Clone Sequence Records
BS05263.complete Sequence
3014 bp assembled on 2009-12-07
GenBank Submission: KX798175
> BS05263.complete
GAAGTTATCAGTCGACATGACAAGTATCGAGGAGAATCCGTTCGCGGCTC
TGCTGCAGGAGGGCGCCAACTCCGATGGCGTGCCGCACAAACTGGTCGAG
GAGGTGCTCCTCTTCACGCTGAACAAGGCGTCCTCTTCCGCGGTCCTGTG
CCTGGCCGACGTGGTGGTGGAGACCAGCGAGGAGATGCTAAGTGAGGACC
TGGTGGCCCACGCCCTCTTTGAGCGCCTGATGCTGGCCGAGACCAGCCAG
TATGCAGCGGGCAATGCCAGTGAAATGGCCATGGAGCGGCGAGCTATGCG
TTACCTTAAAGGTGCCTTCACGCGATGCGGACTCATTCAGGCGGAGAGGA
AAATCGATTGCTCCAAGATACTAGCGCTTATCCTAAACAATGCCAGCACC
TGCATGCGCCAGCCGGACCTCTTTGCACCGCAATCCTTCGGTGCCCAGTG
GATGGAGATGTTCGAGCAGGATGAGGATGAGCACGATACCAGCACGCAGG
AGTTTTTGATACGCGTCACCTGCAAGGTGATGGAGGAGGTGGAGCCGATT
GAGGCCCTGGGCGCCCTAAAGGCCATCTTCTACCCTGTGCTCACCGAGCT
GCAGAAGAACATCGCCAAGCTGAACCTCATTACAATGAAGAAGAACACAT
TCTGGATCCTCGGATATTTCGTGCGCGACAAGCGAGCAGCTGTTCTTGGA
GAGCTGCTAATTGACTACACCACTCCCAATCCCAGAGCTAGCGGTAGCGA
ATATATGGACACTTTGTTGGGCAGTCTACTGTGCATCTCAATCCTGCCCA
AGACCCAAACAGGCAAATACGAGTTTTTCCAGGAGCTGTCAATAAACCAA
ACTGACGAAGCTCTGTGGGCTCTATTGTCGCATCACCAGCAGTCCATTTT
CCTGCTGGTCAAGCAACTCCTCGTACTCTCACCCGAAACAAAGAAAAAGA
CGCTTCAATGGGTAGGCAATTGCCTGGATGCAAATGTGCCGCGTGGTCAC
CTATGGAGCAGCATCAATGCCAGCCTGGAGCAAACAGCTCACAGCACGTC
AAGCGATGCCTTCATGACCAACCTGACTGCAGTTCTAGTTCGTCTCTGTG
CTCCCCTATGTATGCCCTCGTTAAAGGTTCTCCTGGTGGACCCTACATAT
TGTGCAGTTCCCAACAAAGATCGGCAGGCGAAGGGCGTTAGTATGCTAAG
GGCCCACGCCGAGACTTGCCTGCTCACCAGCGAAGAGGGCGAGGAGCGTT
TGACGGCCGAAAAGTACAATTTCGTGACGGAGATCTTCTACATGACACAC
AAATGCTTCGAGCTCTCCAATATTCCGTGCATTGAGCGCTTCGTTCGGGT
GCTGCGCGAGCTGCAAAACACGCAGATGGCGTACGGAGAGATCGTGAACA
GCGATCCGAATAGCGAGGTGGCCAAAAACCTATTTCGCATGATAAGGGAC
CAGATACAGCAAGTGCTGACCATCAAGAACACGCTCGCCGAGCCCACCAA
TGACATGTACCTGTTGAAATTCTTCGAAGCTTCGGCTATTTGGCTCACTG
AGATTGCCATGCTCCCGCGTGAGATTTACGAGCAGTGCCTGGACAAGCGC
GACTTTTCCCCACAGGTTTTCCGCAACATGGAGCTGCTCTCAGACACACC
GCCCTTTGTGGCACCCTATATGCAATCGGTGCCAGAGAGCATTATCGACA
ACATCTCGGCATTTTTGAATGCGGCCCGGAAACTAAACGGCGAACAATAC
ATCAATATATATTTCTCTGCCCATGATGCCTTTTTCAAGATGATAATTCT
