Clone Sequence Records
BS05256.complete Sequence
2276 bp assembled on 2009-12-07
GenBank Submission: KX795919
> BS05256.complete
GAAGTTATCAGTCGACATGTGCAGCCTGACGCCAAACCACATGGTAAACG
TAACGCAGCAGCACCTACACGATCTATTGGAAACTTTCGAAAAAAAGTCC
TTCGAGGCGGCGGCCTTTGAGGAAGGGACGGCGGAGTACGACATCTCCAA
AAAATGCGAATACCTGTTTAAGCTCGACTACAGCCTAATTGAGCTGGATA
ATACGAACGGATTGCTCAGTCCGCGATATCCTGGCCGAATACTCATCCCG
GAATATGAGCACGGGCACATGGCCAAGACGCTGGTACCGGGAAATGGACT
CTTCGGGCAAGTTGGTGGGGGAGTGGGAGGTGGAGGCTCCTCGGGAACAA
CCGCCACTGCCACGCCTCTGAACAGCAGTGCAGGAAGCACCGGAAGTGAG
GGTGTGGGCATCCAAGCCTTTGTGACCTTTGCCAATCCCCTGCAGACGCA
ACAACAGCATCCGCTCCAGCAACAATATCCCTCGCAGCAGATGCATCCCC
TCCACGCGCAATATCCCTCCCAGCAGCCACATCCACTCCAGCAGCAGCAG
CAGCAGCCATCGCAACAGCAACCACAAAATACGATATACGAGGATCAGTA
TGATATCCAGCGAATGCGGGAATTGGTAACGATGGCCAAATATGCGAGAT
GCCGTCAAAGATTCGCCGTGCCTGTGATTATGTATCGCGGAAAGTACATA
TGCCGCTCTGCCACGCTATCCGTCATGCCAGAAACCTACGGCCGAAAAGT
GGTGGACTATGCCTACGACTGCCTGAGTGGCGGCAATTACACCGCGCCAA
ACGGAGAAGAGAACGATGCTGACTCCACGGACGAGTCGCTGATCACCCAC
ATGCACGACCAGGCGCAGTCGCAGTTCAGCTACGACGAAGTCATCAAGAG
TGACATCCAGCTGCTGCATACGCTCAATGTCTCAACCATTGTGGACCTCA
TGGTCGAAAACCGCAAAATCAAATACTTCATGGCCGTTTCCTCGTCAGAG
AAAGCGGATCCCAACAAGCACTATAAGAGCTTTAACCTTCTATCCCTGCC
GTATCCGGGCTGTGAGTTCTTCAAAAAGTTCCGGGACAATAATTACATGG
CTCGCAACCTGCACTACAACTGGAAGCAAACGTTCAACGATGCGAATATC
AACATTCCCAACATGGGACCCGCTGCGGATATCGATGTGGCGTGGTCGGA
GTACCGGGATTGGGATCTGGTGGCAATCACCCAAAACTATTTGAGAGCTA
CACTGAAATACGTGCAAGAGGAAAACTCCGGCCTGCTGATTCACTGCATC
AGCGGTTGGGATCGCACGCCACTGTTTGTCTCCTTGGTCAGGCTGTCTCT
GTGGGCAGATGGACTCATCCATCAGTCGCTGAACGCCATGCAAATGGCCT
ATTTCACACTGGCCTACGACTGGTACCTGTTTGGCCATCAACTTCCCGAT
CGCCTGAAACGAGGCGAAGACATCATGTTCTTCTGCTTCCACGTGCTGAA
GTTTATCACGGACGAGGAGTTCAGCATTGTGGAGCACCGCAAGCGCACCA
AGACATCCAGCAGCAGCGGCAGTAGTGTAATAGTAATCAAATCCGATTGC
TGCGACGATGAACCGCTCAAGGAAGACTACATCCTTTCGTTCGATCAAGA
TAGCAACGACAGCTACTCAAACTGTTCCAACTGTGATATGTCCATAACAG
ATAACTTCTATGCCACGACGCCGGCGCAAGTCAATCCGTTGACCAGCAGG
TCGCCAAATCCGAAGAGATCTAGAACCAGCCCCATTTCAGTGCCCGGATC
AAATGCGCGGCAAAGACAGGAGTCTACATCGTCCAATGGTAGCTGGCAGG
TGGTTACCGACACGGGTTCAATTGACTCCATGATGAACGGCAGCTACATG
ATGCGCTTTGTGGCGCAACAGGCAGCCGATGGTGGCGGCTCCTCAAACAT
TCCTTTATGCAATGGCGGCAATGGTTACCACTGCAGCATCAATGCAGCAT
CGAGTGGCAGTGGGAGCGGAAGTGGTAGCAGTATCAGTAACGGCAGCTCG
ACGCACGGTTTCGCAAACGGTTCCTCCAAAGACGTAGGCGGCAGCACTAT
GGCCAGCAAGCAATGCATCAACTTACGAAAGCAACGCCTGAATGCAGTGC
GCGCCATTTTTATACAAGCCTACGGCAAGACGATTGGACTGAAATTCAAG
GAGGGCTCATCCATGAACCTGGCCACGTTCATTGGGAACCTGGCGGACCA
ACTGTTTTGAAAGCTTTCTAGACCAT
BS05256.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:23:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| EDTP-RA | 2244 | CG6542-PA | 1..2244 | 17..2260 | 11220 | 100 | Plus |
| EDTP-RC | 2265 | CG6542-PC | 1..2265 | 17..2260 | 10975 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:23:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| EDTP-RA | 3130 | CG6542-RA | 487..2730 | 17..2260 | 11220 | 100 | Plus |
