Clone Sequence Records
BS05251.complete Sequence
2807 bp assembled on 2009-12-07
GenBank Submission: KX798360
> BS05251.complete
GAAGTTATCAGTCGACATGCGATTCGCTCTGGCCACCGTGGCCATCATCT
GGGCTTTATTCGTCCTGGCCGACGGAGTGGACCCCGGGAACTTTAAGACC
TGCGAGCAGAGCAGTTTTTGTCGACGCTCCCGAAAGATTCAGGGATCGGG
CAGCAAGTACGCCTTAATTCCCGGCACCTTGAACACCTATGCGGATTCGT
TGACCGCTGATCTCGTTAACAAGGAAAACCATCACCAGTTTGCCTTTAAG
CTAGAGGCTCTGGTGGGCAGTACCTTCCGCCTGCAGATCGATGAAAAGCA
GCCACTTCGGCCACGATATCGCGTCGAGCACGCTCTGAAGGGCCCAACCC
AGGCCGGACGCATTCGTGTCCAGCGGGAAACAGATGGAGAGATCGTTATC
ACATCGGAGAAGAACAAGGCTGTGATCCACGGAGACCCGTTCCGCATCGA
TTTCTTCGAGAACGACGTGCTGGTGGTCTCGGTGAATGCCAAGAACTGGT
TGTACTTTGAGCATCTGCGGCAGAAGGCCCAGGAACCGACCTCCCACCCG
GCGGAAAACGAGAATCAGCAGGAGCAGGATGCCGCTGTCGAAACTCCTAA
AGCAGCAGATACTATCGATGATCCTGGTGCATGGGAGGAGAACTTCAAAT
CACACCACGACTCTAAGCCCTACGGTCCGGAAGCTGTGGCTCTGGACTTT
TCGTTCCCCGCAGCCAAAGTTCTATTCGGTATTCCAGAGCACGCCGACAG
CTTCATACTAAAGTCCACCTCGGGTACGGATCCTTACCGCCTGTACAACC
TGGATGTGTTCGAATACGTTGTGGACAGCAAGATGGCCCTGTACGGCTCA
GTGCCGGTAATCTATGGTCATGGAGCGCAACGCACAGCGGGCGTTTACTG
GCAGAATGCCGCTGAAACTTGGGTGGACATTCAAACGTCGGAGACCAATG
TTGTATCTTCGCTGGTAAATTTTGTATCCGGCTCGCAGAAGACTCCTCCT
CCGGCTGCCCACTTTATGTCGGAGTCGGGCATCGTGGACGCCTTCATCAT
GTTGGGACCCAAGCCCATGGACACTTTTAAGCAGTACGCGGCTCTGACTG
GAACACACGAGTTACCTCAGTTATTTGCTCTGGCCTACCACCAGAGCCGC
TGGAACTACAACGACGAGAGGGACGTGACCTCCGTGTCAGCGAAATTCGA
CGAGTACAATATACCCATGGACACCATGTGGCTGGACATCGAGCATACAG
ATGGCAAGCGCTACTTCACCTGGGACAAGTTCAAGTTCCCGCACCCGCTG
GCAATGATCAAGAATCTTACAGAACTGGGTCGCCACTTGGTGGTGATAGT
CGACCCGCACATCAAGCGGGATAATAATTACTTCTTCCACCGCGACTGCA
CGGATCGTGGTTATTATGTGAAAACGCGCGAGGGCAATGATTACGAGGGC
TGGTGTTGGCCGGGAGCGGCTAGTTATCCTGATTTCTTTAACCCCGTGGT
CAGAGAGTACTACGCCAGCCAGTACGCGCTGGACAAGTTCCAAACGGTCA
CCGCAGATGTGATGTTGTGGAACGACATGAACGAGCCATCGGTGTTCAAC
GGCCCTGAGATCACGGCGCCCAAGGACTTGATCCACTACGGCAACTGGGA
GCACCGTGACGTGCACAATTTGTACGGTCACATGCACTTGATGGGGTCCT
TCGCGGGCCTGCAGCAGCGCGATCCCAACCAGCGGCCCTTCATCCTCACA
CGCGCCCACTTTGCTGGTTCCCAGCGTTATGCTGCCATTTGGACGGGTGA
CAACTTTGCGGACTGGTCGCATCTACAGCACTCAGTCAAAATGTGTCTCA
