Clone Sequence Records
BS05437.3prime Sequence
837 bp (798 high quality bases) assembled on 2005-12-02
> BS05437.3prime
ATGGTCTAGAAAGCTTTTAGGCATAAAATTCCGTTTTTCCTTGCGTCTTA
TACGCCTCCTCCTCGATTTTGTACATGTCCATAAGCTTTTGCACGTCGGT
ACTGAATTCCTCGATCTGCTTCGAATGCGCCAACTTTAGTTTCTCCATCG
CACGACCCTGCTTAACTCCGATTTGCTTCTTTTCCTCCATGAAGCGCTTC
ACATTGTTCTGGCGCTTCTCACGCAGCCGACGATCCTTCTCGTTCTTGGT
CTTCAAGGTCTTGTCGTTTTGTACCTCCTTGGCGGTATCCGCCGACATCT
TTGCTTGCTTGGCATTCAGATCCTTGATGTCCCTGGCATGACGATCCTCC
AGCTGCTTGATCTGCGCCGCCTGAACGGTGAGCATCAGTGCCTTCATGGC
GTCCTGCGAGTCCTGGACATGTTGGCGCAGCATGTCCCATTCCTCCTTGC
GGTGCCTGGCGATCATGTCGGTCCACTGCTTGGTCTGGTCATTGATCGAA
TTCTTGATGTTGGCATCGTTACGAATGTCGTCTTTGCTCTTGCCCTTGAT
CAACTTGTCGATGGCCGCATTCTGGGTCTTTTGCACCGAGGTGCGCTCTT
TGGCATGCTTCTTGCGCAGGGTGTCGAGCTCCTTGATTTGCTTTTTGCCC
ACCTTTTGGAAGCCTTTCTCCTGGCGCAGAGATTCCAACGTGACAGGCTC
AAAGACTAGTGGTGGCTCCTTCTTTTCCTCCTCTTTGGCCTTGCCAGCAT
CTCGGGCGGCACCGCCGCTCTGCTCCTCAATGCCAAGTGCCTTCATCTGT
TCGTTTTGCTGCTTAGCGGCACCGGCGAAACCTCGCG
BS05437.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:04:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3620-PB | 3288 | norpA-RB | 2468..3288 | 837..17 | 4105 | 100 | Minus |
| CG3620-PA | 3288 | norpA-RA | 2468..3288 | 837..17 | 4105 | 100 | Minus |
| CG3620-PC | 3288 | norpA-RC | 2468..3288 | 837..17 | 4105 | 100 | Minus |
| CG3620-PD | 3288 | norpA-RD | 2468..3288 | 837..17 | 4105 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:42:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| norpA-RE | 7910 | CG3620-RE | 3716..4536 | 837..17 | 4105 | 100 | Minus |
| norpA-RB | 7112 | CG3620-RB | 3447..4267 | 837..17 | 4105 | 100 | Minus |
| norpA-RA | 7179 | CG3620-RA | 2985..3805 | 837..17 | 4105 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:42:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4359826..4360331 | 837..332 | 2530 | 100 | Minus |
| X | 23542271 | X | 4360393..4360551 | 334..176 | 795 | 100 | Minus |
| X | 23542271 | X | 4360614..4360705 | 177..86 | 460 | 100 | Minus |
| X | 23542271 | X | 4361963..4362034 | 88..17 | 360 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 17:42:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 3929..3990 | 731..792 | 112 | 64.5 | Plus |
BS05437.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:11:13 Download gff for
BS05437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3620-PC | 2468..3288 | 17..837 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:39:41 Download gff for
BS05437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3620-PD | 2468..3288 | 17..837 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:41:05 Download gff for
BS05437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| norpA-RA | 2985..3809 | 11..837 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:10:52 Download gff for
BS05437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| norpA-RA | 2985..3809 | 11..837 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:10:52 Download gff for
