Clone BS05282 Report

Search the DGRC for BS05282

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:52
Well:82
Vector:pDNR-Dual
Associated Gene/Transcriptl(2)k14710-RA
Protein status:BS05282.pep: full length peptide match
Sequenced Size:2618

Clone Sequence Records

BS05282.3prime Sequence

857 bp (856 high quality bases) assembled on 2005-12-02

> BS05282.3prime
ATGGTCTAGAAAGCTTCTATTCAAACACCAAAGGTATAGAAGTAAAAGGT
AGCACCGGACATGATGGCTCTAACTGCAGCGACGTGGCGAAGCAATCGGC
TGAGGCATGGAAATCGCCCAGGATCTCCATCACCTTTCCCAGTGCGAACC
AAATTTTTGGACAGCTCGGATCCAGTTTGGCCGCATCTTTTAGCATTTTT
TCAGCCAACCTCGGCTCGCCCAGTACCAAATGCGCCTCTCCAAGCGCACG
CAAAGCCTCTGTGTGATTTGGGTTGGCGGCCACGGCGTTCAGGAAACATT
GCTTGGCGTCAAACCATTGCTCCAAATAGACATGCACCTGGCCACGCATA
AACATAATCTGATGCGAAAGCGGATAAATCTGTGAGGCTTCGTGTATGCA
GTTGAGTGCCTCGTTCGGCTGATCAATCCGCAGATAGACATCAGCCAGCA
GAAGCCATATTTCAATCTGTAGCATCCAGGGTCGTCGGGGTCCAGGACGC
TGCGTAAATGAGCTCAATGAGCTTGCTGCTTCACTCAGAGCCTGTTCAAC
GCGGGAGACTGCAGCCAATGAAGCCGCGTACACAGAATTTGAATCCTTGT
CGGACATCTGTGAGGAATGTGCCAAGTGAACACCACTCTTGGTGTCTGAG
TGCTTTTCCTCCTCTCCCGCTAGCTGGGCCTCGTAAACGTCCCGCCACAC
GGCCAGCATGTGCTGCACAGTGCCCAACGCCGTCTCCGCGTCCTCTAGAT
GCAGCTGAAGATGTGCCTTAACGTGCAGTAGCTGCAGGTTATCGGGAAAC
TCGTGTAAAGCATCCTCAACAACTCCCAAAGCTTCACGAGGTCGGCGCGA
CGATGTC

BS05282.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:01:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG8325-PA 2586 l(2)k14710-RA 1746..2586 857..17 4205 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)k14710-RA 3079 CG8325-RA 1927..2767 857..17 4205 100 Minus
l(2)k14710-RB 3049 CG8325-RB 2196..2737 558..17 2710 100 Minus
l(2)k14710-RB 3049 CG8325-RB 1927..2195 857..589 1345 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:15:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6211596..6211864 589..857 1345 100 Plus
2R 25286936 2R 6210285..6210489 148..352 1010 99.5 Plus
2R 25286936 2R 6210094..6210227 17..150 670 100 Plus
2R 25286936 2R 6210728..6210855 461..588 640 100 Plus
2R 25286936 2R 6210547..6210660 347..460 570 100 Plus
Blast to na_te.dros performed on 2015-02-10 22:15:06 has no hits.

BS05282.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:06:51 Download gff for BS05282.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8325-PA 1746..2586 17..857 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:33:55 Download gff for BS05282.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8325-PA 1746..2586 17..857 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:23:45 Download gff for BS05282.3prime
Subject Subject Range Query Range Percent Splice Strand
l(2)k14710-RA 1927..2777 9..857 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:56:48 Download gff for BS05282.3prime
Subject Subject Range Query Range Percent Splice Strand
l(2)k14710-RA 1927..2777 9..857 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:56:48 Download gff for BS05282.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 6210084..6210226 9..149 97 <- Plus
2R 6210287..6210483 150..346 100 <- Plus
2R 6210547..6210660 347..460 100 <- Plus
2R 6210728..6210855 461..588 100 <- Plus
2R 6211596..6211864 589..857 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:23:45 Download gff for BS05282.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2097589..2097731 9..149 97 <- Plus
arm_2R 2097792..2097988 150..346 100 <- Plus
arm_2R 2098052..2098165 347..460 100 <- Plus
arm_2R 2098233..2098360 461..588 100 <- Plus
arm_2R 2099101..2099369 589..857 100   Plus