CGGAGGCGGTGGCCGGCTTCTCCTTCTGCGGTGCCGATGTCGGTGCCTTC
TTTGGAAACCCAGATACTGAGCTGCTGGAGCGCTGGTATCAAACCGGTGC
CTTCCTGCCCTTTTTCCGGGCTCATGCACACATCGACACTAAGCGCCGGG
AGCCATGGCTTTTCCCAGAACGCACTCGCCAGGTTATCCAAAATGCTGTG
ATCAAGCGTTATTCATATCTGCCCCTGTGGTACACCGCATTCTACGAGCT
GGAGCTGACTGGCGAGCCGGTAATTCGCCCATTATTAGCCCAATATCCAC
TGGATAAGGAGGCCTTCGGCGTTGACAACCAGCTGTTGGTGCAAGATCGC
CTGCTTGTGAGACCCGTCATGCAGCAGGGCGTCAGCAAGGTGGACGTGTA
CTTCCCGGCAATTGACGACAAAAAGAATGGCGACTGGTGGTACGATGTGG
ATACTTACCAGCGCCAGGAACGATCCGGCTATGTGTCGGTTCCAGTAGAT
GATTTCAAGATCCCCGTTTGGCAGCGTGGTGGCAGCATTGTACCGAAGAA
GGAGCGACAGCGCCGCGCCTCAACCTTGATGTTGCACGATCCGTACACAC
TGATAATCTGCTTAGACCGTCAGGGCAAGGCATCCGGTTCCCTCTACCTA
GACGACGAGAAGTCCTACGCTTACCGCCAGGGCCAGCGCATCCACGTGAA
CTACGAGTTCGCCCACGACCAGCTGGTCAATAGCTTCGTGGGCAAGCCCA
AGTACAAGACCCTTGCCTGGATCGAGCGAATCGTGATCGCCGGACTTGAG
AAGGTGCCCAGCAGCGCCAGCATCACGGTGAATGGTGTCAGCCAGCAGCT
GGAGGTGCTCCATCATGATAACACCGTCGTCGTGCGCAAGCCGGGCGTCA
AGATGGACGTCGACTTCGCCATTAAACTCAACTTTGCGTAGAAGCTTTCT
AGACCAT
BS05251.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:17:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14476-RC | 2775 | CG14476-PC | 1..2775 | 17..2791 | 13875 | 100 | Plus |
CG14476-RE | 2775 | CG14476-PE | 1..2775 | 17..2791 | 13875 | 100 | Plus |
CG14476-RD | 2775 | CG14476-PD | 1..2775 | 17..2791 | 13875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:17:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14476-RC | 3252 | CG14476-RC | 136..2911 | 16..2791 | 13880 | 100 | Plus |
CG14476-RE | 3264 | CG14476-RE | 246..3021 | 16..2791 | 13880 | 100 | Plus |
CG14476-RD | 3129 | CG14476-RD | 111..2886 | 16..2791 | 13880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:17:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21601344..21602830 | 2359..873 | 7435 | 100 | Minus |
X | 23542271 | X | 21602981..21603731 | 873..123 | 3755 | 100 | Minus |
X | 23542271 | X | 21600843..21601276 | 2791..2358 | 2170 | 100 | Minus |
X | 23542271 | X | 21604463..21604570 | 123..16 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:17:57 has no hits.