ATTCATGGGCAGCTCAGCGCTGGTCAAGAATCCTCACCTTCGGGCCAAAC
TGGCTGAAGCATTGGAATTTCTCTTGCCCTCACGGATTATGGGAAGCCAT
CGCAAGACTTTTGTCAGCCATGTCTTCGACAACCATCCGGATCGGTTGAA
GGTGGTGCGCAGCCTGTTGAACGTTTTCGTAAGCATTGAGATGACTGGAC
AGTCAGTGCAATTCGAACAAAAATTCAACTATCGCCGGCCCATGTACGCT
ATAATGGAGTTCCTGTGGACCAAACCCGAGCACGTTCAGTGCTTTCGTGA
CCTGGCAGTCGAAGCGGAGCAGAATATGGATGCCATTGAGCCGCCCATAT
TTCTGCGCTTCATTAATCTGCTTATCAATGATGCCATCTTTCTGTTGGAC
GAGTCGTTGTCCAATCTGGAGCAGATCAAACAGCTTCAGCAGGCGCAGGA
CAATGGTGAGTGGGAAAGCCTACCGCACACTGAGCGTGAGCAGCACATGA
CGAACCTCCAGCACCTGGGCATGCTAGCTCGATTTGACAACATTATCGGT
AGGGACACCATAAATCTCCTCAAGCTGCTCACCTCGAAAATCAAAAGCAT
TTTCTGCCACAACAGCATGGTCGATCGCATGGCAGCCATGCTGAATTATT
TTCTGCTGAATTTGGTTGGCCCAAAGAAGGAGCGCTTCAAGGTAAAGGAC
AAGAAGGAGTTCGAATTCGATCCGGCTCAGACGGTGATCGAGATCTCTCA
CATCTACATCAACCTAAGCTCCGATGAGAGCTTCTGTTTGGCCGTATCGC
AGGATGGACGTTCATACAGCGAACAGCTCTTCAGCTATGCCGAGAACATC
CTGATCCGAATCGGAGGCGGCCAACTTATAGGCGACATGTCCGAGTTTGC
TGTGAAGGTAGCGCGTATGGGTGCTCAATACAAGGAGGAGCAGGAGCTGC
TGGCTGATGCGCCGGAAGAGTACCTCGATCCGATTATCTCAACGCTTATG
ACCGACCCTGTGGTGCTGCCCAGCTCCAAGGTAACAGTGGATCGTTCCAC
CATCGCCCGTCATCTTCTGAGCGATCAGACCGATCCCTTTAACCGCGAAC
CGCTCACCATGGATAAGGTCAAGTCCAACGAGGCTCTGAAGCAGGAAATT
GAGAGCTGGATTCAGGGCAAGCGGGAGGCGGCCCGCTCGAACAGTTGAAA
GCTTTCTAGACCAT
BS05263.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:41:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11070-RA | 2982 | CG11070-PA | 1..2982 | 17..2998 | 14895 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:41:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11070-RA | 3391 | CG11070-RA | 76..3057 | 17..2998 | 14895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:40:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6659826..6661699 | 1125..2998 | 9370 | 100 | Plus |
| 2L | 23513712 | 2L | 6658592..6659321 | 17..746 | 3635 | 99.9 | Plus |
| 2L | 23513712 | 2L | 6659378..6659763 | 743..1128 | 1930 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:41:00 has no hits.
