Clone Sequence Records
BS05441.3prime Sequence
936 bp (774 high quality bases) assembled on 2005-12-02
> BS05441.3prime
ATGGTCTAGAAAGCTTTTAGCCGGCATTCAGTAGTAGTTCAGCTGCCACC
TCTAAGCTCCAGTTGGTCTGCTGCAGCGCCTGTTCGCACTGTGGTCGCCC
AGCCACCCCAAGCCTCGCCAGTTGGTCGATTTTGTAGTGCCGCGTGGCTA
GTCCAACATCTCCGCTGGCCGCACGCAGTGCATTGCGCACATCCTGCTCC
ACCGCGGAGCTGCCCAGCTCTTGCATTAGCTGCTGGAGCTTCTCCTGCTC
GCGACCGTAGTCCGAGGGCACTGGCGCATACAGCTGATGGGCTCCGTCCA
GCTGCTGCTGTTGCTGCAGCCGCATCTTCTCCATCCTTCGTTGGATCTGC
TGCGCGGAGAGAGGAGGTGGCGCCAATGGAGCTGGTCGCGTTGGCCGCAG
GTAGTCATCCTGAGTCACTTCATCGTACAGAACAGCTCCACTGCCATTCG
GCACTTGGCCGTAGTATGTGGAGCCCGCCGTGCTGGCCGCCACTGCATCG
TACAGCGAGGCGGTTGAGGAGTACGCATTGTTTTTGGGTGCCACCACTCG
ATTGGATATTGCAACAAACGAATGGTTCAACTCCTGCTGCTGCTGCTGCT
GGTGGCGATGGTTTTGGTAGATCTGCTCCTCTGCCTGCTCTGTCGGCGGC
TGGGCATAGTACTCGGACTGCGTGGACGCCACTTGCTCATACCAAATACG
ATTCACCACACTTTGCGTGGTAGCTGCCGCAGCAGCTGCTGCCTCCACAT
TGTTCTGCTTGGGCGACGCGGTCGAAGAGGGACTGGAATGATTCGAGTGA
ACTGACCCGGGTGCTGCACCGTTCTTTAAAGGTGTGAGATTCTGCTTATA
CACCATATCCCTGCTGGCATACATCTGCGTAAAATTGCGCTGGTACTCCT
CCTGCGCTCTGTTTTGCCCCGTGCTGTACATGTCCT
BS05441.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:04:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14992-PA | 3222 | Ack-RA | 2303..3222 | 936..17 | 4475 | 99.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 02:04:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ack-RA | 4393 | CG14992-RA | 3104..4024 | 936..16 | 4530 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 02:03:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4112868..4113788 | 936..16 | 4530 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-09 02:03:59 has no hits.
BS05441.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:11:21 Download gff for
BS05441.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-PA | 2303..3222 | 17..936 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:39:53 Download gff for
BS05441.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14992-PA | 2303..3222 | 17..936 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 06:00:22 Download gff for
BS05441.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 3104..4024 | 16..936 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:13:00 Download gff for
BS05441.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 3104..4024 | 16..936 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:13:00 Download gff for
BS05441.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4112868..4113788 | 16..936 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 06:00:22 Download gff for
BS05441.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4112868..4113788 | 16..936 | 99 | | Minus |
BS05441.5prime Sequence
844 bp (775 high quality bases) assembled on 2005-12-02
> BS05441.5prime
GAAGTTATCAGTCGACATGACCTCCACTTCGGCGGTGGATGGTGGGCTCG
GGAGCGAGACGGCCTGGCTGGAGGATCTGCTGCGGGAGGTGCAGCTGGAG
CAGTTTCTGGACAGGATACGGGACGACCTACAGGTGACCCGGCTGGCGCA