BS05251.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:48:00 Download gff for
BS05251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14476-RD | 121..2895 | 17..2791 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:10:55 Download gff for
BS05251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14476-RD | 121..2895 | 17..2791 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:05:41 Download gff for
BS05251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14476-RD | 121..2895 | 17..2791 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:08:25 Download gff for
BS05251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14476-RD | 112..2886 | 17..2791 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:08:25 Download gff for
BS05251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21600843..21601274 | 2360..2791 | 100 | <- | Minus |
X | 21601344..21602829 | 874..2359 | 100 | <- | Minus |
X | 21602981..21603730 | 124..873 | 100 | <- | Minus |
X | 21604463..21604569 | 17..123 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:10:55 Download gff for
BS05251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21471870..21472301 | 2360..2791 | 100 | <- | Minus |
arm_X | 21472371..21473856 | 874..2359 | 100 | <- | Minus |
arm_X | 21474008..21474757 | 124..873 | 100 | <- | Minus |
arm_X | 21475490..21475596 | 17..123 | 100 | | Minus |
BS05251.3prime Sequence
900 bp (845 high quality bases) assembled on 2005-12-02
> BS05251.3prime
ATGGTCTAGAAAGCTTCTACGCAAAGTTGAGTTTAATGGCGAAGTCGACG
TCCATCTTGACGCCCGGCTTGCGCACGACGACGGTGTTATCATGATGGAG
CACCTCCAGCTGCTGGCTGACACCATTCACCGTGATGCTGGCGCTGCTGG
GCACCTTCTCAAGTCCGGCGATCACGATTCGCTCGATCCAGGCAAGGGTC
TTGTACTTGGGCTTGCCCACGAAGCTATTGACCAGCTGGTCGTGGGCGAA
CTCGTAGTTCACGTGGATGCGCTGGCCCTGGCGGTAAGCGTAGGACTTCT
CGTCGTCTAGGTAGAGGGAACCGGATGCCTTGCCCTGACGGTCTAAGCAG
ATTATCAGTGTGTACGGATCGTGCAACATCAAGGTTGAGGCGCGGCGCTG
TCGCTCCTTCTTCGGTACAATGCTGCCACCACGCTGCCAAACGGGGATCT
TGAAATCATCTACTGGAACCGACACATAGCCGGATCGTTCCTGGCGCTGG
TAAGTATCCACATCGTACCACCAGTCGCCATTCTTTTTGTCGTCAATTGC
CGGGAAGTACACGTCCACCTTGCTGACGCCCTGCTGCATGACGGGTCTCA
CAAGCAGGCGATCTTGCACCAACAGCTGGTTGTCAACGCCGAAGGCCTCC
TTATCCAGTGGATATTGGGCTAATAATGGGCGAATTACCGGCTCGCCAGT
CAGCTCCAGCTCGTAGAATGCGGTGTACCACAGGGGCAGATATGAATAAC
GCTTGATCACAGCATTTTGGATAACCTGGCGAGTGCGTTCTGGGAAAAGC
CATGGCTCCCGGCGCTTAGTGTCGATGTGTGCATGAGCCCGGAAAAAGGG
CAGGAAGGCACCGGTTTGATACCAGCGCTCCAGCAGCTCAGTATCTGGGT
BS05251.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:00:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14476-PB | 2775 | CG14476-RB | 1892..2775 | 900..17 | 4420 | 100 | Minus |
CG14476-PA | 2775 | CG14476-RA | 1892..2775 | 900..17 | 4420 | 100 | Minus |
CG14476-PD | 2775 | CG14476-RD | 1892..2775 | 900..17 | 4420 | 100 | Minus |
CG14476-PE | 2775 | CG14476-RE | 1892..2775 | 900..17 | 4420 | 100 | Minus |
CG14476-PC | 2775 | CG14476-RC | 1892..2775 | 900..17 | 4420 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:57:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14476-RC | 3252 | CG14476-RC | 2028..2911 | 900..17 | 4420 | 100 | Minus |
CG14476-RE | 3264 | CG14476-RE | 2138..3021 | 900..17 | 4420 | 100 | Minus |
CG14476-RD | 3129 | CG14476-RD | 2003..2886 | 900..17 | 4420 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:57:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21601344..21601795 | 449..900 | 2260 | 100 | Plus |
X | 23542271 | X | 21600843..21601276 | 17..450 | 2170 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 18:57:17 has no hits.