BS05263.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:34 Download gff for
BS05263.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-RA | 49..3029 | 17..2997 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:20:05 Download gff for
BS05263.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-RA | 76..3056 | 17..2997 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:03:50 Download gff for
BS05263.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-RA | 49..3029 | 17..2997 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:28:08 Download gff for
BS05263.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-RA | 76..3056 | 17..2997 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:28:08 Download gff for
BS05263.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6658592..6659318 | 17..743 | 99 | -> | Plus |
| 2L | 6659379..6659761 | 744..1126 | 100 | -> | Plus |
| 2L | 6659828..6661698 | 1127..2997 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:20:05 Download gff for
BS05263.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6658592..6659318 | 17..743 | 99 | -> | Plus |
| arm_2L | 6659379..6659761 | 744..1126 | 100 | -> | Plus |
| arm_2L | 6659828..6661698 | 1127..2997 | 100 | | Plus |
BS05263.3prime Sequence
909 bp (797 high quality bases) assembled on 2005-12-02
> BS05263.3prime
ATGGTCTAGAAAGCTTTCAACTGTTCGAGCGGGCCGCCTCCCGCTTGCCC
TGAATCCAGCTCTCAATTTCCTGCTTCAGAGCCTCGTTGGACTTGACCTT
ATCCATGGTGAGCGGTTCGCGGTTAAAGGGATCGGTCTGATCGCTCAGAA
GATGACGGGCGATGGTGGAACGATCCACTGTTACCTTGGAGCTGGGCAGC
ACCACAGGGTCGGTCATAAGCGTTGAGATAATCGGATCGAGGTACTCTTC
CGGCGCATCAGCCAGCAGCTCCTGCTCCTCCTTGTATTGAGCACCCATAC
GCGCTACCTTCACAGCAAACTCGGACATGTCGCCTATAAGTTGGCCGCCT
CCGATTCGGATCAGGATGTTCTCGGCATAGCTGAAGAGCTGTTCGCTGTA
TGAACGTCCATCCTGCGATACGGCCAAACAGAAGCTCTCATCGGAGCTTA
GGTTGATGTAGATGTGAGAGATCTCGATCACCGTCTGAGCCGGATCGAAT
TCGAACTCCTTCTTGTCCTTTACCTTGAAGCGCTCCTTCTTTGGGCCAAC
CAAATTCAGCAGAAAATAATTCAGCATGGCTGCCATGCGATCGACCATGC
TGTTGTGGCAGAAAATGCTTTTGATTTTCGAGGTGAGCAGCTTGAGGAGA
TTTATGGTGTCCCTACCGATAATGTTGTCAAATCGAGCTAGCATGCCCAG
GTGCTGGAGGTTCGTCATGTGCTGCTCACGCTCAGTGTGCGGTAGGCTTT
CCCACTCACCATTGTCCTGCGCCTGCTGAAGCTGTTTGATCTGCTCCAGA
TTGGACAACGACTCGTCCAACAGAAAGATGGCATCATTGATAAGCAGATT
AATGAACCGCAGAAATATGGGCGGCTCAATGGCATCCATATTCTGCTCCG
CTTCGACTG
BS05263.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:01:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11070-PA | 2982 | CG11070-RA | 2090..2982 | 909..17 | 4440 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:58:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11070-RA | 3391 | CG11070-RA | 2165..3057 | 909..17 | 4450 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:57:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6660807..6661699 | 909..17 | 4450 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:58:04 has no hits.
BS05263.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:06:16 Download gff for
BS05263.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-PA | 2090..2982 | 17..909 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:33:11 Download gff for
BS05263.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-PA | 2090..2982 | 17..909 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:41:45 Download gff for
BS05263.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-RA | 2165..3057 | 17..909 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:12:51 Download gff for
BS05263.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-RA | 2165..3057 | 17..909 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:12:51 Download gff for
BS05263.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6660807..6661699 | 17..909 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:41:45 Download gff for
BS05263.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6660807..6661699 | 17..909 | 99 | | Minus |
BS05263.5prime Sequence
889 bp (820 high quality bases) assembled on 2005-12-02
> BS05263.5prime
GAAGTTATCAGTCGACATGACAAGTATCGAGGAGAATCCGTTCGCGGCTC
TGCTGCAGGAGGGCGCCAACTCCGATGGCGTGCCGCACAAACTGGTCGAG
GAGGTGCTCCTCTTCACGCTGAACAAGGCGTCCTCTTCCGCGGTCCTGTG
CCTGGCCGACGTGGTGGTGGAGACCAGCGAGGAGATGCTAAGTGAGGACC
TGGTGGCCCACGCCCTCTTTGAGCGCCTGATGCTGGCCGAGACCAGCCAG
TATGCAGCGGGCAATGCCAGTGAAATGGCCATGGAGCGGCGAGCTATGCG
TTACCTTAAAGGTGCCTTCACGCGATGCGGACTCATTCAGGCGGAGAGGA
AAATCGATTGCTCCAAGATACTAGCGCTTATCCTAAACAATGCCAGCACC
TGCATGCGCCAGCCGGACCTCTTTGCACCGCAATCCTTCGGTGCCCAGTG
GATGGAGATGTTCGAGCAGGATGAGGATGAGCACGATACCAGCACGCAGG
AGTTTTTGATACGCGTCACCTGCAAGGTGATGGAGGAGGTGGAGCCGATT
GAGGCCCTGGGCGCCCTAAAGGCCATCTTCTACCCTGTGCTCACCGAGCT
GCAGAAGAACATCGCCAAGCTGAACCTCATTACAATGAAGAAGAACACAT
TCTGGATCCTCGGATATTTCGTGCGCGACAAGCGAGCAGCTGTTCTTGGA
GAGCTGCTAATTGACTACACCACTCCCAATCCCAGAGCTAGCGGTAGCGA
ATATATGGACACTTTGTTGGGCAGTCTACTGTGCATCTCAATCCTGCCCA
AGACCCAAACAGGCAAATACGAGTTTTTCCAGGAGCTGTCAATAAACCAA
ACTGACGAAGCTCTGTGGGCTCTATTGTCGCATCACCAG
BS05263.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:01:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11070-PA | 2982 | CG11070-RA | 1..873 | 17..889 | 4340 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:07:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11070-RA | 3391 | CG11070-RA | 76..948 | 17..889 | 4350 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:07:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6658592..6659321 | 17..746 | 3635 | 99.9 | Plus |
| 2L | 23513712 | 2L | 6659378..6659524 | 743..889 | 735 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:07:25 has no hits.
