Clone Sequence Records
BS05412.3prime Sequence
819 bp (769 high quality bases) assembled on 2005-12-02
> BS05412.3prime
ATGGTCTAGAAAGCTTCTAGGGCCTGCATCTGTCGAGGAATCGAGGGTAC
AGGCAGACCTCGCGGATGTGGTAGCGGTTGAGCAGCCAGCAGAGGAAGCG
CTCCAGTCCCAAACCATAGCCGCCATGTGGCATGGTTCCATAGACGCGCT
GGTCCGTGTACCAGTAGTAGGGCTGTGGATCAATGCCTTCGCGCTTATAG
CCCTTGAGCAGCTCCTCGCTGTCGTAGATCCTCATCGACCCGCCCACAAT
TTCGCCCACATTTGGCAGCAGAACGTCCACGCTCTCGGTCAAACGCTGGT
CCTCCTTGCAGCGCTGCATGTAGAAGGACTTGATTTCCGCTGGGAAACGG
CACAGCATAATGGGTTCGTTGATGGTATCGGTCATCTTGCGCTCAGGAGC
CTCGGGAATATCCTCGCCAAACTCATAGAAGGTGCCATCGTCCTTGGTCA
CGTTGTTCTCCTTCAGCCACTTGATGGCATCCTCGTAGTTCATGCGACGG
AACGGCTTCTGAGGCGGTTTGAAGTCAGGGTTAAGCTCCTTGACCAAGTA
ACCCCATGGGGACTTCAGAACACGATCCACCACGTCACAGACCAGATCCT
CCAATCGATCAAGCAGATCATCGAAAGTTAGGAACGGACACTCGGCCTCC
ACGTGCGTGTATTCAGCCAAGTGACGCCGCGTACGACTCTGTTCCGCACG
ATAGCTCTGGGAAATGGTAAAGACGTCGCCCAATGCCGGCAGGCAGGTCT
CCAGATATAGCTGCGAGCTCTGGGTGAGGTAAGCCTCCTCGCCGAAGTAC
TTAAGCTTGAAGAGCGTTG
BS05412.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:04:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10687-PA | 1677 | Aats-asn-RA | 875..1677 | 819..17 | 3990 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:10:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-asn-RB | 2375 | CG10687-RB | 999..1801 | 819..17 | 4000 | 99.9 | Minus |
| Aats-asn-RA | 1982 | CG10687-RA | 999..1801 | 819..17 | 4000 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:10:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19130043..19130845 | 17..819 | 4000 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:10:33 has no hits.
BS05412.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:10:30 Download gff for
BS05412.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10687-PA | 875..1677 | 17..819 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:38:42 Download gff for
BS05412.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10687-PA | 875..1677 | 17..819 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:22:56 Download gff for
BS05412.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 999..1803 | 13..819 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:02 Download gff for
BS05412.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 999..1803 | 13..819 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:02 Download gff for
BS05412.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19130041..19130845 | 13..819 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:22:56 Download gff for
BS05412.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19130041..19130845 | 13..819 | 99 | | Plus |
BS05412.5prime Sequence
812 bp (708 high quality bases) assembled on 2005-12-02
> BS05412.5prime
GAAGTTATCAGTCGACATGCCCGCCGATCAGTTGGCTGAGTTAACCTTGG
GTGCAATCTTTACGTCGGAAAAGAAGGGTAGTGATGAGTCCGGCGATGGC
AGTGAGTCCAAGCCCTTCAAGACCATCCTGCAGGCGATGCGTCATGCGGG
CAAGGAACCCTTTCCCACGATTTACGTAGACACCAAGGATCCGAATGCAG
CGGAGCCCTACGAGCCGGCTGCCAAGTCCCAGCTGAAGAAAATTCAGAAA
CTGTTCGTCAGGGAGTCGCACAAGAATGCCGATAAGCTGCAACGGGAGGC
GGAGGATGCGGAGAAGCGCCAGCAGAATCTGGAGGATGCTCGAAAGGTGA
AGATCTCGGAGGATCCCAGTCTGCCGGTGGCCCGGAAAATTCGAATCTAC
GAGGGCACTGCCAACCGCGACTCGCGTGTCAAGGTCTACGGTTGGGTGCA
TCGTCTGCGTCGTCAGGGCAAGTCCCTGATCTTCATAACACTGCGCGACG
GCACCGGTTTCCTGCAGTGCGTGCTAAACGATCAGCTCTGCCAGACCTAC
GATGCGCTCACCCTGAGCACGGAAAGCTCTGTAGTCCTGTTCGGTACCCT
GAAACTAGTTCCAGAAGGAAAGACGGCGCCGGGAGGGCATGAACTGAACG
TGGACTACTGGGAGCTGATTGGTCTGGCTCCGCCCGGCGGTGCCGATGCC
ATTCTCAACGAGGAAGCACAACCGGACGTGCAGCTCGACAACCGGCATAT
CATGATTCGTGGAGAGAACACCTCGAAAGTGCTCAAGATGCGATCCGTTG
TGACGCAAGCAT
BS05412.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:04:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10687-PA | 1677 | Aats-asn-RA | 1..796 | 17..812 | 3980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:30:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-asn-RB | 2375 | CG10687-RB | 125..920 | 17..812 | 3980 | 100 | Plus |
| Aats-asn-RA | 1982 | CG10687-RA | 125..920 | 17..812 | 3980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:30:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19130924..19131686 | 812..50 | 3815 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 07:30:45 has no hits.