BS05437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4360395..4360551 | 176..332 | 100 | -> | Minus |
| X | 4360616..4360705 | 86..175 | 100 | -> | Minus |
| X | 4361966..4362038 | 11..85 | 96 | | Minus |
| X | 4359826..4360330 | 333..837 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:41:05 Download gff for
BS05437.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4253859..4254363 | 333..837 | 100 | -> | Minus |
| arm_X | 4254428..4254584 | 176..332 | 100 | -> | Minus |
| arm_X | 4254649..4254738 | 86..175 | 100 | -> | Minus |
| arm_X | 4255999..4256071 | 11..85 | 96 | | Minus |
BS05437.5prime Sequence
854 bp (775 high quality bases) assembled on 2005-12-02
> BS05437.5prime
GAAGTTATCAGTCGACATGACCAAGAAGTACGAGTTCGATTGGATCATTC
CGGTTCCGCCGGAATTGACCACGGGCTGCGTTTTTGATCGCTGGTTCGAA
AACGAAAAGGAGACAAAGGAGAATGACTTTGAGCGTGATGCCCTCTTCAA
GGTCGATGAATACGGATTTTTTCTGTACTGGAAAAGCGAGGGCAGGGATG
GCGATGTCATAGAGCTCTGCCAAGTGAGCGACATTCGTGCGGGCGGAACA
CCAAAGGATCCGAAGATACTTGATAAGGTGACGAAGAAGAACGGCACCAA
TATACCGGAACTGGATAAGCGATCCCTGACGATCTGTTCGAACACGGACT
ATATCAATATAACATATCACCATGTTATTTGTCCAGATGCGGCAACAGCC
AAGAGCTGGCAAAAGAACTTGCGTCTCATCACGCATAATAACCGCGCCAC
GAATGTGTGCCCGCGCGTCAACCTGATGAAGCATTGGATGCGATTGAGTT
ACTGCGTAGAGAAGAGTGGAAAAATTCCGGTTAAAACGCTGGCCAAAACC
TTTGCATCCGGCAAAACGGAGAAATTGGTGTACACGTGCATAAAGGATGC
CGGTCTGCCCGATGATAAAAACGCAACGATGACCAAGGAGCAGTTCACCT
TCGACAAGTTCTACGCCTTGTACCACAAGGTGTGTCCCCGAAACGACATT
GAGGAGCTCTTCACCTCCATCACCAAGGGCAAGCAGGACTTCATTAGCTT
GGAGCAGTTTATTCAGTTTATGAACGACAAACAGCGCGATCCGCGGATGA
ACGAAATTCTGTACCCTCTCTACGAGGAGAAACGTTGCACGGAGATCATC
AACG
BS05437.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:04:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3620-PB | 3288 | norpA-RB | 1..838 | 17..854 | 4190 | 100 | Plus |
| CG3620-PA | 3288 | norpA-RA | 1..838 | 17..854 | 4190 | 100 | Plus |
| CG3620-PC | 3288 | norpA-RC | 1..394 | 17..410 | 1945 | 99.7 | Plus |
| CG3620-PD | 3288 | norpA-RD | 1..394 | 17..410 | 1945 | 99.7 | Plus |
| CG3620-PC | 3288 | norpA-RC | 466..838 | 482..854 | 1865 | 100 | Plus |
| CG3620-PD | 3288 | norpA-RD | 466..838 | 482..854 | 1865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 03:11:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| norpA-RE | 7910 | CG3620-RE | 1249..2086 | 17..854 | 4190 | 100 | Plus |
| norpA-RB | 7112 | CG3620-RB | 980..1817 | 17..854 | 4190 | 100 | Plus |
| norpA-RA | 7179 | CG3620-RA | 518..1355 | 17..854 | 4190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 03:11:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4357040..4357276 | 484..720 | 1185 | 100 | Plus |
| X | 23542271 | X | 4349408..4349588 | 17..197 | 905 | 100 | Plus |
| X | 23542271 | X | 4353465..4353613 | 255..403 | 745 | 100 | Plus |
| X | 23542271 | X | 4357345..4357478 | 721..854 | 670 | 100 | Plus |
| X | 23542271 | X | 4354469..4354550 | 402..483 | 410 | 100 | Plus |
| X | 23542271 | X | 4349652..4349713 | 196..257 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 03:11:21 has no hits.