BS05282.5prime Sequence

803 bp (801 high quality bases) assembled on 2005-12-02

> BS05282.5prime
GAAGTTATCAGTCGACATGGCCAACAAGAACATGCGTAACACCACAACCA
AAGTGGAGGCCCTGATTGAGAGCTGTCGCAGCGAGGGCAAGTGGCACCGG
GTCATCGAGCTAACGGATGAACTGAAGACCGGGTCCCCGCACAATGAGTG
CCTGGCCAACTTTCTGGTGGGGGAAGCTCGTCTGGAGAGTTACCTGGAGG
AAAACGCTCTCGCGTCAGACTCAAATTTTGGTCGCGCCAAGTCTGGATTG
GCGGAGGCCCGGCGTTTCCTTCACTTGGCTTTGGGTGAGAGTGGCCAGAA
GGCGGGCATCGCCCTGGACGCCTATTTGCTGCTGGCCAAGCTGTGCTTTG
CCTGCGGCGAGTATGAGCAGAGTCTAGACAATTTCGTCAAGGCAGAACTC
AACACGCTTGCCGAGAAGGAGCTGACCCTTCGCAGCCTGAAGATCCTTGC
GGAATCGTATGCCATCAAGGGATTGTGTCTGGAGCAGCAGACTACGAAGC
CGTCATCTAAGTTTAAGAAGGCCGAAAAGGACACGGAAATGATTAGCTGT
TTTGAGCGCGCATCTGATCTGGGGCTGCTCTATCTGCAGGAATACGATCT
CGTTAGTGGAAGCAGTGGCTCGTCCAACAACTCGACAGCTGGTTCTACGT
TGAATGTAAACGCCTCTACTGTGCAGCCGTCGAGCAGCAGTTTTGCAATC
AGCAGTACAATACCGGCGAGTGGTCCAAGTGGACTGGAAATGAACCGCAN
GATGGGCGCCATCCTAGAGACCGCCCTGCAACGGGCACCCATAGTGCTTA
TTA

BS05282.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:01:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG8325-PA 2586 l(2)k14710-RA 1..787 17..803 3916 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:16:06
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)k14710-RB 3049 CG8325-RB 182..968 17..803 3924 99.9 Plus
l(2)k14710-RA 3079 CG8325-RA 182..968 17..803 3924 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:16:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6213469..6213752 429..146 1420 100 Minus
2R 25286936 2R 6212897..6213159 803..541 1304 99.6 Minus
2R 25286936 2R 6213812..6213941 146..17 650 100 Minus
2R 25286936 2R 6213216..6213327 541..430 560 100 Minus
Blast to na_te.dros performed on 2015-02-12 01:16:03 has no hits.

BS05282.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:06:52 Download gff for BS05282.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8325-PA 1..786 17..802 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:33:57 Download gff for BS05282.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8325-PA 1..786 17..802 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 20:57:26 Download gff for BS05282.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)k14710-RA 173..967 10..802 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:21:24 Download gff for BS05282.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)k14710-RA 173..967 10..802 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:21:24 Download gff for BS05282.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 6212898..6213158 542..802 99 <- Minus
2R 6213216..6213327 430..541 100 <- Minus
2R 6213469..6213751 147..429 100 <- Minus
2R 6213812..6213950 10..146 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 20:57:26 Download gff for BS05282.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2100403..2100663 542..802 99 <- Minus
arm_2R 2100721..2100832 430..541 100 <- Minus
arm_2R 2100974..2101256 147..429 100 <- Minus
arm_2R 2101317..2101455 10..146 97   Minus

