Clone Sequence Records
BS05248.3prime Sequence
702 bp (701 high quality bases) assembled on 2005-12-02
> BS05248.3prime
ATGGTCTAGAAAGCTTCTACTTGCCACGGTTTTCTGCCAGCTTGGCCTTG
AAGATGCTCTTAAGCTCGTCAGCGCCGTCGCCGTTTACCTCCTGGTAGTA
GGGTAGCTCTGCCAGACGCTTCAGCCAGGCGTGCATCTTGGGAAACTTAA
ATTCATCGATGGGAGCGGTGTCGTTCACCGAGGTTACGGTGGCCACGGCG
CAAAAGTCTGCGATGGTTAGATCAGAACCACACAAATACGGCTGATCCTT
GAGGAATCCCTCTAGGATCTCCCAGCACTTCTGGATGTATGCGATCTTGT
CGATGGAGCAGTCCGTCGATCCATAATACAGGATGGGCTCGTAAAGGAAG
CGCAGGCGCGCGAAGAGGTGGCCGGAGTCCAGATGGAGCCGAGCATCCAC
GTTGGCGCGCTGCACCAATTCCTTCGGATAGAGCTGCTGCTCCTTCTGGC
CATACTTCTCCACCAGGTAGGCGCAGATGGCGTGCGAGTCAATGATAGTG
GCCTCGCCGTCGATCAGGGTCGGGATGGTGTGCTGGGGGTTCAGCTTGAG
GAATTCCGGAGTCAGATGCTCTCCCTTCAGCAGGTTAATTGGCCGTAGTT
CAAGGTCGAGTCCGATCGCCTTAGCCGTGAGGAGGACGGCGCGCGATGGG
GGACTTAGGGTGGCATAATACAGAGCTGGCTTTGACATGTCGACTGATAA
CT
BS05248.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:00:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16936-PA | 672 | CG16936-RA | 1..672 | 688..17 | 3360 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:12:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 1311 | CG16936-RC | 542..1214 | 689..17 | 3365 | 100 | Minus |
GstE12-RB | 1022 | CG16936-RB | 227..899 | 689..17 | 3365 | 100 | Minus |
GstE12-RD | 907 | CG16936-RD | 138..810 | 689..17 | 3365 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 13:12:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24766841..24767418 | 17..594 | 2890 | 100 | Plus |
2R | 25286936 | 2R | 24767474..24767570 | 593..689 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-06 13:12:17 has no hits.
BS05248.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:05:47 Download gff for
BS05248.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-PA | 1..672 | 17..688 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:32:32 Download gff for
BS05248.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-PA | 1..672 | 17..688 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:50:25 Download gff for
BS05248.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 133..812 | 13..693 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:57:39 Download gff for
BS05248.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 133..812 | 13..693 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:57:39 Download gff for
BS05248.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24766839..24767417 | 13..593 | 99 | <- | Plus |
2R | 24767475..24767575 | 594..693 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:50:25 Download gff for
BS05248.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20654362..20654940 | 13..593 | 99 | <- | Plus |
arm_2R | 20654998..20655098 | 594..693 | 98 | | Plus |
BS05248.5prime Sequence
702 bp (701 high quality bases) assembled on 2005-12-02
> BS05248.5prime
GAAGTTATCAGTCGACATGTCAAAGCCAGCTCTGTATTATGCCACCCTAA
GTCCCCCATCGCGCGCCGTCCTCCTCACGGCTAAGGCGATCGGACTCGAC
CTTGAACTACGGCCAATTAACCTGCTGAAGGGAGAGCATCTGACTCCGGA
ATTCCTCAAGCTGAACCCCCAGCACACCATCCCGACCCTGATCGACGGCG
AGGCCACTATCATTGACTCGCACGCCATCTGCGCCTACCTGGTGGAGAAG
TATGGCCAGAAGGAGCAGCAGCTCTATCCGAAGGAATTGGTGCAGCGCGC
CAACGTGGATGCTCGGCTCCATCTGGACTCCGGCCACCTCTTCGCGCGCC
TGCGCTTCCTTTACGAGCCCATCCTGTATTATGGATCGACGGACTGCTCC
ATCGACAAGATCGCATACATCCAGAAGTGCTGGGAGATCCTAGAGGGATT
CCTCAAGGATCAGCCGTATTTGTGTGGTTCTGATCTAACCATCGCAGACT
TTTGCGCCGTGGCCACCGTAACCTCGGTGAACGACACCGCTCCCATCGAT
GAATTTAAGTTTCCCAAGATGCACGCCTGGCTGAAGCGTCTGGCAGAGCT
ACCCTACTACCAGGAGGTAAACGGCGACGGCGCTGACGAGCTTAAGAGCA
TCTTCAAGGCCAAGCTGGCAGAAAACCGTGGCAAGTAGAAGCTTTCTAGA
CC
BS05248.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:00:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16936-PA | 672 | CG16936-RA | 1..672 | 17..688 | 3360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:08:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 1311 | CG16936-RC | 542..1214 | 16..688 | 3365 | 100 | Plus |
GstE12-RB | 1022 | CG16936-RB | 227..899 | 16..688 | 3365 | 100 | Plus |
GstE12-RD | 907 | CG16936-RD | 138..810 | 16..688 | 3365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:08:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24766841..24767418 | 688..111 | 2890 | 100 | Minus |
2R | 25286936 | 2R | 24767474..24767570 | 112..16 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:08:24 has no hits.