BS05251.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:05:53 Download gff for
BS05251.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14476-PB | 1892..2775 | 17..900 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:32:41 Download gff for
BS05251.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14476-PC | 1892..2775 | 17..900 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:13:07 Download gff for
BS05251.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14476-RD | 2012..2898 | 12..900 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:55:58 Download gff for
BS05251.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14476-RD | 2003..2889 | 12..900 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 20:55:58 Download gff for
BS05251.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21600840..21601274 | 12..448 | 99 | <- | Plus |
X | 21601344..21601795 | 449..900 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:13:07 Download gff for
BS05251.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21471867..21472301 | 12..448 | 99 | <- | Plus |
arm_X | 21472371..21472822 | 449..900 | 100 | | Plus |
BS05251.5prime Sequence
907 bp (757 high quality bases) assembled on 2005-12-02
> BS05251.5prime
GAAGTTATCAGTCGACATGCGATTCGCTCTGGCCACCGTGGCCATCATCT
GGGCTTTATTCGTCCTGGCCGACGGAGTGGACCCCGGGAACTTTAAGACC
TGCGAGCAGAGCAGTTTTTGTCGACGCTCCCGAAAGATTCAGGGATCGGG
CAGCAAGTACGCCTTAATTCCCGGCACCTTGAACACCTATGCGGATTCGT
TGACCGCTGATCTCGTTAACAAGGAAAACCATCACCAGTTTGCCTTTAAG
CTAGAGGCTCTGGTGGGCAGTACCTTCCGCCTGCAGATCGATGAAAAGCA
GCCACTTCGGCCACGATATCGCGTCGAGCACGCTCTGAAGGGCCCAACCC
AGGCCGGACGCATTCGTGTCCAGCGGGAAACAGATGGAGAGATCGTTATC
ACATCGGAGAAGAACAAGGCTGTGATCCACGGAGACCCGTTCCGCATCGA
TTTCTTCGAGAACGACGTGCTGGTGGTCTCGGTGAATGCCAAGAACTGGT
TGTACTTTGAGCATCTGCGGCAGAAGGCCCAGGAACCGACCTCCCACCCG
GCGGAAAACGAGAATCAGCAGGAGCAGGATGCCGCTGTCGAAACTCCTAA
AGCAGCAGATACTATCGATGATCCTGGTGCATGGGAGGAGAACTTCAAAT
CACACCACGACTCTAAGCCCTACGGTCCGGAAGCTGTGGCTCTGGACTTT
TCGTTCCCCGCAGCCAAAGTTCTATTCGGTATTCCAGAGCACGCCGACAG
CTTCATACTAAAGTCCACCTCGGGTACGGATCCTTACCGCCTGTACAACC
TGGATGTGTTCGAATACGTTGTGGACAGCAAGATGGCCCTGTACGGCTCA
GTGCCGGTAATCTATGGTCATGGAGCGCAACGCACAGCGGGCGTTTACTG
GCAGAAT
BS05251.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:00:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14476-PB | 2775 | CG14476-RB | 1..891 | 17..907 | 4455 | 100 | Plus |
CG14476-PA | 2775 | CG14476-RA | 1..891 | 17..907 | 4455 | 100 | Plus |
CG14476-PD | 2775 | CG14476-RD | 1..891 | 17..907 | 4455 | 100 | Plus |
CG14476-PE | 2775 | CG14476-RE | 1..891 | 17..907 | 4455 | 100 | Plus |
CG14476-PC | 2775 | CG14476-RC | 1..891 | 17..907 | 4455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:51:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14476-RC | 3252 | CG14476-RC | 136..1027 | 16..907 | 4460 | 100 | Plus |
CG14476-RE | 3264 | CG14476-RE | 246..1137 | 16..907 | 4460 | 100 | Plus |
CG14476-RD | 3129 | CG14476-RD | 111..1002 | 16..907 | 4460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:50:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21602981..21603731 | 873..123 | 3755 | 100 | Minus |
X | 23542271 | X | 21604463..21604570 | 123..16 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:50:57 has no hits.
