Clone Sequence Records
BS05375.3prime Sequence
721 bp (720 high quality bases) assembled on 2005-12-02
> BS05375.3prime
ATGGTCTAGAAAGCTTCTAGACAATGGAGGCTCCCTGTTGGTTGGTTCGC
TGGTTGATCTTCACGTGCGTCTGCCGCTTCTTTTCCTCCTTGAAGGCCTC
CGTGTTGGCCTTCTTTTCGATGCGACGCTCGTTGCGATAGTCCTTCAGCA
GGCGCTTCCGCTCCTTTTTCTCTTCGTGGGTCTCGTCCTTGGGTCTAATG
GACAGAACGCTTAATGTGGAGAGCACCGATTTGGCGCACAGTGACTTCGG
CCCAGTGGCAGCGGGTGATTCATCGGCCAAATTAGCAAGCGCCTTGGCTG
TCAGTTGGCCATCGACCCCACCACGCAGGACATTCGTGGGCAGGCCTGTC
TTCGGGTCGATCTGAATGGGAGCTGGATTTGTGCTGGCACTGGAGCGACG
ACTGCGTCGCGGCTCGTCGATCACCTTCGGGTGATTGTAGATATTCGAGT
AGGTGGACAGGATAGACTCGCAGTCCCACTTCTTCTGCTTAGGGTCGTCG
ACCTCATATTCCACCAACTCCTCTGTGGGATCTTCCTCACCCTCGACCAC
ATTTCGGTACTTTTCGATACGCTCGCGATCCCACTCCTTGTTATACTCGA
TGCCCTTGTCCTTTTTCTTGAACTCCTGGAAGCACTGCATCACAACGGGA
TGTTTCTGGTGCCAGTTGCCCTCGATGTCCTCGAGAGCCAAGTCGCCCAG
TTCCGGATCATCGTATGTGGC
BS05375.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:03:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7686-PA | 1482 | CG7686-RA | 778..1482 | 721..17 | 3525 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 14:19:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7686-RB | 2099 | CG7686-RB | 856..1560 | 721..17 | 3525 | 100 | Minus |
| CG7686-RA | 1660 | CG7686-RA | 856..1560 | 721..17 | 3525 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 14:19:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10837109..10837813 | 17..721 | 3525 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 14:19:19 has no hits.
BS05375.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:09:40 Download gff for
BS05375.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-PA | 778..1482 | 17..721 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:37:35 Download gff for
BS05375.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-PA | 778..1482 | 17..721 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:16:33 Download gff for
BS05375.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 856..1563 | 11..721 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:35:10 Download gff for
BS05375.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 856..1563 | 11..721 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:35:10 Download gff for
BS05375.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10837106..10837813 | 11..721 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:16:33 Download gff for
BS05375.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6724611..6725318 | 11..721 | 99 | | Plus |
BS05375.5prime Sequence
836 bp (810 high quality bases) assembled on 2005-12-02
> BS05375.5prime
GAAGTTATCAGTCGACATGGTTAAGGGCAAGAAACCGTACATTGACCGCA
AGAAGGCGGTCACCTTCCATTTGGTGCACCGCAGTCAACACGATCCCCTG
GTGACCGATGAAAATGCTCCACAGAGGGTGCTCCTCGAGGCAGCGGCGCG
CCAGCAAAAGCCGAAGGATCCAGAGCCACCCACCGATCCCGCCCAACGGC
AGGAGGAGCTGAAGAAGTTTGGTATTCACTTCGACGATGACTATGATTAC
ATGCAGCATCTGAAGAAACGTGAAAACGACGTGGTTTGGGAGTTCATGGA
GAATCCCAATCAAGCGAGAAAGCAGAAAGTCCAGGATAGTGAGAAACCGG
GCCCTGCGCCCAAGCTTATGCTGCCCAGCTCGGTGTTCGCTAGCGAGTTT
GAGGAATCCGAGGGCATGCTAAACAAGGCGGCTCCTCAAACCTTGCGTCT
CGACTGGGATCCCGATGTGGTCGCCGCCCTGGACAGCGATTGTGAGAACG
