Clone BS05254 Report

Search the DGRC for BS05254

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:52
Well:54
Vector:pDNR-Dual
Associated Gene/TranscriptFkbp14-RA
Protein status:BS05254.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05254.3prime Sequence

681 bp (680 high quality bases) assembled on 2005-12-02

> BS05254.3prime
ATGGTCTAGAAAGCTTCTACAGCTCGTCGTGTTTGGGTCCCGAGAACTCA
TCGTGCGAGATGAAACCGTTCTTATCCTTATCCTCGTGCTGAAAGATCTC
CTCCACCAGCTTGTCGTTCTCAGCCAGCATGTTCTTCAGCTCCTCGGAAT
CCTGTCCCTCCACGGCGGTCATCTGCTTCTTTAGATACTCGCTGACCTCT
TCGCGACTCAGCTGCTTGTCGGCATTATCGTCGATCTCCTTGAACACATT
GGTGGTGGGCGGGGCATTGCCGATGTTGATCAGCTCCACATCGAAGAGGA
GGGTGGCCTTGGGCGGTATCACGTTGCCGGCACCCTGGTCACCATAGCCC
AGCTGGGGAGGAATGGTCAGCTTGCGCTTCTCACCCACGCACATGTTGAG
CAGACCCTGATCCCAACCCTTAATCACCTGGCCGGCGCCCAATTGGAATG
TGAAGGGCTGGTCGCGGTCGAAGCTCGAGTCGAATTTCTTGCCATCGGCC
TGCAGAGTTCCAGTGTAGTGCATGGTGAGGGAATCGCCGTTCTTGGACTT
TTGTTCGCACACCTCCGGCGTGCTGATCACCTCCACTTTCAGATCCTGAG
CCCGGACCAGGCTGTTGCTGATGGCCACCAGCAGAAGGCACGAGATAACG
AGATTGGATTTCGACATGTCGACTGATAACT

BS05254.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:00:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG9847-PB 696 Fkbp13-RB 45..696 668..17 3260 100 Minus
CG9847-PA 651 Fkbp13-RA 1..651 667..17 3255 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:25:22
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp14-RF 1350 CG9847-RF 200..851 668..17 3260 100 Minus
Fkbp14-RE 1294 CG9847-RE 144..795 668..17 3260 100 Minus
Fkbp14-RC 1301 CG9847-RC 151..802 668..17 3260 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 17:25:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21495131..21495325 474..668 975 100 Plus
2R 25286936 2R 21488017..21488207 195..385 955 100 Plus
2R 25286936 2R 21487666..21487847 17..198 910 100 Plus
2R 25286936 2R 21488271..21488363 383..475 465 100 Plus
Blast to na_te.dros performed on 2015-01-31 17:25:19 has no hits.

BS05254.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:05:57 Download gff for BS05254.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9847-PB 40..696 17..676 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:32:46 Download gff for BS05254.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9847-PB 40..696 17..676 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:33:57 Download gff for BS05254.3prime
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 146..806 12..676 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:50:01 Download gff for BS05254.3prime
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 146..806 12..676 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:50:01 Download gff for BS05254.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21487662..21487845 12..196 98 <- Plus
2R 21488019..21488206 197..384 100 <- Plus
2R 21488273..21488361 385..473 100 <- Plus
2R 21495131..21495332 474..679 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:33:57 Download gff for BS05254.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17375167..17375350 12..196 98 <- Plus
arm_2R 17375524..17375711 197..384 100 <- Plus
arm_2R 17375778..17375866 385..473 100 <- Plus
arm_2R 17382636..17382837 474..679 97   Plus

BS05254.5prime Sequence

681 bp (680 high quality bases) assembled on 2005-12-02

> BS05254.5prime
GAAGTTATCAGTCGACATGTCGAAATCCAATCTCGTTATCTCGTGCCTTC
TGCTGGTGGCCATCAGCAACAGCCTGGTCCGGGCTCAGGATCTGAAAGTG
GAGGTGATCAGCACGCCGGAGGTGTGCGAACAAAAGTCCAAGAACGGCGA
TTCCCTCACCATGCACTACACTGGAACTCTGCAGGCCGATGGCAAGAAAT
TCGACTCGAGCTTCGACCGCGACCAGCCCTTCACATTCCAATTGGGCGCC
GGCCAGGTGATTAAGGGTTGGGATCAGGGTCTGCTCAACATGTGCGTGGG
TGAGAAGCGCAAGCTGACCATTCCTCCCCAGCTGGGCTATGGTGACCAGG
GTGCCGGCAACGTGATACCGCCCAAGGCCACCCTCCTCTTCGATGTGGAG
CTGATCAACATCGGCAATGCCCCGCCCACCACCAATGTGTTCAAGGAGAT
CGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTCAGCGAGTATC
TAAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTCCGAGGAGCTGAAG
AACATGCTGGCTGAGAACGACAAGCTGGTGGAGGAGATCTTTCAGCACGA
GGATAAGGATAAGAACGGTTTCATCTCGCACGATGAGTTCTCGGGACCCA
AACACGACGAGCTGTAGAAGCTTTCTAGACC

BS05254.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:00:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG9847-PB 696 Fkbp13-RB 45..696 16..667 3260 100 Plus
CG9847-PA 651 Fkbp13-RA 1..651 17..667 3255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp14-RF 1350 CG9847-RF 200..851 16..667 3260 100 Plus
Fkbp14-RE 1294 CG9847-RE 144..795 16..667 3260 100 Plus
Fkbp14-RC 1301 CG9847-RC 151..802 16..667 3260 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:06:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21495131..21495325 210..16 975 100 Minus
2R 25286936 2R 21488017..21488207 489..299 955 100 Minus
2R 25286936 2R 21487666..21487847 667..486 910 100 Minus
2R 25286936 2R 21488271..21488363 301..209 465 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:06:45 has no hits.