CTTCGACTACGTGCTACCTGACGATCTGGAGCGATGTGGTCTGGGGAAAC
CGGCTATTCGACGGCTGATGGAGGCAGTGCGGAAAAAGAAGGCCCACCAG
TGGCGCAAGAACATCCTGTCCAAACTAATTGGCGGTGGCAAGCAACCCTC
GTCCAAGAAGCAGTCCTCCGCCGCCCGGGAATCCAGTCAGGGCAATGGCA
CCCAGCTTACCTGCCTTATCCACGAAAAGGACATCACAATGGGACTGAAA
CTGGGCGACGGATCATTCGGTGTGGTGCGTCGCGGCGAATGGAGTGCTTC
GCCGGCGGGCAAGGTCATCCCGGTGGCCGTCAAGGTGCTGAAGTCGGACA
ACCTCACCCAACCGGGCATCATCGATGACTTCTTCCGCGAGGTTCAGGCT
ATGCACGCCCTGGATCATGCGAATCTGGTGCGGCTTTACGGCGTCGTCTT
ATCCCAGCCGATGATGATGATTACAGAGCTGGCGGAGCGCGGGTCGCTGC
TGGATACGTTGCGAAAACAATGCCGCCACACCTCGCTGACCATCATCTGG
AACTGGTCGGTGCAGATTGTGACTGGCATGGCCTATCTGGAACAGAAGCG
CTTTCTACATCGCGATCTGGCATGTCGGGATGTCCTCCTGGCAGCTGGAA
AACAGATCAAGATCGGAGATTTTGGCCTAATGCGTGCCTTGCCC
BS05441.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:04:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14992-PA | 3222 | Ack-RA | 1..828 | 17..844 | 4065 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:55:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ack-RA | 4393 | CG14992-RA | 802..1629 | 17..844 | 4095 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:55:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4110501..4111328 | 17..844 | 4095 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-12 18:55:57 has no hits.
BS05441.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:11:22 Download gff for
BS05441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-PA | 1..828 | 17..844 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:39:54 Download gff for
BS05441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14992-PA | 1..828 | 17..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:39:16 Download gff for
BS05441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 792..1629 | 7..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:25:26 Download gff for
BS05441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 792..1629 | 7..844 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:25:26 Download gff for
BS05441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4110494..4111328 | 8..844 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:39:16 Download gff for
BS05441.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4110494..4111328 | 8..844 | 99 | | Plus |
BS05441.complete Sequence
3254 bp assembled on 2008-08-15
GenBank Submission: KX794763
> BS05441.complete
GAAGTTATCAGTCGACATGACCTCCACTTCGGCGGTGGATGGTGGGCTCG
GGAGCGAGACGGCCTGGCTGGAGGATCTGCTGCGGGAGGTGCAGCTGGAG
CAGTTTCTGGACAGGATACGGGACGACCTACAGGTGACCCGGCTGGCGCA
CTTCGACTACGTGCTACCTGACGATCTGGAGCGATGTGGTCTGGGGAAAC
CGGCTATTCGACGGCTGATGGAGGCAGTGCGGAAAAAGAAGGCCCACCAG
TGGCGCAAGAACATCCTGTCCAAACTAATTGGCGGTGGCAAGCAACCCTC
GTCCAAGAAGCAGTCCTCCGCCGCCCGGGAATCCAGTCAGGGCAATGGCA
CCCAGCTTACCTGCCTTATCCACGAAAAGGACATCACAATGGGACTGAAA
CTGGGCGACGGATCATTCGGTGTGGTGCGTCGCGGCGAATGGAGTGCTTC
GCCGGCGGGCAAGGTCATCCCGGTGGCCGTCAAGGTGCTGAAGTCGGACA
ACCTCACCCAACCGGGCATCATCGATGACTTCTTCCGCGAGGTTCAGGCT