AAGAGCTGGAAGATGACTTCGTAATCCAGGCCATGGCCGAGGGCGACTCC
GACGACGAGGAATGGGATGACGAAGATGGGGAGGAGCAATCTGACATGGA
CTTCGATTCCGATGACCTAAACGAGGATGAAAATGAGGACGAACTAATGG
ACCGTTTGGCACCCCTGATGCGCGAACGTCGCTTTGACGACGAAGAGGTC
AAGTCGCGCTTCACCGAGTACTCCATGTCCTCCAGCGTAATTCGGCGCAA
TGAGCAGCTGTCCCTATTGGACGATCGCTTCGAGAAGTTTTACGCCACAT
ACGATGATCCGGAACTGGGCGACTTGGCTCTCGAGG
BS05375.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:03:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7686-PA | 1482 | CG7686-RA | 1..820 | 17..836 | 4100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:55:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7686-RB | 2099 | CG7686-RB | 79..898 | 17..836 | 4100 | 100 | Plus |
| CG7686-RA | 1660 | CG7686-RA | 79..898 | 17..836 | 4100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:55:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10837771..10838588 | 836..19 | 4090 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 08:55:41 has no hits.
BS05375.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:09:41 Download gff for
BS05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-PA | 1..820 | 17..836 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:37:37 Download gff for
BS05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-PA | 1..820 | 17..836 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:24:19 Download gff for
BS05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 74..898 | 9..836 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:39:14 Download gff for
BS05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 74..898 | 9..836 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:39:14 Download gff for
BS05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10837771..10838595 | 9..836 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:24:19 Download gff for
BS05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6725276..6726100 | 9..836 | 99 | | Minus |
BS05375.complete Sequence
1514 bp (1514 high quality bases) assembled on 2005-10-25
GenBank Submission: FJ635101
> BS05375.complete
GAAGTTATCAGTCGACATGGTTAAGGGCAAGAAACCGTACATTGACCGCA
AGAAGGCGGTCACCTTCCATTTGGTGCACCGCAGTCAACACGATCCCCTG
GTGACCGATGAAAATGCTCCACAGAGGGTGCTCCTCGAGGCAGCGGCGCG
CCAGCAAAAGCCGAAGGATCCAGAGCCACCCACCGATCCCGCCCAACGGC
AGGAGGAGCTGAAGAAGTTTGGTATTCACTTCGACGATGACTATGATTAC
ATGCAGCATCTGAAGAAACGTGAAAACGACGTGGTTTGGGAGTTCATGGA
GAATCCCAATCAAGCGAGAAAGCAGAAAGTCCAGGATAGTGAGAAACCGG
GCCCTGCGCCCAAGCTTATGCTGCCCAGCTCGGTGTTCGCTAGCGAGTTT
GAGGAATCCGAGGGCATGCTAAACAAGGCGGCTCCTCAAACCTTGCGTCT
CGACTGGGATCCCGATGTGGTCGCCGCCCTGGACAGCGATTGTGAGAACG
AAGAGCTGGAAGATGACTTCGTAATCCAGGCCATGGCCGAGGGCGACTCC
GACGACGAGGAATGGGATGACGAAGATGGGGAGGAGCAATCTGACATGGA
CTTCGATTCCGATGACCTAAACGAGGATGAAAATGAGGACGAACTAATGG
ACCGTTTGGCACCCCTGATGCGCGAACGTCGCTTTGACGACGAAGAGGTC
AAGTCGCGCTTCACCGAGTACTCCATGTCCTCCAGCGTAATTCGGCGCAA
TGAGCAGCTGTCCCTATTGGACGATCGCTTCGAGAAGTTTTACGCCACAT
ACGATGATCCGGAACTGGGCGACTTGGCTCTCGAGGACATCGAGGGCAAC
TGGCACCAGAAACATCCCGTTGTGATGCAGTGCTTCCAGGAGTTCAAGAA
AAAGGACAAGGGCATCGAGTATAACAAGGAGTGGGATCGCGAGCGTATCG
AAAAGTACCGAAATGTGGTCGAGGGTGAGGAAGATCCCACAGAGGAGTTG
GTGGAATATGAGGTCGACGACCCTAAGCAGAAGAAGTGGGACTGCGAGTC
