..3692 | 18380 | 100 | Plus |
| CG10249-RG | 5340 | CG10249-RG | 1271..4843 | 120..3692 | 17865 | 100 | Plus |
| CG10249-RD | 4880 | CG10249-RD | 811..4383 | 120..3692 | 17865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:17:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14904073..14905453 | 2433..1053 | 6905 | 100 | Minus |
| 2R | 25286936 | 2R | 14910224..14910821 | 614..17 | 2990 | 100 | Minus |
| 2R | 25286936 | 2R | 14905514..14905955 | 1054..613 | 2210 | 100 | Minus |
| 2R | 25286936 | 2R | 14903136..14903566 | 2862..2432 | 2155 | 100 | Minus |
| 2R | 25286936 | 2R | 14902784..14903031 | 3110..2863 | 1240 | 100 | Minus |
| 2R | 25286936 | 2R | 14902511..14902723 | 3322..3110 | 1065 | 100 | Minus |
| 2R | 25286936 | 2R | 14902202..14902405 | 3524..3321 | 1020 | 100 | Minus |
| 2R | 25286936 | 2R | 14901972..14902141 | 3692..3523 | 850 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:17:53 has no hits.
BS05239.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-13 16:50:01 Download gff for
BS05239.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10249-RA | 49..3721 | 17..3689 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:15:54 Download gff for
BS05239.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10249-RA | 49..3721 | 17..3689 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:05 Download gff for
BS05239.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10249-RA | 49..3721 | 17..3689 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:05 Download gff for
BS05239.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14902785..14903031 | 2863..3109 | 100 | <- | Minus |
| 2R | 14901975..14902140 | 3524..3689 | 100 | <- | Minus |
| 2R | 14902203..14902403 | 3323..3523 | 100 | <- | Minus |
| 2R | 14902511..14902723 | 3110..3322 | 100 | <- | Minus |
| 2R | 14903136..14903564 | 2434..2862 | 100 | <- | Minus |
| 2R | 14904073..14905451 | 1055..2433 | 100 | <- | Minus |
| 2R | 14905514..14905953 | 615..1054 | 100 | <- | Minus |
| 2R | 14910224..14910821 | 17..614 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:15:54 Download gff for
BS05239.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10789480..10789645 | 3524..3689 | 100 | <- | Minus |
| arm_2R | 10789708..10789908 | 3323..3523 | 100 | <- | Minus |
| arm_2R | 10790016..10790228 | 3110..3322 | 100 | <- | Minus |
| arm_2R | 10790290..10790536 | 2863..3109 | 100 | <- | Minus |
| arm_2R | 10790641..10791069 | 2434..2862 | 100 | <- | Minus |
| arm_2R | 10791578..10792956 | 1055..2433 | 100 | <- | Minus |
| arm_2R | 10793019..10793458 | 615..1054 | 100 | <- | Minus |
| arm_2R | 10797729..10798326 | 17..614 | 100 | | Minus |
BS05239.pep Sequence
Translation from 16 to 3690
> BS05239.pep
MGISKLVSGHTIPFHFRNRISARKCNLYIVLLLKQTSHESEPDSPHPIGG
GGSLHMSQSYTTTPCYRPRSSSVPRFTYGSIPPRSESPFGTASSTCSSLR
GGVESDAGIYHQRHRPAISPPETRAFLHEALDEVCSDFERTLERTSVKRR
KSPYGAGSLSMDRNNNKLSLSISNGHGALKELKSHRLGNSTWDRHFDVAD
SCIGGNQSPTGTPRPFLRSNTLPLRQRPSPAEVQYESYVQATVAANAKSP
VEQLESAKSPGAPPPPPPRRHHLLATTPTGKPTFKEDRPQENGSVSSSSL
QSPVISETGQTTADAQALFQIREQMALSLRRLKDLEEQVKVIPDMELELN
SLRSEKQKLLRRNEELMRSQRQTPSPPSPGLKTASPVQFTPQRISPVSLE
SLGARMRSSSTSASPSPSVVRRDVSTQAVVRPPATRDVSVGHQPTTRNVG
VQPSETVYSKEELDKKVEQALTNAQKQQLRKLISVGTQMYVPQRDQKDSG
VQTTPERPKLKYHVGVTVKPATRENFTSCKPDVRHVGSSDDRLDDVLCEK
CAVSKRSVACGPETPAEKVKPAPQMPGRSNTFSLGENETVSVVRKTIGCQ
TPVTLVLSSGSQTTTAVVRSTGAQVNPQQQHSGVQCATEQVSRQTDTKGL
QRLTRSQTKAEQVSESVPRPTTRHTASNTDKVEEAEPAKVRTSHSACNTE
EVRKRDVGCGDIVKPHISIACAANYCDSCKEAIQDLARGFSKASPTATRT
GGAVRRSTSADSRIPRPKHLSSPSPVRKEFMRQNTYTLATPSPTPSPQVE
RKARLSSLQEKPPSVSSFQASEPLPESQSFIRQPQKDSLDLSLLGEDELI
VREEKRVSISWSRDASPAPLMTSSGTTKSESPEQEPAMSSSSDSSPPIDV
QIAQGARKKSSTPLKSSQSEGSQVTVIEQPATKAQLHQLAQADSEPRKKT
ELSQSLKDALKIINDSLLKKLGAKPISSQSLKSAKATIQDHWFTNSSTGK
SDPHQVEDYLDYFESLSIPLLEYCVNLSDSNGNTAMHYAVSHGNFDVVSI
LLDSKVCDVNQMNNAGYTSVMLVSLAKLKQPAHRTVVERLFKMADVNIRA
KKHCQTALMLAVSHGNGDMVNMLLDAGADINIQDEDGSTALMCAAEHGRV
DVIKHLLSHPECDSLVTDVDGSTAFKIAWQAGHRDVGLLIYVHEQMLRSK
LPNRGDATRSSLISPPRHKRQPSQ*
BS05239.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:33:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10249-PA | 1224 | CG10249-PA | 1..1224 | 1..1224 | 6272 | 100 | Plus |
| CG10249-PG | 1294 | CG10249-PG | 103..1294 | 33..1224 | 6098 | 99.8 | Plus |
| CG10249-PD | 1339 | CG10249-PD | 148..1339 | 33..1224 | 6098 | 99.8 | Plus |
| CG10249-PC | 1301 | CG10249-PC | 110..1301 | 33..1224 | 6098 | 99.8 | Plus |
| CG10249-PB | 1042 | CG10249-PB | 17..1042 | 199..1224 | 5213 | 99.8 | Plus |