| EDTP-RC | 3151 | CG6542-RC | 487..2751 | 17..2260 | 10975 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:23:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17434125..17434976 | 984..133 | 4260 | 100 | Minus |
| 2R | 25286936 | 2R | 17433420..17434058 | 1623..985 | 3195 | 100 | Minus |
| 2R | 25286936 | 2R | 17432774..17433132 | 2124..1766 | 1795 | 100 | Minus |
| 2R | 25286936 | 2R | 17433191..17433334 | 1767..1624 | 720 | 100 | Minus |
| 2R | 25286936 | 2R | 17432573..17432708 | 2260..2125 | 680 | 100 | Minus |
| 2R | 25286936 | 2R | 17444335..17444452 | 134..17 | 590 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 10:23:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6903 | 443..624 | 225 | 59.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2299..2449 | 429..579 | 224 | 60.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2400..2543 | 443..589 | 206 | 61.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6921 | 440..579 | 205 | 60.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6865 | 466..610 | 203 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2477 | 443..580 | 191 | 63.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6882 | 440..576 | 189 | 60.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6832..6946 | 442..559 | 186 | 64.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2395 | 489..579 | 165 | 67 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6777 | 518..576 | 160 | 74.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6676..6798 | 463..576 | 151 | 64.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1516..1585 | 441..510 | 143 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2823..2962 | 443..576 | 138 | 57.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1054..1163 | 426..542 | 136 | 61.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6693..6756 | 514..576 | 128 | 68.8 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 6059..6114 | 439..494 | 127 | 69.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2347 | 539..579 | 115 | 75.6 | Plus |
BS05256.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:25 Download gff for
BS05256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EDTP-RA | 487..2729 | 17..2259 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:18:03 Download gff for
BS05256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EDTP-RA | 487..2729 | 17..2259 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:14:41 Download gff for
BS05256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EDTP-RA | 487..2729 | 17..2259 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:20:22 Download gff for
BS05256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EDTP-RA | 487..2729 | 17..2259 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:20:22 Download gff for
BS05256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17432774..17433130 | 1768..2124 | 100 | <- | Minus |