BS05282.complete Sequence

2618 bp assembled on 2009-08-24

GenBank Submission: KX794890

> BS05282.complete
GAAGTTATCAGTCGACATGGCCAACAAGAACATGCGTAACACCACAACCA
AAGTGGAGGCCCTGATTGAGAGCTGTCGCAGCGAGGGCAAGTGGCACCGG
GTCATCGAGCTAACGGATGAACTGAAGACCGGGTCCCCGCACAATGAGTG
CCTGGCCAACTTTCTGGTGGGGGAAGCTCGTCTGGAGAGTTACCTGGAGG
AAAACGCTCTCGCGTCAGACTCAAATTTTGGTCGCGCCAAGTCTGGATTG
GCGGAGGCCCGGCGTTTCCTTCACTTGGCTTTGGGTGAGAGTGGCCAGAA
GGCGGGCATCGCCCTGGACGCCTATTTGCTGCTGGCCAAGCTGTGCTTTG
CCTGCGGCGAGTATGAGCAGAGTCTAGACAATTTCGTCAAGGCAGAACTC
AACACGCTTGCCGAGAAGGAGCTGACCCTTCGCAGCCTGAAGATCCTTGC
GGAATCGTATGCCATCAAGGGATTGTGTCTGGAGCAGCAGACTACGAAGC
CGTCATCTAAGTTTAAGAAGGCCGAAAAGGACACGGAAATGATTAGCTGT
TTTGAGCGCGCATCTGATCTGGGGCTGCTCTATCTGCAGGAATACGATCT
CGTTAGTGGAAGCAGTGGCTCGTCCAACAACTCGACAGCTGGTTCTACGT
TGAATGTAAACGCCTCTACTGTGCAGCCGTCGAGCAGCAGTTTTGCAATC
AGCAGTACAATACCGGCGAGTGGTCCAAGTGGACTGGAAATGAACCGCAG
GATGGGCGCCATCCTAGAGACCGCCCTGCAACGGGCACCCATAGTGCTTA
TTAAGACGGAAAAGCTTCAAGAGGCCGTTGAACGGTATCGAATCATGCTA
AACGCCATCGAAACGAGGGCTACTCAATCGTTGCGCCTCACGCTGGCCCG
CCAGCTAGCTGAGGTTCTTTTGAGAGGGGTCTCGGGCACGATTTACTCGC
CTCCTTTTACCGGAAAATCTGGAGGTGGGACGCTGCGAGGAGGATCCTCC
AAGAAACTTTGGAAACCGCGTAAATACGCAGCCCGCCAGCAGTTTAACCC
TCGGAACCAGCAGGAAGAGGTAATTCTGTTGCTACTCATAGCCGAGGCAC
TGGCTGTGAGGGATACAGTTTTGTCGCAGAGTCCAGAGTTTAGACAGGCC
CGTCAGCATGCTATGGGCAACGTTACGGCCGTCTATGACCTCCTGACGTT
GGCTACTGTGCGCTGGGGGCTCGTCCAGCTATTAAATGAGTCCTTTGAGA
AGGCGCTAAAGTTTAGCTTTGGTGAACAGCATGTGTGGCGGCAGTACGGC
TTAAGTTTGATGGCAGCCGAAAAGCACTCGCACGCTTTAAGGGTCTTGCA
AGAATCAATGAAGTTGACTCCTAGTGATCCTTTGCCATGTCTGTTGGCTT
CTCGCCTTTGCTACGAGAGTCTGGAGACGGTAAAGCAAGGTCTGGACTAT
GCTCAGCAAGCGCTGAAGCGCGAAGTAAAGGGCTTGCGACCATCGCGAAG
CCAACTCTTTGTGGGCATCGGTCACCAACAGCTAGCCATCCAGTCAAATC
TTAAAAGCGAGCGAGATGCTTGTCACAAGCTGGCTTTGGACGCCCTGGAG
CGCGCTGTGCAGTTTGATGGGAACGACCACCTGGCGGAATACTACTTGTC
GTTGCAGTACGCACTTCTGGGACAGCTGGCGGAGGCATTGGTTCATATCC
GTTTCGCGCTGGCGTTGCGTATGGAACATGCGCCATGTCTACACCTGTTC
GCACTGTTGCTGACATCGTCGCGCCGACCTCGTGAAGCTTTGGGAGTTGT
TGAGGATGCTTTACACGAGTTTCCCGATAACCTGCAGCTACTGCACGTTA
AGGCACATCTTCAGCTGCATCTAGAGGACGCGGAGACGGCGTTGGGCACT
GTGCAGCACATGCTGGCCGTGTGGCGGGACGTTTACGAGGCCCAGCTAGC
GGGAGAGGAGGAAAAGCACTCAGACACCAAGAGTGGTGTTCACTTGGCAC
ATTCCTCACAGATGTCCGACAAGGATTCAAATTCTGTGTACGCGGCTTCA
TTGGCTGCAGTCTCCCGCGTTGAACAGGCTCTGAGTGAAGCAGCAAGCTC
ATTGAGCTCATTTACGCAGCGTCCTGGACCCCGACGACCCTGGATGCTAC
AGATTGAAATATGGCTTCTGCTGGCTGATGTCTATCTGCGGATTGATCAG
CCGAACGAGGCACTCAACTGCATACACGAAGCCTCACAGATTTATCCGCT
TTCGCATCAGATTATGTTTATGCGTGGCCAGGTGCATGTCTATTTGGAGC
AATGGTTTGACGCCAAGCAATGTTTCCTGAACGCCGTGGCCGCCAACCCA
AATCACACAGAGGCTTTGCGTGCGCTTGGAGAGGCGCATTTGGTACTGGG
CGAGCCGAGGTTGGCTGAAAAAATGCTAAAAGATGCGGCCAAACTGGATC
CGAGCTGTCCAAAAATTTGGTTCGCACTGGGAAAGGTGATGGAGATCCTG
GGCGATTTCCATGCCTCAGCCGATTGCTTCGCCACGTCGCTGCAGTTAGA
GCCATCATGTCCGGTGCTACCTTTTACTTCTATACCTTTGGTGTTTGAAT
AGAAGCTTTCTAGACCAT

