Clone Sequence Records
BS05254.3prime Sequence
681 bp (680 high quality bases) assembled on 2005-12-02
> BS05254.3prime
ATGGTCTAGAAAGCTTCTACAGCTCGTCGTGTTTGGGTCCCGAGAACTCA
TCGTGCGAGATGAAACCGTTCTTATCCTTATCCTCGTGCTGAAAGATCTC
CTCCACCAGCTTGTCGTTCTCAGCCAGCATGTTCTTCAGCTCCTCGGAAT
CCTGTCCCTCCACGGCGGTCATCTGCTTCTTTAGATACTCGCTGACCTCT
TCGCGACTCAGCTGCTTGTCGGCATTATCGTCGATCTCCTTGAACACATT
GGTGGTGGGCGGGGCATTGCCGATGTTGATCAGCTCCACATCGAAGAGGA
GGGTGGCCTTGGGCGGTATCACGTTGCCGGCACCCTGGTCACCATAGCCC
AGCTGGGGAGGAATGGTCAGCTTGCGCTTCTCACCCACGCACATGTTGAG
CAGACCCTGATCCCAACCCTTAATCACCTGGCCGGCGCCCAATTGGAATG
TGAAGGGCTGGTCGCGGTCGAAGCTCGAGTCGAATTTCTTGCCATCGGCC
TGCAGAGTTCCAGTGTAGTGCATGGTGAGGGAATCGCCGTTCTTGGACTT
TTGTTCGCACACCTCCGGCGTGCTGATCACCTCCACTTTCAGATCCTGAG
CCCGGACCAGGCTGTTGCTGATGGCCACCAGCAGAAGGCACGAGATAACG
AGATTGGATTTCGACATGTCGACTGATAACT
BS05254.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:00:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9847-PB | 696 | Fkbp13-RB | 45..696 | 668..17 | 3260 | 100 | Minus |
CG9847-PA | 651 | Fkbp13-RA | 1..651 | 667..17 | 3255 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:25:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fkbp14-RF | 1350 | CG9847-RF | 200..851 | 668..17 | 3260 | 100 | Minus |
Fkbp14-RE | 1294 | CG9847-RE | 144..795 | 668..17 | 3260 | 100 | Minus |
Fkbp14-RC | 1301 | CG9847-RC | 151..802 | 668..17 | 3260 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 17:25:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21495131..21495325 | 474..668 | 975 | 100 | Plus |
2R | 25286936 | 2R | 21488017..21488207 | 195..385 | 955 | 100 | Plus |
2R | 25286936 | 2R | 21487666..21487847 | 17..198 | 910 | 100 | Plus |
2R | 25286936 | 2R | 21488271..21488363 | 383..475 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 17:25:19 has no hits.
BS05254.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:05:57 Download gff for
BS05254.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9847-PB | 40..696 | 17..676 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:32:46 Download gff for
BS05254.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9847-PB | 40..696 | 17..676 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:33:57 Download gff for
BS05254.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 146..806 | 12..676 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:50:01 Download gff for
BS05254.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 146..806 | 12..676 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:50:01 Download gff for
BS05254.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21487662..21487845 | 12..196 | 98 | <- | Plus |
2R | 21488019..21488206 | 197..384 | 100 | <- | Plus |
2R | 21488273..21488361 | 385..473 | 100 | <- | Plus |
2R | 21495131..21495332 | 474..679 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:33:57 Download gff for
BS05254.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17375167..17375350 | 12..196 | 98 | <- | Plus |
arm_2R | 17375524..17375711 | 197..384 | 100 | <- | Plus |
arm_2R | 17375778..17375866 | 385..473 | 100 | <- | Plus |
arm_2R | 17382636..17382837 | 474..679 | 97 | | Plus |
BS05254.5prime Sequence
681 bp (680 high quality bases) assembled on 2005-12-02
> BS05254.5prime
GAAGTTATCAGTCGACATGTCGAAATCCAATCTCGTTATCTCGTGCCTTC
TGCTGGTGGCCATCAGCAACAGCCTGGTCCGGGCTCAGGATCTGAAAGTG
GAGGTGATCAGCACGCCGGAGGTGTGCGAACAAAAGTCCAAGAACGGCGA
TTCCCTCACCATGCACTACACTGGAACTCTGCAGGCCGATGGCAAGAAAT
TCGACTCGAGCTTCGACCGCGACCAGCCCTTCACATTCCAATTGGGCGCC
