Clone Sequence Records
BS05447.complete Sequence
2369 bp assembled on 2009-12-07
GenBank Submission: KX796520
> BS05447.complete
GAAGTTATCAGTCGACATGGCTGGAGATGATCTGATTGCGAAATTCCAGG
CGCTCGGCATGAGCGAGCAAAAGGCGAAGGAAACTTTGAAGAATGCCAAC
GTGACAAAGAATCTCCAGCTGTCGCTGGCGGCGGCGGGAAGCGCCACCCT
ATCCGACGGCACTGGTATGCTGATCTACCACATGGCTACCAAGCTGAAGC
CGCAGACTGCGGACCATCTGCCTCTTCTGGTGCGCTACATAGTGGAGCAC
AAGCTGGACAACACTCAGCGCGTTGATGCCGCCCTGGAGTACCTGCTCAA
GTGCGGTCAGAGCCTGAATGCCAACATAGATCTGCAGGCGCTTGAGAAGG
AGTGCGGCGTTGGAGTGGTGGTCACTCCGGAGCAGATCGAGCGCACTGTG
CAGGCCAAGATCAAGGCCAGCTACAAGGAGGCCTTGTTGGAGCAACGCTA
CCATTTTAACTCTTTTAAAATCCTGCAAGATGTCCGGGGAGAACTCAAGT
GGGCGGATGCCAAGTCCGTGAAGGCGGCCATCGATGTGGAGATCTTCGAT
CTGTTGGGTCCCAAAACAGAAGCAGACTTGAAACCTCAGACAAAAGCAAA
CGATAAGCCGAAGGCTGCAAAACCGAAAGCTGAAGTAACTCCTGCCGCTC
AAACGGCTGAAGCTGCATCCGATGGAGCCACCACCATTTCGGAACTCATG
AAAACCAAGGTACACTTCCATGCTCCCGGAGAGAACTTCAAGGCAGATGG
CTACGTGGTCACCGAGCACACGGAGCGGCTACTAAAGGAGCACCTGGCGA
GAACTGGAGGCAAAGTGCACACACGATTTCCGCCAGAGCCGAATGGCATC
CTGCACATCGGTCACGCAAAGGCTATTAACATTAACTTTGGATACGCGGC
TGCCCACGATGGAGTCTGTTACTTGCGCTACGACGACACCAATCCCGAGA
AGGAGGAGGAGAAGTTCTTTTTGGCCATCAAGGAGATGGTGGAATGGCTG
GGCTACAAACCATTCAAGATCACCTACTCCTCGGACAACTTCCAGCAGCT
GTACGAGTGGGCTGTTGTGCTGATTAACAAAGGATTGGCCTACGTGTGTC
ACCAGAAGGCGGAGGAACTGAAAGGCTTCAATCCGAAGCCCAGCCCTTGG
AGGGAGCGTCCCATTGAGGAGTCACTTCGGCTGTTTGAAGACATGAAGCG
TGGAAAGATCGACGAGGGAGCGGCCACACTGCGCATGAAGGTCACCCTGG
AGGAGGGCAAGATGGACCCGGTGGCGTATCGCATTAAGTTTATCTCACAC
CACCGTACGGGCTCTGACTGGTGCATTTACCCCACGTATGATTATACTCA
TTGCCTTTGTGACTCTCTCGAGGATATAACCCACTCACTGTGCACCAAGG
AGTTCCAGTCGAGACGATCCTCCTACTACTGGCTGTGCAACGCTTTGGGT
ATCTACTGCCCGGTGCAGTGGGAATACGGTAGGCTGAACATGAACTACGC
ACTTGTGTCAAAGCGCAAGATTGCAAAGCTGATCACGGAGCAGATTGTCC
ACGACTGGGACGATCCCAGGCTGTTTACTCTGACGGCTCTGAGACGTAGA
GGCTTCCCAGCAGAGGCCATCAACAACTTCTGCGCCCAGATGGGCGTAAC
GGGTGCCCAGATCGCCGTCGACCCCGCCATGTTGGAGGCAGCAGTGCGGG
ATGTGCTAAATGTTACAGCTCCCCGTCGGTTGGTTGTCCTGGAACCGCTC
AAAGTTACCATAAAGAATTTCCCTCATGCAGCGCCCGTGCAGCTAGAAGT
GCCTGATTTCCCGCAAAACCCACAGCAAGGAACTCATAAGATCACCCTAG
ACAAGGTGATCTATATTGAGCAGGGAGACTTCAAGTTGGAGCCTGAAAAG
GGATACCGTCGTCTGGCACCGAAGCAATCTGTGGGTCTCCGGCACGCGGG
TCTCGTAATCAGCGTGGATGAGATAGTAAAGGATCCGGCGACTGGTCAGG
TGGTGGAACTAATCTGCACCAGCCAACCTGCCGAGCAGGCCGAGAAGCCC
AAGGCTTTTGTCCAGTGGGTATCGCAGCCGATACAGCTGGAAGTGCGTCT
GTACGAGCAGCTCTTCAAGCACAAGAATCCCGAGGATCCCAACGAGGTGC
CCGGCGGTTTCCTGAGCGACATCAGTGAGCAATCCATGTCGGTGGTGGTG
GCATTCGCGGATCGGGCCCTAAACCAGGCCAAGGTTTACGACAAGTTCCA
GTTCGAGAGGATTGGCTTCTTCTCCGTAGATCCTGACACCAGTGCGAACC
ACCTAGTGTTCAACCGCACTGTGGGATTGAAGGAAGATGCGGGCAAGAAG
TGAAAGCTTTCTAGACCAT
BS05447.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:09:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gln-RA | 2337 | CG10506-PA | 1..2337 | 17..2353 | 11685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:09:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gln-RA | 2455 | CG10506-RA | 48..2385 | 17..2354 | 11690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:09:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25263337..25265674 | 2354..17 | 11690 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:09:33 has no hits.