BS05248.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:05:48 Download gff for
BS05248.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-PA | 1..672 | 17..688 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:32:33 Download gff for
BS05248.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-PA | 1..672 | 17..688 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:15:19 Download gff for
BS05248.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 133..812 | 12..692 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:19:26 Download gff for
BS05248.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 133..812 | 12..692 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:19:26 Download gff for
BS05248.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24766839..24767417 | 112..692 | 99 | <- | Minus |
2R | 24767475..24767575 | 12..111 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:15:19 Download gff for
BS05248.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20654362..20654940 | 112..692 | 99 | <- | Minus |
arm_2R | 20654998..20655098 | 12..111 | 98 | | Minus |
BS05248.complete Sequence
704 bp (704 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ635084
> BS05248.complete
GAAGTTATCAGTCGACATGTCAAAGCCAGCTCTGTATTATGCCACCCTAA
GTCCCCCATCGCGCGCCGTCCTCCTCACGGCTAAGGCGATCGGACTCGAC
CTTGAACTACGGCCAATTAACCTGCTGAAGGGAGAGCATCTGACTCCGGA
ATTCCTCAAGCTGAACCCCCAGCACACCATCCCGACCCTGATCGACGGCG
AGGCCACTATCATTGACTCGCACGCCATCTGCGCCTACCTGGTGGAGAAG
TATGGCCAGAAGGAGCAGCAGCTCTATCCGAAGGAATTGGTGCAGCGCGC
CAACGTGGATGCTCGGCTCCATCTGGACTCCGGCCACCTCTTCGCGCGCC
TGCGCTTCCTTTACGAGCCCATCCTGTATTATGGATCGACGGACTGCTCC
ATCGACAAGATCGCATACATCCAGAAGTGCTGGGAGATCCTAGAGGGATT
CCTCAAGGATCAGCCGTATTTGTGTGGTTCTGATCTAACCATCGCAGACT
TTTGCGCCGTGGCCACCGTAACCTCGGTGAACGACACCGCTCCCATCGAT
GAATTTAAGTTTCCCAAGATGCACGCCTGGCTGAAGCGTCTGGCAGAGCT
ACCCTACTACCAGGAGGTAAACGGCGACGGCGCTGACGAGCTTAAGAGCA
TCTTCAAGGCCAAGCTGGCAGAAAACCGTGGCAAGTAGAAGCTTTCTAGA
CCAT
BS05248.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:54:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 672 | CG16936-PC | 1..672 | 17..688 | 3360 | 100 | Plus |
GstE12-RB | 672 | CG16936-PB | 1..672 | 17..688 | 3360 | 100 | Plus |
GstE12-RD | 672 | CG16936-PD | 1..672 | 17..688 | 3360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:54:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 1311 | CG16936-RC | 542..1214 | 16..688 | 3365 | 100 | Plus |
GstE12-RB | 1022 | CG16936-RB | 227..899 | 16..688 | 3365 | 100 | Plus |
GstE12-RD | 907 | CG16936-RD | 138..810 | 16..688 | 3365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:54:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24766841..24767418 | 688..111 | 2890 | 100 | Minus |
2R | 25286936 | 2R | 24767474..24767570 | 112..16 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:54:28 has no hits.
BS05248.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:55:59 Download gff for
BS05248.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-RA | 1..672 | 17..688 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:55:46 Download gff for
BS05248.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-RA | 54..737 | 7..692 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:40 Download gff for
BS05248.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 139..810 | 17..688 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:55:59 Download gff for
BS05248.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-RA | 54..737 | 7..692 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:34:03 Download gff for
BS05248.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 139..810 | 17..688 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:34:03 Download gff for
BS05248.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24766841..24767417 | 112..688 | 100 | <- | Minus |
2R | 24767475..24767569 | 17..111 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:40 Download gff for
BS05248.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20654364..20654940 | 112..688 | 100 | <- | Minus |
arm_2R | 20654998..20655092 | 17..111 | 100 | | Minus |
BS05248.pep Sequence
Translation from 16 to 687
> BS05248.pep
MSKPALYYATLSPPSRAVLLTAKAIGLDLELRPINLLKGEHLTPEFLKLN
PQHTIPTLIDGEATIIDSHAICAYLVEKYGQKEQQLYPKELVQRANVDAR
LHLDSGHLFARLRFLYEPILYYGSTDCSIDKIAYIQKCWEILEGFLKDQP
YLCGSDLTIADFCAVATVTSVNDTAPIDEFKFPKMHAWLKRLAELPYYQE
VNGDGADELKSIFKAKLAENRGK*
BS05248.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:46:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-PC | 223 | CG16936-PC | 1..223 | 1..223 | 1169 | 100 | Plus |
GstE12-PB | 223 | CG16936-PB | 1..223 | 1..223 | 1169 | 100 | Plus |
GstE12-PD | 223 | CG16936-PD | 1..223 | 1..223 | 1169 | 100 | Plus |
GstE12-PA | 223 | CG16936-PA | 1..223 | 1..223 | 1169 | 100 | Plus |
GstE11-PB | 225 | CG5224-PB | 3..225 | 2..223 | 566 | 49.3 | Plus |