BS05437.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:11:14 Download gff for
BS05437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3620-PA | 1..838 | 17..854 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:39:42 Download gff for
BS05437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3620-PA | 1..838 | 17..854 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 04:58:02 Download gff for
BS05437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| norpA-RA | 513..1355 | 9..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:42:18 Download gff for
BS05437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| norpA-RA | 513..1355 | 9..854 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:42:18 Download gff for
BS05437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4353467..4353613 | 257..403 | 100 | -> | Plus |
| X | 4354471..4354550 | 404..483 | 100 | -> | Plus |
| X | 4349403..4349587 | 9..196 | 97 | -> | Plus |
| X | 4349653..4349712 | 197..256 | 100 | -> | Plus |
| X | 4357040..4357276 | 484..720 | 100 | -> | Plus |
| X | 4357345..4357478 | 721..854 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 04:58:02 Download gff for
BS05437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4243436..4243620 | 9..196 | 97 | -> | Plus |
| arm_X | 4243686..4243745 | 197..256 | 100 | -> | Plus |
| arm_X | 4247500..4247646 | 257..403 | 100 | -> | Plus |
| arm_X | 4248504..4248583 | 404..483 | 100 | -> | Plus |
| arm_X | 4251073..4251309 | 484..720 | 100 | -> | Plus |
| arm_X | 4251378..4251511 | 721..854 | 100 | | Plus |
BS05437.complete Sequence
3320 bp assembled on 2008-08-14
GenBank Submission: FJ635113
> BS05437.complete
GAAGTTATCAGTCGACATGACCAAGAAGTACGAGTTCGATTGGATCATTC
CGGTTCCGCCGGAATTGACCACGGGCTGCGTTTTTGATCGCTGGTTCGAA
AACGAAAAGGAGACAAAGGAGAATGACTTTGAGCGTGATGCCCTCTTCAA
GGTCGATGAATACGGATTTTTTCTGTACTGGAAAAGCGAGGGCAGGGATG
GCGATGTCATAGAGCTCTGCCAAGTGAGCGACATTCGTGCGGGCGGAACA
CCAAAGGATCCGAAGATACTTGATAAGGTGACGAAGAAGAACGGCACCAA
TATACCGGAACTGGATAAGCGATCCCTGACGATCTGTTCGAACACGGACT
ATATCAATATAACATATCACCATGTTATTTGTCCAGATGCGGCAACAGCC
AAGAGCTGGCAAAAGAACTTGCGTCTCATCACGCATAATAACCGCGCCAC
GAATGTGTGCCCGCGCGTCAACCTGATGAAGCATTGGATGCGATTGAGTT
ACTGCGTAGAGAAGAGTGGAAAAATTCCGGTTAAAACGCTGGCCAAAACC
TTTGCATCCGGCAAAACGGAGAAATTGGTGTACACGTGCATAAAGGATGC
CGGTCTGCCCGATGATAAAAACGCAACGATGACCAAGGAGCAGTTCACCT
TCGACAAGTTCTACGCCTTGTACCACAAGGTGTGTCCCCGAAACGACATT
GAGGAGCTCTTCACCTCCATCACCAAGGGCAAGCAGGACTTCATTAGCTT
GGAGCAGTTTATTCAGTTTATGAACGACAAACAGCGCGATCCGCGGATGA
ACGAAATTCTGTACCCTCTCTACGAGGAGAAACGTTGCACGGAGATCATC
AACGATTACGAGCTAGATGAGGAGAAAAAGAAGAACGTTCAAATGTCGTT
GGACGGATTTAAGCGCTATCTAATGTCCGACGAAAACGCACCTGTATTCC
TGGACCGGCTGGATTTCTACATGGAAATGGATCAGCCACTGGCCCATTAC
TATATCAACAGCTCGCATAATACCTACCTATCCGGTCGTCAGATCGGCGG