ATGCACGCCCTGGATCATGCGAATCTGGTGCGGCTTTACGGCGTCGTCTT
ATCCCAGCCGATGATGATGATTACAGAGCTGGCGGAGCGCGGGTCGCTGC
TGGATACGTTGCGAAAACAATGCCGCCACACCTCGCTGACCATCATCTGG
AACTGGTCGGTGCAGATTGTGACTGGCATGGCCTATCTGGAACAGAAGCG
CTTTCTACATCGCGATCTGGCATGTCGGAATGTCCTCCTGGCAGCTGGAA
ACAAGATCAAGATCGGAGATTTTGGCCTAATGCGTGCCTTGCCCCAAGAG
GATGATTGCTATGTGATGTCTGAGCATAAGAAGGTGCCTTTTCCCTGGTG
CGCTCCTGAATCGCTGCGCTTCCGGCAGTTCTCGCACGCCTCTGACACCT
GGATGTTTGGCGTGACGCTGTGGGAGATGTTTAGCTTTGGCGAAGATCCA
TGGGTGGGACTCAATGGATCGCAGATCCTGCGCAAAATCGATCGCGAAGG
CGAGCGACTGCATCAGCCGGATGCCTGTCCACCGGACGTTTATGCTATGA
TGCTGCAATGCTGGGATAAAACTCCAGCAGAGCGACCCACTTTTGCTGCT
CTCAAAGAATATTTGGCCAGTATGTCGCCTCCTGTGATGCGTGCTTCCCG
AAGTCACCACGAGTCCAAGGGACTGCAGATCGAGCCTGGCGACACAATCG
CCATTATCGATGGACGGCACGAGCTGAAATTGATAAAGGGCCAGAACCAG
CGAACATTCGATATAGGAATCTTTCCCAGAAACCTACTGGAGCAGCGCAA
AGTGGGTGCTGCCGGAGATGTGGTAATGCGAAGCAGCGTTGGAAATGGTT
CGTCGTCTTCGCCATTCGGCTTTTGTTGGGGCGGAGCAGCTGCAATGGCC
AACGGAGATGATCGACAGCGAAAGTGTGCCTCGATGACAAACCAGCCCCA
TGCCAAGGAGCGCAAGTCCACGTCCAGCAAGCAGTTTGCGTACAACAAAC
TGGTTAATGATTCCGCTACTGGTCTTCAGCGACGAAATGCAGTGAAGCAC
AAAGGAGTGGTGGTGGGCCCGCAGCGTCCTCCGCCGCCACAATTTCAACA
GGAGGGCATACTCATCGACATCTCGCCCGATATGCGACCCATAGCCGAAG
CTGGAACAGGAGGAGCTAAGGGAGCAGGCGATAGTTCCTCACTGCAGGCG
GACAGCTCGTTTTGCATACTAGACGCTCCCATAGATGTGCCCACTTATGC
CGGCTCCAGTGGATCGGGGGATCTTAATGTCTCGCCCACGTACTACAATG
AGCAGCCGCAGTTCGACTTTGATCCGGCCAAGATGACAGCTTCACCAGGG
CGCCTGCAACCGCCGCCGTACCAGATGCCACCAACTTACTCGAATACAAT
GGAGTTTGTCCAAAAACGAGACCTTCACCAACAGCAGCTAGCGACGCCTG
TAAGGGAGCGAGATCCCTTCGACACCACAAACGTTGAAACGACTGTGGCA
CTCTACTCGAATTTCAACCAGTCTCTGGAAGCAGCTTCTCCACCAGCACC
GATTTATAATAGTCCTTCGGTCAGGAAGAGCCTTTTCGGTGGCTCCAAGT
CGAATAAAGAAAACATACCTGCCCTGGAATCAGCGGCTATGCAGCTAAAT
CTCAGTAATCTTACATTGGAGCGACACGACGCCACCTGCATTCAGCCAGT
GGAGCCTGTACCTGCTCCTCCTGGTGATGGAGTACTGCTGGACAAGTCCT
TCATCGCCGAACTGGAGAAGGACATGTACAGCAACGGGCAAAACAGAGCG
CAGGAGGAGTACCAGCGCAATTCTACGCAGATGTATGCCAGCAAGGATAT
GGTGTATAAGCAGAATCTCACACCCTTAAAGAACGGTGCAGCACCCGGGT
CAGTTCACTCGAATCATTCCAGTCCCTCTTCGACCGCGTCGCCCAAGCAG
AACAATGTGGAGGCAGCAGCTGCTGCGGCAGCTACCACGCAAAGTGTGGT
GAATCGTATTTGGTATGAGCAAGTGGCGTCCACGCAGTCCGAGTACTATG
CCCAGCCGCCGACAGAGCAGGCAGAGGAGCAGATCTACCAAAACCATCGC
CACCAGCAGCAGCAGCAGCAGGAGTTGAACCATTCGTTTGTTGCAATATC
CAATCGAGTGGTGGCACCCAAAAACAATGCGTACTCCTCAACCGCCTCGC
TGTACGATGCAGTGGCGGCCAGCACGGCGGGCTCCACATACTACGGCCAA
GTGCCGAATGGCAGTGGAGCTGTTCTGTACGATGAAGTGACTCAGGATGA
CTACCTGCGGCCAACGCGACCAGCTCCATTGGCGCCACCTCCTCTCTCCG
CGCAGCAGATCCAACGAAGGATGGAGAAGATGCGGCTGCAGCAACAGCAG
CAGCTGGACGGAGCCCATCAGCTGTATGCGCCAGTGCCCTCGGACTACGG
TCGCGAGCAGGAGAAGCTCCAGCAGCTAATGCAAGAGCTGGGCAGCTCCG
CGGTGGAGCAGGATGTGCGCAATGCACTGCGTGCGGCCAGCGGAGATGTT
GGACTAGCCACGCGGCACTACAAAATCGACCAACTGGCGAGGCTTGGGGT
GGCTGGGCGACCACAGTGCGAACAGGCGCTGCAGCAGACCAACTGGAGCT
TAGAGGTGGCAGCTGAACTACTACTGAATGCCGGCTAAAAGCTTTCTAGA
CCAT