BS05254.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:05:58 Download gff for BS05254.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9847-PB 40..696 8..667 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:32:48 Download gff for BS05254.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9847-PB 40..696 8..667 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:12:35 Download gff for BS05254.5prime
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 146..806 8..672 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:33:30 Download gff for BS05254.5prime
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 146..806 8..672 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:33:30 Download gff for BS05254.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21487662..21487845 488..672 98 <- Minus
2R 21488019..21488206 300..487 100 <- Minus
2R 21488273..21488361 211..299 100 <- Minus
2R 21495131..21495332 5..210 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:12:35 Download gff for BS05254.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17375167..17375350 488..672 98 <- Minus
arm_2R 17375524..17375711 300..487 100 <- Minus
arm_2R 17375778..17375866 211..299 100 <- Minus
arm_2R 17382636..17382837 5..210 97   Minus

BS05254.complete Sequence

683 bp (683 high quality bases) assembled on 2006-02-02

GenBank Submission: FJ635086

> BS05254.complete
GAAGTTATCAGTCGACATGTCGAAATCCAATCTCGTTATCTCGTGCCTTC
TGCTGGTGGCCATCAGCAACAGCCTGGTCCGGGCTCAGGATCTGAAAGTG
GAGGTGATCAGCACGCCGGAGGTGTGCGAACAAAAGTCCAAGAACGGCGA
TTCCCTCACCATGCACTACACTGGAACTCTGCAGGCCGATGGCAAGAAAT
TCGACTCGAGCTTCGACCGCGACCAGCCCTTCACATTCCAATTGGGCGCC
GGCCAGGTGATTAAGGGTTGGGATCAGGGTCTGCTCAACATGTGCGTGGG
TGAGAAGCGCAAGCTGACCATTCCTCCCCAGCTGGGCTATGGTGACCAGG
GTGCCGGCAACGTGATACCGCCCAAGGCCACCCTCCTCTTCGATGTGGAG
CTGATCAACATCGGCAATGCCCCGCCCACCACCAATGTGTTCAAGGAGAT
CGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTCAGCGAGTATC
TAAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTCCGAGGAGCTGAAG
AACATGCTGGCTGAGAACGACAAGCTGGTGGAGGAGATCTTTCAGCACGA
GGATAAGGATAAGAACGGTTTCATCTCGCACGATGAGTTCTCGGGACCCA
AACACGACGAGCTGTAGAAGCTTTCTAGACCAT

BS05254.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp14-RF 651 CG9847-PF 1..651 17..667 3255 100 Plus
Fkbp14-RE 651 CG9847-PE 1..651 17..667 3255 100 Plus
Fkbp14-RC 651 CG9847-PC 1..651 17..667 3255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp14-RF 1350 CG9847-RF 200..851 16..667 3260 100 Plus
Fkbp14-RE 1294 CG9847-RE 144..795 16..667 3260 100 Plus
Fkbp14-RC 1301 CG9847-RC 151..802 16..667 3260 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21495131..21495325 210..16 975 100 Minus
2R 25286936 2R 21488017..21488207 489..299 955 100 Minus
2R 25286936 2R 21487666..21487847 667..486 910 100 Minus
2R 25286936 2R 21488271..21488363 301..209 465 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:41:38 has no hits.

BS05254.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:48:13 Download gff for BS05254.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp13-RB 40..696 8..667 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:36:13 Download gff for BS05254.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp13-RC 143..803 8..672 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:01 Download gff for BS05254.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 152..802 17..667 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:48:13 Download gff for BS05254.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp13-RA 144..802 10..672 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:28 Download gff for BS05254.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 152..802 17..667 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:28 Download gff for BS05254.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21487666..21487845 488..667 100 <- Minus
2R 21488019..21488206 300..487 100 <- Minus
2R 21488273..21488361 211..299 100 <- Minus
2R 21495131..21495324 17..210 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:01 Download gff for BS05254.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17375171..17375350 488..667 100 <- Minus
arm_2R 17375524..17375711 300..487 100 <- Minus
arm_2R 17375778..17375866 211..299 100 <- Minus
arm_2R 17382636..17382829 17..210 100   Minus

BS05254.pep Sequence

Translation from 16 to 666

> BS05254.pep
MSKSNLVISCLLLVAISNSLVRAQDLKVEVISTPEVCEQKSKNGDSLTMH
YTGTLQADGKKFDSSFDRDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKL
TIPPQLGYGDQGAGNVIPPKATLLFDVELINIGNAPPTTNVFKEIDDNAD
KQLSREEVSEYLKKQMTAVEGQDSEELKNMLAENDKLVEEIFQHEDKDKN
GFISHDEFSGPKHDEL*

BS05254.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:27:14
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp14-PF 216 CG9847-PF 1..216 1..216 1117 100 Plus
Fkbp14-PE 216 CG9847-PE 1..216 1..216 1117 100 Plus
Fkbp14-PC 216 CG9847-PC 1..216 1..216 1117 100 Plus
Fkbp14-PA 216 CG9847-PA 1..216 1..216 1117 100 Plus
Fkbp14-PD 220 CG9847-PD 1..220 1..216 1102 98.2 Plus