BS05412.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:10:31 Download gff for
BS05412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10687-PA | 1..796 | 17..812 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:38:44 Download gff for
BS05412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10687-PA | 1..796 | 17..812 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:25:38 Download gff for
BS05412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 119..920 | 10..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:10:30 Download gff for
BS05412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 119..920 | 10..812 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:10:30 Download gff for
BS05412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19130924..19131685 | 51..812 | 100 | <- | Minus |
| 2L | 19131797..19131836 | 10..50 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:25:38 Download gff for
BS05412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19130924..19131685 | 51..812 | 100 | <- | Minus |
| arm_2L | 19131797..19131836 | 10..50 | 92 | | Minus |
BS05412.complete Sequence
1709 bp assembled on 2008-01-02
GenBank Submission: FJ635105
> BS05412.complete
GAAGTTATCAGTCGACATGCCCGCCGATCAGTTGGCTGAGTTAACCTTGG
GTGCAATCTTTACGTCGGAAAAGAAGGGTAGTGATGAGTCCGGCGATGGC
AGTGAGTCCAAGCCCTTCAAGACCATCCTGCAGGCGATGCGTCATGCGGG
CAAGGAACCCTTTCCCACGATTTACGTAGACACCAAGGATCCGAATGCAG
CGGAGCCCTACGAGCCGGCTGCCAAGTCCCAGCTGAAGAAAATTCAGAAA
CTGTTCGTCAGGGAGTCGCACAAGAATGCCGATAAGCTGCAACGGGAGGC
GGAGGATGCGGAGAAGCGCCAGCAGAATCTGGAGGATGCTCGAAAGGTGA
AGATCTCGGAGGATCCCAGTCTGCCGGTGGCCCGGAAAATTCGAATCTAC
GAGGGCACTGCCAACCGCGACTCGCGTGTCAAGGTCTACGGTTGGGTGCA
TCGTCTGCGTCGTCAGGGCAAGTCCCTGATCTTCATAACACTGCGCGACG
GCACCGGTTTCCTGCAGTGCGTGCTAAACGATCAGCTCTGCCAGACCTAC
GATGCGCTCACCCTGAGCACGGAAAGCTCTGTAGTCCTGTTCGGTACCCT
GAAACTAGTTCCAGAAGGAAAGACGGCGCCGGGAGGGCATGAACTGAACG
TGGACTACTGGGAGCTGATTGGTCTGGCTCCGCCCGGCGGTGCCGATGCC
ATTCTCAACGAGGAAGCACAACCGGACGTGCAGCTCGACAACCGGCATAT
CATGATTCGTGGAGAGAACACCTCGAAAGTGCTCAAGATGCGATCCGTTG
TGACGCAAGCATTCCGTGGCCACTACGAGGCGCGTGGCTATAACGAGGTG
ACGCCCCCGACTCTGGTACAGACCCAGGTGGAAGGTGGCTCAACGCTCTT
CAAGCTTAAGTACTTCGGCGAGGAGGCCTACCTCACCCAGAGCTCGCAGC
TATATCTGGAGACCTGCCTGCCGGCATTGGGCGACGTCTTTACCATTTCC
CAGAGCTATCGTGCGGAACAGAGTCGTACGCGGCGTCACTTGGCTGAATA
CACGCACGTGGAGGCCGAGTGTCCGTTCCTAACTTTCGATGATCTGCTTG
ATCGATTGGAGGATCTGGTCTGTGACGTGGTGGATCGTGTTCTGAAGTCC
CCATGGGGTTACTTGGTCAAGGAGCTTAACCCTGACTTCAAACCGCCTCA
GAAGCCGTTCCGTCGCATGAACTACGAGGATGCCATCAAGTGGCTGAAGG
AGAACAACGTGACCAAGGACGATGGCACCTTCTATGAGTTTGGCGAGGAT
ATTCCCGAGGCTCCTGAGCGCAAGATGACCGATACCATCAACGAACCCAT
TATGCTGTGCCGTTTCCCAGCGGAAATCAAGTCCTTCTACATGCAGCGCT
GCAAGGAGGACCAGCGTTTGACCGAGAGCGTGGACGTTCTGCTGCCAAAT
GTGGGCGAAATTGTGGGCGGGTCGATGAGGATCTACGACAGCGAGGAGCT
GCTCAAGGGCTATAAGCGCGAAGGCATTGATCCACAGCCCTACTACTGGT
ACACGGACCAGCGCGTCTATGGAACCATGCCACATGGCGGCTATGGTTTG
GGACTGGAGCGCTTCCTCTGCTGGCTGCTCAACCGCTACCACATCCGCGA
GGTCTGCCTGTACCCTCGATTCCTCGACAGATGCAGGCCCTAGAAGCTTT
CTAGACCAT
BS05412.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:08:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-asn-RB | 1677 | CG10687-PB | 1..1677 | 17..1693 | 8385 | 100 | Plus |