BS05251.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:05:54 Download gff for
BS05251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14476-PB | 1..891 | 17..907 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:32:42 Download gff for
BS05251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14476-PC | 1..891 | 17..907 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:42:30 Download gff for
BS05251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14476-RD | 114..1011 | 10..907 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:16:51 Download gff for
BS05251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14476-RD | 105..1002 | 10..907 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:16:51 Download gff for
BS05251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21602796..21602829 | 874..907 | 100 | <- | Minus |
X | 21602981..21603730 | 124..873 | 100 | <- | Minus |
X | 21604463..21604576 | 10..123 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:42:30 Download gff for
BS05251.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21473823..21473856 | 874..907 | 100 | <- | Minus |
arm_X | 21474008..21474757 | 124..873 | 100 | <- | Minus |
arm_X | 21475490..21475603 | 10..123 | 98 | | Minus |
BS05251.pep Sequence
Translation from 16 to 2790
> BS05251.pep
MRFALATVAIIWALFVLADGVDPGNFKTCEQSSFCRRSRKIQGSGSKYAL
IPGTLNTYADSLTADLVNKENHHQFAFKLEALVGSTFRLQIDEKQPLRPR
YRVEHALKGPTQAGRIRVQRETDGEIVITSEKNKAVIHGDPFRIDFFEND
VLVVSVNAKNWLYFEHLRQKAQEPTSHPAENENQQEQDAAVETPKAADTI
DDPGAWEENFKSHHDSKPYGPEAVALDFSFPAAKVLFGIPEHADSFILKS
TSGTDPYRLYNLDVFEYVVDSKMALYGSVPVIYGHGAQRTAGVYWQNAAE
TWVDIQTSETNVVSSLVNFVSGSQKTPPPAAHFMSESGIVDAFIMLGPKP
MDTFKQYAALTGTHELPQLFALAYHQSRWNYNDERDVTSVSAKFDEYNIP
MDTMWLDIEHTDGKRYFTWDKFKFPHPLAMIKNLTELGRHLVVIVDPHIK
RDNNYFFHRDCTDRGYYVKTREGNDYEGWCWPGAASYPDFFNPVVREYYA
SQYALDKFQTVTADVMLWNDMNEPSVFNGPEITAPKDLIHYGNWEHRDVH
NLYGHMHLMGSFAGLQQRDPNQRPFILTRAHFAGSQRYAAIWTGDNFADW
SHLQHSVKMCLTEAVAGFSFCGADVGAFFGNPDTELLERWYQTGAFLPFF
RAHAHIDTKRREPWLFPERTRQVIQNAVIKRYSYLPLWYTAFYELELTGE
PVIRPLLAQYPLDKEAFGVDNQLLVQDRLLVRPVMQQGVSKVDVYFPAID
DKKNGDWWYDVDTYQRQERSGYVSVPVDDFKIPVWQRGGSIVPKKERQRR
ASTLMLHDPYTLIICLDRQGKASGSLYLDDEKSYAYRQGQRIHVNYEFAH
DQLVNSFVGKPKYKTLAWIERIVIAGLEKVPSSASITVNGVSQQLEVLHH
DNTVVVRKPGVKMDVDFAIKLNFA*
BS05251.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:52:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14476-PC | 924 | CG14476-PC | 1..924 | 1..924 | 4967 | 100 | Plus |
CG14476-PE | 924 | CG14476-PE | 1..924 | 1..924 | 4967 | 100 | Plus |
CG14476-PD | 924 | CG14476-PD | 1..924 | 1..924 | 4967 | 100 | Plus |
CG14476-PA | 924 | CG14476-PA | 1..924 | 1..924 | 4967 | 100 | Plus |
CG14476-PB | 924 | CG14476-PB | 1..924 | 1..924 | 4967 | 100 | Plus |