BS05263.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:06:17 Download gff for
BS05263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-PA | 1..873 | 17..889 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:33:12 Download gff for
BS05263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-PA | 1..873 | 17..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:07:52 Download gff for
BS05263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-RA | 74..948 | 13..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:15:37 Download gff for
BS05263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11070-RA | 74..948 | 13..889 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:15:37 Download gff for
BS05263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6658590..6659318 | 13..743 | 99 | -> | Plus |
| 2L | 6659379..6659524 | 744..889 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:07:52 Download gff for
BS05263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6658590..6659318 | 13..743 | 99 | -> | Plus |
| arm_2L | 6659379..6659524 | 744..889 | 100 | | Plus |
BS05263.pep Sequence
Translation from 16 to 2997
> BS05263.pep
MTSIEENPFAALLQEGANSDGVPHKLVEEVLLFTLNKASSSAVLCLADVV
VETSEEMLSEDLVAHALFERLMLAETSQYAAGNASEMAMERRAMRYLKGA
FTRCGLIQAERKIDCSKILALILNNASTCMRQPDLFAPQSFGAQWMEMFE
QDEDEHDTSTQEFLIRVTCKVMEEVEPIEALGALKAIFYPVLTELQKNIA
KLNLITMKKNTFWILGYFVRDKRAAVLGELLIDYTTPNPRASGSEYMDTL
LGSLLCISILPKTQTGKYEFFQELSINQTDEALWALLSHHQQSIFLLVKQ
LLVLSPETKKKTLQWVGNCLDANVPRGHLWSSINASLEQTAHSTSSDAFM
TNLTAVLVRLCAPLCMPSLKVLLVDPTYCAVPNKDRQAKGVSMLRAHAET
CLLTSEEGEERLTAEKYNFVTEIFYMTHKCFELSNIPCIERFVRVLRELQ
NTQMAYGEIVNSDPNSEVAKNLFRMIRDQIQQVLTIKNTLAEPTNDMYLL
KFFEASAIWLTEIAMLPREIYEQCLDKRDFSPQVFRNMELLSDTPPFVAP
YMQSVPESIIDNISAFLNAARKLNGEQYINIYFSAHDAFFKMIILFMGSS
ALVKNPHLRAKLAEALEFLLPSRIMGSHRKTFVSHVFDNHPDRLKVVRSL
LNVFVSIEMTGQSVQFEQKFNYRRPMYAIMEFLWTKPEHVQCFRDLAVEA
EQNMDAIEPPIFLRFINLLINDAIFLLDESLSNLEQIKQLQQAQDNGEWE
SLPHTEREQHMTNLQHLGMLARFDNIIGRDTINLLKLLTSKIKSIFCHNS
MVDRMAAMLNYFLLNLVGPKKERFKVKDKKEFEFDPAQTVIEISHIYINL
SSDESFCLAVSQDGRSYSEQLFSYAENILIRIGGGQLIGDMSEFAVKVAR
MGAQYKEEQELLADAPEEYLDPIISTLMTDPVVLPSSKVTVDRSTIARHL
LSDQTDPFNREPLTMDKVKSNEALKQEIESWIQGKREAARSNS*
BS05263.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:30:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11070-PA | 993 | CG11070-PA | 1..993 | 1..993 | 5071 | 100 | Plus |
| CG9934-PB | 1217 | CG9934-PB | 498..1211 | 240..986 | 609 | 27.3 | Plus |
| CG9934-PA | 1217 | CG9934-PA | 498..1211 | 240..986 | 609 | 27.3 | Plus |