| 2R | 17433191..17433334 | 1624..1767 | 100 | <- | Minus |
| 2R | 17432574..17432708 | 2125..2259 | 100 | <- | Minus |
| 2R | 17433420..17434058 | 985..1623 | 100 | <- | Minus |
| 2R | 17434125..17434975 | 134..984 | 100 | <- | Minus |
| 2R | 17444336..17444452 | 17..133 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:18:03 Download gff for
BS05256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13320079..13320213 | 2125..2259 | 100 | <- | Minus |
| arm_2R | 13320279..13320635 | 1768..2124 | 100 | <- | Minus |
| arm_2R | 13320696..13320839 | 1624..1767 | 100 | <- | Minus |
| arm_2R | 13320925..13321563 | 985..1623 | 100 | <- | Minus |
| arm_2R | 13321630..13322480 | 134..984 | 100 | <- | Minus |
| arm_2R | 13331841..13331957 | 17..133 | 100 | | Minus |
BS05256.3prime Sequence
960 bp (753 high quality bases) assembled on 2005-12-02
> BS05256.3prime
ATGGTCTAGAAAGCTTTCAAAACAGTTGGTCCGCCAGGTTCCCAATGAAC
GTGGCCAGGTTCATGGATGAGCCCTCCTTGAATTTCAGTCCAATCGTCTT
GCCGTAGGCTTGTATAAAAATGGCGCGCACTGCATTCAGGCGTTGCTTTC
GTAAGTTGATGCATTGCTTGCTGGCCATAGTGCTGCCGCCTACGTCTTTG
GAGGAACCGTTTGCGAAACCGTGCGTCGAGCTGCCGTTACTGATACTGCT
ACCACTTCCGCTCCCACTGCCACTCGATGCTGCATTGATGCTGCAGTGGT
AACCATTGCCGCCATTGCATAAAGGAATGTTTGAGGAGCCGCCACCATCG
GCTGCCTGTTGCGCCACAAAGCGCATCATGTAGCTGCCGTTCATCATGGA
GTCAATTGAACCCGTGTCGGTAACCACCTGCCAGCTACCATTGGACGATG
TAGACTCCTGTCTTTGCCGCGCATTTGATCCGGGCACTGAAATGGGGCTG
GTTCTAGATCTCTTCGGATTTGGCGACCTGCTGGTCAACGGATTGACTTG
CGCCGGCGTCGTGGCATAGAAGTTATCTGTTATGGACATATCACAGTTGG
AACAGTTTGAGTAGCTGTCGTTGCTATCTTGATCGAACGAAAGGATGTAG
TCTTCCTTGAGCGGTTCATCGTCGCAGCAATCGGATTTGATTACTATTAC
ACTACTGCCGCTGCTGCTGGATGTCTTGGTGCGCTTGCGGTGCTCCACAA
TGCTGAACTCCTCGTCCGTGATAAACTTCAGCACGTGGAAGCAGAAGAAC
ATGATGTCTTCGCCTCGTTTCAGGCGATCGGGGAAGTTGATGGGCCAACA
GGTACCAGTCGTANGCCAGTGTGAAATAGGCCATTTGCATGGCGTTCAGC
GACTGATGGATGAGTCCATCTGGCCACAGAGACACCCTGACCAAGGGAGA
CAACAGGGGG
BS05256.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:01:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6542-PA | 2244 | EDTP-RA | 1429..2244 | 832..17 | 4080 | 100 | Minus |
| CG6542-PB | 2241 | EDTP-RB | 1426..2241 | 832..17 | 4080 | 100 | Minus |
| CG6542-PA | 2244 | EDTP-RA | 1316..1431 | 946..831 | 461 | 95.6 | Minus |
| CG6542-PB | 2241 | EDTP-RB | 1313..1428 | 946..831 | 461 | 95.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:04:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| EDTP-RA | 3130 | CG6542-RA | 1796..2730 | 953..17 | 4564 | 99.3 | Minus |
| EDTP-RC | 3151 | CG6542-RC | 1796..2751 | 953..17 | 4344 | 97.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:04:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17432774..17433132 | 153..511 | 1795 | 100 | Plus |
| 2R | 25286936 | 2R | 17433420..17433711 | 654..946 | 1344 | 98 | Plus |
| 2R | 25286936 | 2R | 17433191..17433334 | 510..653 | 720 | 100 | Plus |
| 2R | 25286936 | 2R | 17432573..17432708 | 17..152 | 680 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 18:04:07 has no hits.