BS05447.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:51:26 Download gff for
BS05447.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 48..2383 | 17..2352 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:18 Download gff for
BS05447.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 48..2383 | 17..2352 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:58:19 Download gff for
BS05447.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 48..2383 | 17..2352 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:05 Download gff for
BS05447.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 48..2383 | 17..2352 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:05 Download gff for
BS05447.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25263339..25265674 | 17..2352 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:18 Download gff for
BS05447.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21089061..21091396 | 17..2352 | 100 | | Minus |
BS05447.3prime Sequence
930 bp (788 high quality bases) assembled on 2005-12-02
> BS05447.3prime
ATGGTCTAGAAAGCTTTCACTTCTTGCCCGCATCTTCCTTCAATCCCACA
GTGCGGTTGAACACTAGGTGGTTCGCACTGGTGTCAGGATCTACGGAGAA
GAAGCCAATCCTCTCGAACTGGAACTTGTCGTAAACCTTGGCCTGGTTTA
GGGCCCGATCCGCGAATGCCACCACCACCGACATGGATTGCTCACTGATG
TCGCTCAGGAAACCGCCGGGCACCTCGTTGGGATCCTCGGGATTCTTGTG
CTTGAAGAGCTGCTCGTACAGACGCACTTCCAGCTGTATCGGCTGCGATA
CCCACTGGACAAAAGCCTTGGGCTTCTCGGCCTGCTCGGCAGGTTGGCTG
GTGCAGATTAGTTCCACCACCTGACCAGTCGCCGGATCCTTTACTATCTC
ATCCACGCTGATTACGAGACCCGCGTGCCGGAGACCCACAGATTGCTTCG
GTGCCAGACGACGGTATCCCTTTTCAGGCTCCAACTTGAAGTCTCCCTGC
TCAATATAGATCACCTTGTCTAGGGTGATCTTATGAGTTCCTTGCTGTGG
GTTTTGCGGGAAATCAGGCACTTCTAGCTGCACGGGCGCTGCATGAGGGA
AATTCTTTATGGTAACTTTGAGCGGTTCCAGGACAACCAACCGACGGGGA
GCTGTAACATTTAGCACATCCCGCACTGCTGCCTCCAACATGGCGGGGTC
GACGGCGATCTGGGCACCCGTTACGCCCATCTGGGCGCAGAAGTTGTTGA
TGGCCTCTGCTGGGAAGCCTCTACGTCTCAGAGCCGTCAGAGTAACAGCC
TGGGATCGTCCCAGTCGTGGACATCTGCTCCGTGATCAGCTTTGCAATCT
TGCGCTTTGACACAAGTGCGTAGTTCATGTTCAGCCTACCGTATTCCCAC
TGCACCGGGCAGTAGATACCCAAAGCGGTG
BS05447.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:04:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10506-PA | 2337 | Aats-gln-RA | 1559..2337 | 795..17 | 3895 | 100 | Minus |
| CG10506-PA | 2337 | Aats-gln-RA | 1425..1529 | 927..823 | 525 | 100 | Minus |
| CG10506-PA | 2337 | Aats-gln-RA | 1530..1559 | 823..794 | 150 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:21:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gln-RA | 2455 | CG10506-RA | 1472..2385 | 927..16 | 4520 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:21:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25263337..25264250 | 16..927 | 4470 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:21:36 has no hits.