GGCCAGGTGATTAAGGGTTGGGATCAGGGTCTGCTCAACATGTGCGTGGG
TGAGAAGCGCAAGCTGACCATTCCTCCCCAGCTGGGCTATGGTGACCAGG
GTGCCGGCAACGTGATACCGCCCAAGGCCACCCTCCTCTTCGATGTGGAG
CTGATCAACATCGGCAATGCCCCGCCCACCACCAATGTGTTCAAGGAGAT
CGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTCAGCGAGTATC
TAAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTCCGAGGAGCTGAAG
AACATGCTGGCTGAGAACGACAAGCTGGTGGAGGAGATCTTTCAGCACGA
GGATAAGGATAAGAACGGTTTCATCTCGCACGATGAGTTCTCGGGACCCA
AACACGACGAGCTGTAGAAGCTTTCTAGACC
BS05254.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:00:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9847-PB | 696 | Fkbp13-RB | 45..696 | 16..667 | 3260 | 100 | Plus |
CG9847-PA | 651 | Fkbp13-RA | 1..651 | 17..667 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:06:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fkbp14-RF | 1350 | CG9847-RF | 200..851 | 16..667 | 3260 | 100 | Plus |
Fkbp14-RE | 1294 | CG9847-RE | 144..795 | 16..667 | 3260 | 100 | Plus |
Fkbp14-RC | 1301 | CG9847-RC | 151..802 | 16..667 | 3260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:06:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21495131..21495325 | 210..16 | 975 | 100 | Minus |
2R | 25286936 | 2R | 21488017..21488207 | 489..299 | 955 | 100 | Minus |
2R | 25286936 | 2R | 21487666..21487847 | 667..486 | 910 | 100 | Minus |
2R | 25286936 | 2R | 21488271..21488363 | 301..209 | 465 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:06:45 has no hits.
BS05254.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:05:58 Download gff for
BS05254.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9847-PB | 40..696 | 8..667 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:32:48 Download gff for
BS05254.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9847-PB | 40..696 | 8..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:12:35 Download gff for
BS05254.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 146..806 | 8..672 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:33:30 Download gff for
BS05254.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 146..806 | 8..672 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:33:30 Download gff for
BS05254.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21487662..21487845 | 488..672 | 98 | <- | Minus |
2R | 21488019..21488206 | 300..487 | 100 | <- | Minus |
2R | 21488273..21488361 | 211..299 | 100 | <- | Minus |
2R | 21495131..21495332 | 5..210 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:12:35 Download gff for
BS05254.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17375167..17375350 | 488..672 | 98 | <- | Minus |
arm_2R | 17375524..17375711 | 300..487 | 100 | <- | Minus |
arm_2R | 17375778..17375866 | 211..299 | 100 | <- | Minus |
arm_2R | 17382636..17382837 | 5..210 | 97 | | Minus |
BS05254.complete Sequence
683 bp (683 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ635086
> BS05254.complete
GAAGTTATCAGTCGACATGTCGAAATCCAATCTCGTTATCTCGTGCCTTC
TGCTGGTGGCCATCAGCAACAGCCTGGTCCGGGCTCAGGATCTGAAAGTG
GAGGTGATCAGCACGCCGGAGGTGTGCGAACAAAAGTCCAAGAACGGCGA
TTCCCTCACCATGCACTACACTGGAACTCTGCAGGCCGATGGCAAGAAAT
TCGACTCGAGCTTCGACCGCGACCAGCCCTTCACATTCCAATTGGGCGCC
GGCCAGGTGATTAAGGGTTGGGATCAGGGTCTGCTCAACATGTGCGTGGG
TGAGAAGCGCAAGCTGACCATTCCTCCCCAGCTGGGCTATGGTGACCAGG
GTGCCGGCAACGTGATACCGCCCAAGGCCACCCTCCTCTTCGATGTGGAG
CTGATCAACATCGGCAATGCCCCGCCCACCACCAATGTGTTCAAGGAGAT
CGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTCAGCGAGTATC
TAAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTCCGAGGAGCTGAAG
AACATGCTGGCTGAGAACGACAAGCTGGTGGAGGAGATCTTTCAGCACGA
GGATAAGGATAAGAACGGTTTCATCTCGCACGATGAGTTCTCGGGACCCA
AACACGACGAGCTGTAGAAGCTTTCTAGACCAT
BS05254.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:41:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fkbp14-RF | 651 | CG9847-PF | 1..651 | 17..667 | 3255 | 100 | Plus |
Fkbp14-RE | 651 | CG9847-PE | 1..651 | 17..667 | 3255 | 100 | Plus |
Fkbp14-RC | 651 | CG9847-PC | 1..651 | 17..667 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:41:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fkbp14-RF | 1350 | CG9847-RF | 200..851 | 16..667 | 3260 | 100 | Plus |
Fkbp14-RE | 1294 | CG9847-RE | 144..795 | 16..667 | 3260 | 100 | Plus |
Fkbp14-RC | 1301 | CG9847-RC | 151..802 | 16..667 | 3260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:41:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21495131..21495325 | 210..16 | 975 | 100 | Minus |
2R | 25286936 | 2R | 21488017..21488207 | 489..299 | 955 | 100 | Minus |
2R | 25286936 | 2R | 21487666..21487847 | 667..486 | 910 | 100 | Minus |
2R | 25286936 | 2R | 21488271..21488363 | 301..209 | 465 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:41:38 has no hits.
BS05254.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:48:13 Download gff for
BS05254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp13-RB | 40..696 | 8..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:36:13 Download gff for
BS05254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp13-RC | 143..803 | 8..672 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:01 Download gff for
BS05254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 152..802 | 17..667 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:48:13 Download gff for
BS05254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp13-RA | 144..802 | 10..672 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:28 Download gff for
BS05254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 152..802 | 17..667 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:28 Download gff for
BS05254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21487666..21487845 | 488..667 | 100 | <- | Minus |
2R | 21488019..21488206 | 300..487 | 100 | <- | Minus |
2R | 21488273..21488361 | 211..299 | 100 | <- | Minus |
2R | 21495131..21495324 | 17..210 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:01 Download gff for
BS05254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17375171..17375350 | 488..667 | 100 | <- | Minus |
arm_2R | 17375524..17375711 | 300..487 | 100 | <- | Minus |
arm_2R | 17375778..17375866 | 211..299 | 100 | <- | Minus |
arm_2R | 17382636..17382829 | 17..210 | 100 | | Minus |
BS05254.pep Sequence
Translation from 16 to 666
> BS05254.pep
MSKSNLVISCLLLVAISNSLVRAQDLKVEVISTPEVCEQKSKNGDSLTMH
YTGTLQADGKKFDSSFDRDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKL
TIPPQLGYGDQGAGNVIPPKATLLFDVELINIGNAPPTTNVFKEIDDNAD
KQLSREEVSEYLKKQMTAVEGQDSEELKNMLAENDKLVEEIFQHEDKDKN
GFISHDEFSGPKHDEL*
BS05254.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:27:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fkbp14-PF | 216 | CG9847-PF | 1..216 | 1..216 | 1117 | 100 | Plus |
Fkbp14-PE | 216 | CG9847-PE | 1..216 | 1..216 | 1117 | 100 | Plus |
Fkbp14-PC | 216 | CG9847-PC | 1..216 | 1..216 | 1117 | 100 | Plus |
Fkbp14-PA | 216 | CG9847-PA | 1..216 | 1..216 | 1117 | 100 | Plus |
Fkbp14-PD | 220 | CG9847-PD | 1..220 | 1..216 | 1102 | 98.2 | Plus |