BS05256.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:06:01 Download gff for
BS05256.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EDTP-PB | 1298..2241 | 17..960 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:32:52 Download gff for
BS05256.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6542-PB | 1298..2241 | 17..960 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:04:27 Download gff for
BS05256.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EDTP-RA | 1787..2739 | 10..960 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:52:53 Download gff for
BS05256.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EDTP-RA | 1787..2739 | 10..960 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:52:53 Download gff for
BS05256.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17432564..17432708 | 10..152 | 97 | <- | Plus |
| 2R | 17432774..17433130 | 153..509 | 100 | <- | Plus |
| 2R | 17433191..17433334 | 510..653 | 100 | <- | Plus |
| 2R | 17433420..17433724 | 654..960 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:04:27 Download gff for
BS05256.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13320069..13320213 | 10..152 | 97 | <- | Plus |
| arm_2R | 13320279..13320635 | 153..509 | 100 | <- | Plus |
| arm_2R | 13320696..13320839 | 510..653 | 100 | <- | Plus |
| arm_2R | 13320925..13321229 | 654..960 | 96 | | Plus |
BS05256.5prime Sequence
879 bp (741 high quality bases) assembled on 2005-12-02
> BS05256.5prime
GAAGTTATCCGTCGACATGTGCAGCCTGACGCCAAACCACATGGTAAACG
TAACGCAGCAGCACCTACACGATCTATTGGAAACTTTCGAAAAAAAGTCC
TTCGAGGCGGCGGCCTTTGAGGAAGGGACGGCGGAGTACGACATCTCCAA
AAAATGCGAATACCTGTTTAAGCTCGACTACAGCCTAATTGAGCTGGATA
ATACGAACGGATTGCTCAGTCCGCGATATCCTGGCCGAATACTCATCCCG
GAATATGAGCACGGGCACATGGCCAAGACGCTGGTACCGGGAAATGGACT
CTTCGGGCAAGTTGGTGGGGGAGTGGGAGGTGGAGGCTCCTCGGGAACAA
CCGCCACTGCCACGCCTCTGAACAGCAGTGCAGGAAGCACCGGAAGTGAG
GGTGTGGGCATCCAAGCCTTTGTGACCTTTGCCAATCCCCTGCAGACGCA
ACAACAGCATCCGCTCCAGCAACAATATCCCTCGCAGCAGATGCATCCCC
TCCACGCGCAATATCCCTCCCAGCAGCCACATCCACTCCAGCAGCAGCAG
CAGCAGCCATCGCAACAGCAACCACAAAATACGATATACGAGGATCAGTA
TGATATCCAGCGAATGCGGGAATTGGTAACGATGGCCAAATATGCGAGAT
GCCGTCAAAGATTCGCCGTGCCTGTGATTATGTATCGCGGAAAGTACATA
TGCCGCTCTGCCACGCTATCCGTCATGCCAGAAACCTACGGCCGAAAAGT
GGTGGACTATGCCTACGACTGCCTGAGTGGCGGCAATTACACCGCGCCAA
ACGGAGAAGAGAACGATGCTGACTCCACGGACGAGTCGCTGATCACCCAC
ATGCACGACCAGGCGCAGTCGCAGTTCAG
BS05256.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:01:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6542-PA | 2244 | EDTP-RA | 1..863 | 17..879 | 4315 | 100 | Plus |
| CG6542-PB | 2241 | EDTP-RB | 117..860 | 136..879 | 3720 | 100 | Plus |
| CG6542-PB | 2241 | EDTP-RB | 1..117 | 17..133 | 585 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:02:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| EDTP-RC | 3151 | CG6542-RC | 487..1349 | 17..879 | 4315 | 100 | Plus |
| EDTP-RA | 3130 | CG6542-RA | 487..1349 | 17..879 | 4315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:02:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17434230..17434976 | 879..133 | 3735 | 100 | Minus |