BS05447.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:11:34 Download gff for
BS05447.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10506-PA | 1422..2337 | 17..930 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:40:10 Download gff for
BS05447.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10506-PA | 1422..2337 | 17..930 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:48:13 Download gff for
BS05447.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 1469..2394 | 9..930 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:56:02 Download gff for
BS05447.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 1469..2394 | 9..930 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:56:02 Download gff for
BS05447.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25263328..25264253 | 9..930 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:48:13 Download gff for
BS05447.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21089050..21089975 | 9..930 | 99 | | Plus |
BS05447.5prime Sequence
840 bp (804 high quality bases) assembled on 2005-12-02
> BS05447.5prime
GAAGTTATCAGTCGACATGGCTGGAGATGATCTGATTGCGAAATTCCAGG
CGCTCGGCATGAGCGAGCAAAAGGCGAAGGAAACTTTGAAGAATGCCAAC
GTGACAAAGAATCTCCAGCTGTCGCTGGCGGCGGCGGGAAGCGCCACCCT
ATCCGACGGCACTGGTATGCTGATCTACCACATGGCTACCAAGCTGAAGC
CGCAGACTGCGGACCATCTGCCTCTTCTGGTGCGCTACATAGTGGAGCAC
AAGCTGGACAACACTCAGCGCGTTGATGCCGCCCTGGAGTACCTGCTCAA
GTGCGGTCAGAGCCTGAATGCCAACATAGATCTGCAGGCGCTTGAGAAGG
AGTGCGGCGTTGGAGTGGTGGTCACTCCGGAGCAGATCGAGCGCACTGTG
CAGGCCAAGATCAAGGCCAGCTACAAGGAGGCCTTGTTGGAGCAACGCTA
CCATTTTAACTCTTTTAAAATCCTGCAAGATGTCCGGGGAGAACTCAAGT
GGGCGGATGCCAAGTCCGTGAAGGCGGCCATCGATGTGGAGATCTTCGAT
CTGTTGGGTCCCAAAACAGAAGCAGACTTGAAACCTCAGACAAAAGCAAA
CGATAAGCCGAAGGCTGCAAAACCGAAAGCTGAAGTAACTCCTGCCGCTC
AAACGGCTGAAGCTGCATCCGATGGAGCCACCACCATTTCGGAACTCATG
AAAACCAAGGTACACTTCCATGCTCCCGGAGAGAACTTCAAGGCAGATGG
CTACGTGGTCACCGAGCACACGGAGCGGCTACTAAAGGAGCACCTGGCGA
GAACTGGAGGCAAAGTGCACACACGATTTCCGCCAGAGCC
BS05447.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10506-PA | 2337 | Aats-gln-RA | 1..824 | 17..840 | 4120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 03:07:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gln-RA | 2455 | CG10506-RA | 48..871 | 17..840 | 4120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 03:07:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25264851..25265674 | 840..17 | 4120 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 03:07:26 has no hits.
BS05447.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:11:35 Download gff for
BS05447.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10506-PA | 1..824 | 17..840 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:40:11 Download gff for
BS05447.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10506-PA | 1..824 | 17..840 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 04:57:21 Download gff for
BS05447.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 39..871 | 7..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:41:48 Download gff for
BS05447.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 39..871 | 7..840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:41:48 Download gff for
BS05447.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25264851..25265683 | 7..840 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 04:57:21 Download gff for
BS05447.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21090573..21091405 | 7..840 | 99 | | Minus |
BS05447.pep Sequence
Translation from 16 to 2352
> BS05447.pep
MAGDDLIAKFQALGMSEQKAKETLKNANVTKNLQLSLAAAGSATLSDGTG
MLIYHMATKLKPQTADHLPLLVRYIVEHKLDNTQRVDAALEYLLKCGQSL
NANIDLQALEKECGVGVVVTPEQIERTVQAKIKASYKEALLEQRYHFNSF
KILQDVRGELKWADAKSVKAAIDVEIFDLLGPKTEADLKPQTKANDKPKA
AKPKAEVTPAAQTAEAASDGATTISELMKTKVHFHAPGENFKADGYVVTE
HTERLLKEHLARTGGKVHTRFPPEPNGILHIGHAKAININFGYAAAHDGV
CYLRYDDTNPEKEEEKFFLAIKEMVEWLGYKPFKITYSSDNFQQLYEWAV
VLINKGLAYVCHQKAEELKGFNPKPSPWRERPIEESLRLFEDMKRGKIDE
GAATLRMKVTLEEGKMDPVAYRIKFISHHRTGSDWCIYPTYDYTHCLCDS
LEDITHSLCTKEFQSRRSSYYWLCNALGIYCPVQWEYGRLNMNYALVSKR
KIAKLITEQIVHDWDDPRLFTLTALRRRGFPAEAINNFCAQMGVTGAQIA
VDPAMLEAAVRDVLNVTAPRRLVVLEPLKVTIKNFPHAAPVQLEVPDFPQ
NPQQGTHKITLDKVIYIEQGDFKLEPEKGYRRLAPKQSVGLRHAGLVISV
DEIVKDPATGQVVELICTSQPAEQAEKPKAFVQWVSQPIQLEVRLYEQLF
KHKNPEDPNEVPGGFLSDISEQSMSVVVAFADRALNQAKVYDKFQFERIG
FFSVDPDTSANHLVFNRTVGLKEDAGKK*
BS05447.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:51:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gln-PA | 778 | CG10506-PA | 1..778 | 1..778 | 4067 | 100 | Plus |
| Aats-glupro-PA | 1714 | CG5394-PA | 202..688 | 265..755 | 541 | 30.2 | Plus |