| Aats-asn-RA | 1677 | CG10687-PA | 1..1677 | 17..1693 | 8385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:08:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-asn-RB | 2375 | CG10687-RB | 125..1801 | 17..1693 | 8385 | 100 | Plus |
| Aats-asn-RA | 1982 | CG10687-RA | 125..1801 | 17..1693 | 8385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:08:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19130043..19131686 | 1693..50 | 8220 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:08:53 has no hits.
BS05412.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:05:47 Download gff for
BS05412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 1..1677 | 17..1693 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:33:09 Download gff for
BS05412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 123..1799 | 17..1693 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:44:27 Download gff for
BS05412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 125..1801 | 17..1693 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:05:48 Download gff for
BS05412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 117..1801 | 10..1697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:00:55 Download gff for
BS05412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 125..1801 | 17..1693 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:00:55 Download gff for
BS05412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19130043..19131685 | 51..1693 | 100 | <- | Minus |
| 2L | 19131797..19131830 | 17..50 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:44:27 Download gff for
BS05412.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19130043..19131685 | 51..1693 | 100 | <- | Minus |
| arm_2L | 19131797..19131830 | 17..50 | 100 | | Minus |
BS05412.pep Sequence
Translation from 16 to 1692
> BS05412.pep
MPADQLAELTLGAIFTSEKKGSDESGDGSESKPFKTILQAMRHAGKEPFP
TIYVDTKDPNAAEPYEPAAKSQLKKIQKLFVRESHKNADKLQREAEDAEK
RQQNLEDARKVKISEDPSLPVARKIRIYEGTANRDSRVKVYGWVHRLRRQ
GKSLIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESSVVLFGTLKLVPE
GKTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHIMIRGE
NTSKVLKMRSVVTQAFRGHYEARGYNEVTPPTLVQTQVEGGSTLFKLKYF
GEEAYLTQSSQLYLETCLPALGDVFTISQSYRAEQSRTRRHLAEYTHVEA
ECPFLTFDDLLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRR
MNYEDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDTINEPIMLCRF
PAEIKSFYMQRCKEDQRLTESVDVLLPNVGEIVGGSMRIYDSEELLKGYK
REGIDPQPYYWYTDQRVYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYP
RFLDRCRP*
BS05412.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:38:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-asn-PB | 558 | CG10687-PB | 1..558 | 1..558 | 2954 | 100 | Plus |
| Aats-asn-PA | 558 | CG10687-PA | 1..558 | 1..558 | 2954 | 100 | Plus |
| CG6796-PA | 460 | CG6796-PA | 29..459 | 140..557 | 373 | 25.9 | Plus |
| Aats-asp-PB | 531 | CG3821-PB | 15..531 | 84..558 | 349 | 25 | Plus |
| Aats-asp-PC | 531 | CG3821-PC | 15..531 | 84..558 | 349 | 25 | Plus |