| 2R | 25286936 | 2R | 17444335..17444452 | 134..17 | 590 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 05:02:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6903 | 443..624 | 225 | 59.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2299..2449 | 429..579 | 224 | 60.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2400..2543 | 443..589 | 206 | 61.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6921 | 440..579 | 205 | 60.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6865 | 466..610 | 203 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2477 | 443..580 | 191 | 63.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6882 | 440..576 | 189 | 60.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6832..6946 | 442..559 | 186 | 64.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2395 | 489..579 | 165 | 67 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6777 | 518..576 | 160 | 74.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6676..6798 | 463..576 | 151 | 64.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1516..1585 | 441..510 | 143 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2823..2962 | 443..576 | 138 | 57.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1054..1163 | 426..542 | 136 | 61.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6693..6756 | 514..576 | 128 | 68.8 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 6059..6114 | 439..494 | 127 | 69.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2347 | 539..579 | 115 | 75.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1552..1589 | 435..472 | 109 | 76.3 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 7514..7569 | 439..494 | 109 | 66.1 | Plus |
BS05256.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:06:02 Download gff for
BS05256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EDTP-PA | 1..863 | 17..879 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:32:53 Download gff for
BS05256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6542-PA | 1..863 | 17..879 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:28:11 Download gff for
BS05256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EDTP-RA | 479..1349 | 9..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:22:56 Download gff for
BS05256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EDTP-RA | 479..1349 | 9..879 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:22:56 Download gff for
BS05256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17434230..17434975 | 134..879 | 100 | <- | Minus |
| 2R | 17444336..17444460 | 9..133 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:28:11 Download gff for
BS05256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13321735..13322480 | 134..879 | 100 | <- | Minus |
| arm_2R | 13331841..13331965 | 9..133 | 96 | | Minus |
BS05256.pep Sequence
Translation from 16 to 2259
> BS05256.pep
MCSLTPNHMVNVTQQHLHDLLETFEKKSFEAAAFEEGTAEYDISKKCEYL
FKLDYSLIELDNTNGLLSPRYPGRILIPEYEHGHMAKTLVPGNGLFGQVG
GGVGGGGSSGTTATATPLNSSAGSTGSEGVGIQAFVTFANPLQTQQQHPL
QQQYPSQQMHPLHAQYPSQQPHPLQQQQQQPSQQQPQNTIYEDQYDIQRM
RELVTMAKYARCRQRFAVPVIMYRGKYICRSATLSVMPETYGRKVVDYAY
DCLSGGNYTAPNGEENDADSTDESLITHMHDQAQSQFSYDEVIKSDIQLL
HTLNVSTIVDLMVENRKIKYFMAVSSSEKADPNKHYKSFNLLSLPYPGCE
FFKKFRDNNYMARNLHYNWKQTFNDANINIPNMGPAADIDVAWSEYRDWD
LVAITQNYLRATLKYVQEENSGLLIHCISGWDRTPLFVSLVRLSLWADGL
IHQSLNAMQMAYFTLAYDWYLFGHQLPDRLKRGEDIMFFCFHVLKFITDE
EFSIVEHRKRTKTSSSSGSSVIVIKSDCCDDEPLKEDYILSFDQDSNDSY
SNCSNCDMSITDNFYATTPAQVNPLTSRSPNPKRSRTSPISVPGSNARQR
QESTSSNGSWQVVTDTGSIDSMMNGSYMMRFVAQQAADGGGSSNIPLCNG
GNGYHCSINAASSGSGSGSGSSISNGSSTHGFANGSSKDVGGSTMASKQC
INLRKQRLNAVRAIFIQAYGKTIGLKFKEGSSMNLATFIGNLADQLF*
BS05256.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:30:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| EDTP-PA | 747 | CG6542-PA | 1..747 | 1..747 | 3952 | 100 | Plus |
| EDTP-PC | 754 | CG6542-PC | 1..754 | 1..747 | 3931 | 98.9 | Plus |