BS05282.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:30:44
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)k14710-RA 2586 CG8325-PA 1..2586 17..2602 12930 100 Plus
l(2)k14710-RB 2556 CG8325-PB 1..2014 17..2030 10070 100 Plus
l(2)k14710-RB 2556 CG8325-PB 2015..2556 2061..2602 2710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)k14710-RA 3079 CG8325-RA 182..2767 17..2602 12930 100 Plus
l(2)k14710-RB 3049 CG8325-RB 182..2195 17..2030 10070 100 Plus
l(2)k14710-RB 3049 CG8325-RB 2196..2737 2061..2602 2710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6212218..6213159 1482..541 4710 100 Minus
2R 25286936 2R 6211596..6212145 2030..1481 2750 100 Minus
2R 25286936 2R 6213469..6213752 429..146 1420 100 Minus
2R 25286936 2R 6210285..6210489 2471..2267 1010 99.5 Minus
2R 25286936 2R 6210094..6210227 2602..2469 670 100 Minus
2R 25286936 2R 6213812..6213941 146..17 650 100 Minus
2R 25286936 2R 6210728..6210855 2158..2031 640 100 Minus
2R 25286936 2R 6210547..6210660 2272..2159 570 100 Minus
2R 25286936 2R 6213216..6213327 541..430 560 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:30:44 has no hits.

BS05282.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:02:22 Download gff for BS05282.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)k14710-RA 178..2763 17..2602 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:49:46 Download gff for BS05282.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)k14710-RA 182..2767 17..2602 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:22 Download gff for BS05282.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)k14710-RA 182..2767 17..2602 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:22 Download gff for BS05282.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6213812..6213941 17..146 100   Minus
2R 6210094..6210226 2470..2602 100 <- Minus
2R 6210287..6210483 2273..2469 100 <- Minus
2R 6210547..6210660 2159..2272 100 <- Minus
2R 6210728..6210855 2031..2158 100 <- Minus
2R 6211596..6212144 1482..2030 100 <- Minus
2R 6212219..6213158 542..1481 100 <- Minus
2R 6213216..6213327 430..541 100 <- Minus
2R 6213469..6213751 147..429 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:49:46 Download gff for BS05282.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2099724..2100663 542..1481 100 <- Minus
arm_2R 2097599..2097731 2470..2602 100 <- Minus
arm_2R 2097792..2097988 2273..2469 100 <- Minus
arm_2R 2098052..2098165 2159..2272 100 <- Minus
arm_2R 2098233..2098360 2031..2158 100 <- Minus
arm_2R 2099101..2099649 1482..2030 100 <- Minus
arm_2R 2100721..2100832 430..541 100 <- Minus
arm_2R 2100974..2101256 147..429 100 <- Minus
arm_2R 2101317..2101446 17..146 100   Minus

BS05282.pep Sequence

Translation from 16 to 2601

> BS05282.pep
MANKNMRNTTTKVEALIESCRSEGKWHRVIELTDELKTGSPHNECLANFL
VGEARLESYLEENALASDSNFGRAKSGLAEARRFLHLALGESGQKAGIAL
DAYLLLAKLCFACGEYEQSLDNFVKAELNTLAEKELTLRSLKILAESYAI
KGLCLEQQTTKPSSKFKKAEKDTEMISCFERASDLGLLYLQEYDLVSGSS
GSSNNSTAGSTLNVNASTVQPSSSSFAISSTIPASGPSGLEMNRRMGAIL
ETALQRAPIVLIKTEKLQEAVERYRIMLNAIETRATQSLRLTLARQLAEV
LLRGVSGTIYSPPFTGKSGGGTLRGGSSKKLWKPRKYAARQQFNPRNQQE
EVILLLLIAEALAVRDTVLSQSPEFRQARQHAMGNVTAVYDLLTLATVRW
GLVQLLNESFEKALKFSFGEQHVWRQYGLSLMAAEKHSHALRVLQESMKL
TPSDPLPCLLASRLCYESLETVKQGLDYAQQALKREVKGLRPSRSQLFVG
IGHQQLAIQSNLKSERDACHKLALDALERAVQFDGNDHLAEYYLSLQYAL
LGQLAEALVHIRFALALRMEHAPCLHLFALLLTSSRRPREALGVVEDALH
EFPDNLQLLHVKAHLQLHLEDAETALGTVQHMLAVWRDVYEAQLAGEEEK
HSDTKSGVHLAHSSQMSDKDSNSVYAASLAAVSRVEQALSEAASSLSSFT
QRPGPRRPWMLQIEIWLLLADVYLRIDQPNEALNCIHEASQIYPLSHQIM
FMRGQVHVYLEQWFDAKQCFLNAVAANPNHTEALRALGEAHLVLGEPRLA
EKMLKDAAKLDPSCPKIWFALGKVMEILGDFHASADCFATSLQLEPSCPV
LPFTSIPLVFE*

BS05282.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:42:44
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)k14710-PA 861 CG8325-PA 1..861 1..861 4364 100 Plus
l(2)k14710-PB 851 CG8325-PB 1..851 1..861 4297 98.7 Plus