CAAAAGTTCCGTGGAAATGTACCGACAGACACTCTTGGCAGGTTGTCGCT
GTGTGGAGCTGGATTGCTGGAACGGAAAGGGTGAGGACGAGGAGCCAATT
GTCACCCACGGTCACGCCTACTGCACTGAAATCCTCTTTAAGGACTGCAT
CCAGGCGATTGCGGATTGCGCCTTCGTGTCCTCCGAGTATCCGGTAATCC
TGTCCTTCGAAAACCACTGCAACCGCGCCCAGCAATACAAGTTGGCCAAA
TACTGTGATGACTTCTTCGGCGATCTGCTGCTAAAGGAGCCGCTACCAGA
TCATCCGCTGGATCCGGGCCTTCCGTTGCCGCCACCCTGCAAACTGAAGC
GTAAGATCCTCATCAAGAACAAGCGAATGAAGCCAGAAGTGGAAAAGGTC
GAGTTGGAGCTCTGGCTGAAGGGCGAACTCAAAACGGATGACGATCCGGA
AGAGGACGCCAGTGCGGGCAAGCCGCCAGAGGCAGCCGCCGCACCCGCAC
CCGCCCCGGAAGCAGCCGCCGCCGCCGAAGGAGCGGCCGAGGGGGGCGGT
GGAGCGGAGGCCGAAGCCGCCGCTGCCAACTACAGCGGCTCCACCACCAA
CGTGCATCCGTGGCTCTCCTCCATGGTCAATTACGCGCAGCCCATCAAGT
TCCAGGGCTTCGACAAGGCAATCGAAAAGAATATTGCCCACAACATGTCC
TCGTTTGCGGAATCGGCGGGCATGAACTACTTGAAGCAGAGCTCCATCGA
CTTTGTCAATTACAACAAGCGTCAGATGTCGCGAATTTATCCGAAGGGCA
CACGAGCGGACTCCTCAAACTATATGCCGCAGGTGTTCTGGAACGCCGGC
TGCCAGATGGTCTCACTCAATTTCCAGAGCTCCGATTTACCCATGCAACT
CAACCAGGGCAAGTTCGAGTATAATGGCGGCTGTGGCTATCTACTAAAAC
CGGATTTCATGCGTCGAGCCGACAAGGATTTTGATCCGTTTGCCGATGCG
CCGGTGGACGGTGTGATTGCGGCCCAGTGTTCCGTTAAAGTGATTGCCGG
CCAATTCTTGTCCGACAAGAAAGTGGGCACCTATGTGGAGGTGGACATGT
TTGGATTGCCCTCGGACACGGTGAAAAAAGAGTTTCGAACGCGTTTGGTC
GCCAATAATGGCCTGAATCCAGTTTACAATGAGGATCCCTTTGTGTTCCG
CAAAGTGGTCCTTCCGGACTTGGCTGTGCTAAGATTTGGCGTTTATGAAG
AAAGCGGAAAGATTCTGGGTCAACGTATTCTGCCGCTGGACGGTTTGCAG
GCTGGCTATCGGCATGTTTCCCTGCGCACGGAGGCTAACTTCCCCATGTC
GTTGCCCATGTTGTTCGTGAATATCGAGCTAAAGATCTACGTACCTGACG
GCTTTGAGGACTTCATGGCCATGTTGTCGGATCCGCGAGGTTTCGCCGGT
GCCGCTAAGCAGCAAAACGAACAGATGAAGGCACTTGGCATTGAGGAGCA
GAGCGGCGGTGCCGCCCGAGATGCTGGCAAGGCCAAAGAGGAGGAAAAGA
AGGAGCCACCACTAGTCTTTGAGCCTGTCACGTTGGAATCTCTGCGCCAG
GAGAAAGGCTTCCAAAAGGTGGGCAAAAAGCAAATCAAGGAGCTCGACAC
CCTGCGCAAGAAGCATGCCAAAGAGCGCACCTCGGTGCAAAAGACCCAGA
ATGCGGCCATCGACAAGTTGATCAAGGGCAAGAGCAAAGACGACATTCGT
AACGATGCCAACATCAAGAATTCGATCAATGACCAGACCAAGCAGTGGAC
CGACATGATCGCCAGGCACCGCAAGGAGGAATGGGACATGCTGCGCCAAC
ATGTCCAGGACTCGCAGGACGCCATGAAGGCACTGATGCTCACCGTTCAG
GCGGCGCAGATCAAGCAGCTGGAGGATCGTCATGCCAGGGACATCAAGGA
TCTGAATGCCAAGCAAGCAAAGATGTCGGCGGATACCGCCAAGGAGGTAC
AAAACGACAAGACCTTGAAGACCAAGAACGAGAAGGATCGTCGGCTGCGT
GAGAAGCGCCAGAACAATGTGAAGCGCTTCATGGAGGAAAAGAAGCAAAT
CGGAGTTAAGCAGGGTCGTGCGATGGAGAAACTAAAGTTGGCGCATTCGA
AGCAGATCGAGGAATTCAGTACCGACGTGCAAAAGCTTATGGACATGTAC
AAAATCGAGGAGGAGGCGTATAAGACGCAAGGAAAAACGGAATTTTATGC
CTAAAAGCTTTCTAGACCAT
BS05437.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:02:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| norpA-RE | 3288 | CG3620-PE | 1..3288 | 17..3304 | 16440 | 100 | Plus |
| norpA-RB | 3288 | CG3620-PB | 1..3288 | 17..3304 | 16440 | 100 | Plus |
| norpA-RA | 3288 | CG3620-PA | 1..3288 | 17..3304 | 16440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:02:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| norpA-RE | 7910 | CG3620-RE | 1249..4536 | 17..3304 | 16440 | 100 | Plus |