BS05441.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:24:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ack-RA | 3222 | CG14992-PA | 1..3222 | 17..3238 | 16110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:24:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ack-RA | 4393 | CG14992-RA | 802..4024 | 17..3239 | 16115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:24:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4111705..4113788 | 1156..3239 | 10420 | 100 | Plus |
| 3L | 28110227 | 3L | 4110501..4111639 | 17..1155 | 5695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:24:06 has no hits.
BS05441.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:26:30 Download gff for
BS05441.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 773..4005 | 7..3239 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:01 Download gff for
BS05441.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 802..4021 | 17..3236 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:17:40 Download gff for
BS05441.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 783..4002 | 17..3236 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:24:44 Download gff for
BS05441.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 802..4021 | 17..3236 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:24:44 Download gff for
BS05441.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4110501..4111639 | 17..1155 | 100 | -> | Plus |
| 3L | 4111705..4113785 | 1156..3236 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:01 Download gff for
BS05441.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4110501..4111639 | 17..1155 | 100 | -> | Plus |
| arm_3L | 4111705..4113785 | 1156..3236 | 100 | | Plus |
BS05441.pep Sequence
Translation from 16 to 3237
> BS05441.pep
MTSTSAVDGGLGSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
SAARESSQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRNLLEQRKVGAAG
DVVMRSSVGNGSSSSPFGFCWGGAAAMANGDDRQRKCASMTNQPHAKERK
STSSKQFAYNKLVNDSATGLQRRNAVKHKGVVVGPQRPPPPQFQQEGILI
DISPDMRPIAEAGTGGAKGAGDSSSLQADSSFCILDAPIDVPTYAGSSGS
GDLNVSPTYYNEQPQFDFDPAKMTASPGRLQPPPYQMPPTYSNTMEFVQK
RDLHQQQLATPVRERDPFDTTNVETTVALYSNFNQSLEAASPPAPIYNSP
SVRKSLFGGSKSNKENIPALESAAMQLNLSNLTLERHDATCIQPVEPVPA
PPGDGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKDMVYKQN
LTPLKNGAAPGSVHSNHSSPSSTASPKQNNVEAAAAAAATTQSVVNRIWY
EQVASTQSEYYAQPPTEQAEEQIYQNHRHQQQQQQELNHSFVAISNRVVA
PKNNAYSSTASLYDAVAASTAGSTYYGQVPNGSGAVLYDEVTQDDYLRPT
RPAPLAPPPLSAQQIQRRMEKMRLQQQQQLDGAHQLYAPVPSDYGREQEK
LQQLMQELGSSAVEQDVRNALRAASGDVGLATRHYKIDQLARLGVAGRPQ
CEQALQQTNWSLEVAAELLLNAG*
BS05441.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:33:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ack-PA | 1073 | CG14992-PA | 1..1073 | 1..1073 | 5590 | 100 | Plus |
| Ack-like-PA | 1337 | CG43741-PA | 8..430 | 18..415 | 685 | 37.9 | Plus |
| Ack-like-PD | 1338 | CG43741-PD | 8..430 | 18..415 | 685 | 37.9 | Plus |
| Ack-like-PC | 1475 | CG43741-PC | 8..430 | 18..415 | 685 | 37.9 | Plus |
| Ack-like-PE | 1495 | CG43741-PE | 8..430 | 18..415 | 685 | 37.9 | Plus |