TATCCTGTCCACCTACTCGAATATCTACAATCACCCGAAGGTGATCGACG
AGCCGCGACGCAGTCGTCGCTCCAGTGCCAGCACAAATCCAGCTCCCATT
CAGATCGACCCGAAGACAGGCCTGCCCACGAATGTCCTGCGTGGTGGGGT
CGATGGCCAACTGACAGCCAAGGCGCTTGCTAATTTGGCCGATGAATCAC
CCGCTGCCACTGGGCCGAAGTCACTGTGCGCCAAATCGGTGCTCTCCACA
TTAAGCGTTCTGTCCATTAGACCCAAGGACGAGACCCACGAAGAGAAAAA
GGAGCGGAAGCGCCTGCTGAAGGACTATCGCAACGAGCGTCGCATCGAAA
AGAAGGCCAACACGGAGGCCTTCAAGGAGGAAAAGAAGCGGCAGACGCAC
GTGAAGATCAACCAGCGAACCAACCAACAGGGAGCCTCCATTGTCTAGAA
GCTTTCTAGACCAT
BS05375.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:47:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7686-RB | 1482 | CG7686-PB | 1..1482 | 17..1498 | 7410 | 100 | Plus |
| CG7686-RA | 1482 | CG7686-PA | 1..1482 | 17..1498 | 7410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:47:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7686-RB | 2099 | CG7686-RB | 79..1560 | 17..1498 | 7410 | 100 | Plus |
| CG7686-RA | 1660 | CG7686-RA | 79..1560 | 17..1498 | 7410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:47:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10837109..10838588 | 1498..19 | 7400 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:47:29 has no hits.
BS05375.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:22:09 Download gff for
BS05375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 1..1482 | 17..1498 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:03:46 Download gff for
BS05375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 73..1562 | 9..1504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:33:06 Download gff for
BS05375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 79..1560 | 17..1498 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:22:09 Download gff for
BS05375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 73..1562 | 9..1504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:52:52 Download gff for
BS05375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 79..1560 | 17..1498 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:52:52 Download gff for
BS05375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10837109..10838589 | 17..1498 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:33:06 Download gff for
BS05375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6724614..6726094 | 17..1498 | 99 | | Minus |
BS05375.pep Sequence
Translation from 16 to 1497
> BS05375.pep
MVKGKKPYIDRKKAVTFHLVHRSQHDPLVTDENAPQRVLLEAAARQQKPK
DPEPPTDPAQRQEELKKFGIHFDDDYDYMQHLKKRENDVVWEFMENPNQA
RKQKVQDSEKPGPAPKLMLPSSVFASEFEESEGMLNKAAPQTLRLDWDPD
VVAALDSDCENEELEDDFVIQAMAEGDSDDEEWDDEDGEEQSDMDFDSDD
LNEDENEDELMDRLAPLMRERRFDDEEVKSRFTEYSMSSSVIRRNEQLSL
LDDRFEKFYATYDDPELGDLALEDIEGNWHQKHPVVMQCFQEFKKKDKGI
EYNKEWDRERIEKYRNVVEGEEDPTEELVEYEVDDPKQKKWDCESILSTY
SNIYNHPKVIDEPRRSRRSSASTNPAPIQIDPKTGLPTNVLRGGVDGQLT
AKALANLADESPAATGPKSLCAKSVLSTLSVLSIRPKDETHEEKKERKRL
LKDYRNERRIEKKANTEAFKEEKKRQTHVKINQRTNQQGASIV*
BS05375.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:33:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7686-PB | 493 | CG7686-PB | 1..493 | 1..493 | 2594 | 100 | Plus |
| CG7686-PA | 493 | CG7686-PA | 1..493 | 1..493 | 2594 | 100 | Plus |