| norpA-RB | 7112 | CG3620-RB | 980..4267 | 17..3304 | 16440 | 100 | Plus |
| norpA-RA | 7179 | CG3620-RA | 518..3805 | 17..3304 | 16440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:02:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4359066..4360331 | 1724..2989 | 6330 | 100 | Plus |
| X | 23542271 | X | 4358504..4358871 | 1357..1724 | 1840 | 100 | Plus |
| X | 23542271 | X | 4357575..4357881 | 887..1193 | 1535 | 100 | Plus |
| X | 23542271 | X | 4357040..4357276 | 484..720 | 1185 | 100 | Plus |
| X | 23542271 | X | 4349408..4349588 | 17..197 | 905 | 100 | Plus |
| X | 23542271 | X | 4357345..4357511 | 721..887 | 835 | 100 | Plus |
| X | 23542271 | X | 4358274..4358440 | 1191..1357 | 835 | 100 | Plus |
| X | 23542271 | X | 4360393..4360551 | 2987..3145 | 795 | 100 | Plus |
| X | 23542271 | X | 4353465..4353613 | 255..403 | 745 | 100 | Plus |
| X | 23542271 | X | 4360614..4360705 | 3144..3235 | 460 | 100 | Plus |
| X | 23542271 | X | 4354469..4354550 | 402..483 | 410 | 100 | Plus |
| X | 23542271 | X | 4361963..4362034 | 3233..3304 | 360 | 100 | Plus |
| X | 23542271 | X | 4349652..4349713 | 196..257 | 310 | 100 | Plus |
| 2L | 23513712 | 2L | 343005..343158 | 1864..2017 | 200 | 75.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:02:08 has no hits.
BS05437.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:51:01 Download gff for
BS05437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| norpA-RA | 513..3809 | 9..3310 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:35:15 Download gff for
BS05437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| norpA-RA | 518..3803 | 17..3302 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:00:18 Download gff for
BS05437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| norpA-RA | 518..3803 | 17..3302 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:11:14 Download gff for
BS05437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| norpA-RA | 518..3803 | 17..3302 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:11:14 Download gff for
BS05437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4358505..4358871 | 1358..1724 | 100 | -> | Plus |
| X | 4349408..4349587 | 17..196 | 100 | -> | Plus |
| X | 4349653..4349712 | 197..256 | 100 | -> | Plus |
| X | 4353467..4353613 | 257..403 | 100 | -> | Plus |
| X | 4354471..4354550 | 404..483 | 100 | -> | Plus |
| X | 4357040..4357276 | 484..720 | 100 | -> | Plus |
| X | 4357345..4357511 | 721..887 | 100 | -> | Plus |
| X | 4357576..4357880 | 888..1192 | 100 | -> | Plus |
| X | 4358276..4358440 | 1193..1357 | 100 | -> | Plus |
| X | 4359067..4360330 | 1725..2988 | 100 | -> | Plus |
| X | 4360395..4360551 | 2989..3145 | 100 | -> | Plus |
| X | 4360616..4360705 | 3146..3235 | 100 | -> | Plus |
| X | 4361966..4362032 | 3236..3302 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:35:15 Download gff for
BS05437.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4243441..4243620 | 17..196 | 100 | -> | Plus |
| arm_X | 4243686..4243745 | 197..256 | 100 | -> | Plus |
| arm_X | 4247500..4247646 | 257..403 | 100 | -> | Plus |
| arm_X | 4248504..4248583 | 404..483 | 100 | -> | Plus |
| arm_X | 4251073..4251309 | 484..720 | 100 | -> | Plus |
| arm_X | 4251378..4251544 | 721..887 | 100 | -> | Plus |
| arm_X | 4251609..4251913 | 888..1192 | 100 | -> | Plus |
| arm_X | 4252309..4252473 | 1193..1357 | 100 | -> | Plus |
| arm_X | 4252538..4252904 | 1358..1724 | 100 | -> | Plus |
| arm_X | 4253100..4254363 | 1725..2988 | 100 | -> | Plus |
| arm_X | 4254428..4254584 | 2989..3145 | 100 | -> | Plus |
| arm_X | 4254649..4254738 | 3146..3235 | 100 | -> | Plus |
| arm_X | 4255999..4256065 | 3236..3302 | 100 | | Plus |
BS05437.pep Sequence
Translation from 16 to 3303
> BS05437.pep
MTKKYEFDWIIPVPPELTTGCVFDRWFENEKETKENDFERDALFKVDEYG
FFLYWKSEGRDGDVIELCQVSDIRAGGTPKDPKILDKVTKKNGTNIPELD
KRSLTICSNTDYINITYHHVICPDAATAKSWQKNLRLITHNNRATNVCPR
VNLMKHWMRLSYCVEKSGKIPVKTLAKTFASGKTEKLVYTCIKDAGLPDD
KNATMTKEQFTFDKFYALYHKVCPRNDIEELFTSITKGKQDFISLEQFIQ
FMNDKQRDPRMNEILYPLYEEKRCTEIINDYELDEEKKKNVQMSLDGFKR
YLMSDENAPVFLDRLDFYMEMDQPLAHYYINSSHNTYLSGRQIGGKSSVE
MYRQTLLAGCRCVELDCWNGKGEDEEPIVTHGHAYCTEILFKDCIQAIAD
CAFVSSEYPVILSFENHCNRAQQYKLAKYCDDFFGDLLLKEPLPDHPLDP
GLPLPPPCKLKRKILIKNKRMKPEVEKVELELWLKGELKTDDDPEEDASA
GKPPEAAAAPAPAPEAAAAAEGAAEGGGGAEAEAAAANYSGSTTNVHPWL
SSMVNYAQPIKFQGFDKAIEKNIAHNMSSFAESAGMNYLKQSSIDFVNYN
KRQMSRIYPKGTRADSSNYMPQVFWNAGCQMVSLNFQSSDLPMQLNQGKF
EYNGGCGYLLKPDFMRRADKDFDPFADAPVDGVIAAQCSVKVIAGQFLSD
KKVGTYVEVDMFGLPSDTVKKEFRTRLVANNGLNPVYNEDPFVFRKVVLP
DLAVLRFGVYEESGKILGQRILPLDGLQAGYRHVSLRTEANFPMSLPMLF
VNIELKIYVPDGFEDFMAMLSDPRGFAGAAKQQNEQMKALGIEEQSGGAA
RDAGKAKEEEKKEPPLVFEPVTLESLRQEKGFQKVGKKQIKELDTLRKKH
AKERTSVQKTQNAAIDKLIKGKSKDDIRNDANIKNSINDQTKQWTDMIAR
HRKEEWDMLRQHVQDSQDAMKALMLTVQAAQIKQLEDRHARDIKDLNAKQ
AKMSADTAKEVQNDKTLKTKNEKDRRLREKRQNNVKRFMEEKKQIGVKQG
RAMEKLKLAHSKQIEEFSTDVQKLMDMYKIEEEAYKTQGKTEFYA*
BS05437.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:20:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| norpA-PE | 1095 | CG3620-PE | 1..1095 | 1..1095 | 5774 | 100 | Plus |
| norpA-PB | 1095 | CG3620-PB | 1..1095 | 1..1095 | 5774 | 100 | Plus |
| norpA-PA | 1095 | CG3620-PA | 1..1095 | 1..1095 | 5774 | 100 | Plus |
| norpA-PC | 1095 | CG3620-PC | 1..1095 | 1..1095 | 5699 | 98.7 | Plus |
| norpA-PD | 1095 | CG3620-PD | 1..1095 | 1..1095 | 5699 | 98.7 | Plus |
