Clone Sequence Records
BS05451.3prime Sequence
971 bp (803 high quality bases) assembled on 2005-12-02
> BS05451.3prime
ATGGTCTAGAAAGCTTCTAGACATTCGTGACACCCAGCTTGGCCAGATTG
CCCAGCGTGATGGCATCACCGGGCTGAAGTCTCAGGGCCGCCTTATAGCT
AGCTGCCGCGTGATTCGTGCGTCCCAGCAGATGCAGTATGGCCCCCAGAT
TAGTGTGAGCATGGGCATCGCCTGGTCGCAGGGCCACAGCCTTTCTGTAC
CACATTTCCGCATCCACTTTTCTGTCCAACAGTCGCATTGCGGTGGCGGC
GGCCACCACCAAAGTATAATCGTTGGGCGCCAGTTCCGCGGCTCTGCGAT
GGTAGATGGCGGACTCATGATGTCGCGACTGCAGCGAGAGGAATTCGGCA
TAATGATGATAGACACTGGCCTGCTCGGGCGCCAATTTCAATGCTCGCTT
GAACCACATCTCCGCCTCCGAGGCGCGGCTGCTATTTCTGGCCAGTGTGA
TGCCATAGGAGAGATGAGCAGCCACCTGGTTGGGCTGCAGCTCGAGGGCG
GCGCGATGGTGTCGCTCCGCCTCGTCCCACTGCTGAAGGCGACCGAGGAC
ATCGCCGATCCGCTGGTAGAGAATCTCACGCTGCTGCGGCAGTCCTGGCA
GCGATGACAGGGCCTCTCGGTAGATGGCCAGGGCCCGTTGAAGTTTTCCC
TGCTCCACGTAGAGGGCTCCCAACTGCAGGTAGGCCGAGCTGCGAGCCTG
ATCGTGAGCAGTTCGATCACGAACAGCAGCCCCATCCAAGTTGGAGCCCG
CCTGCAGAATTTCGATGGCCTGCTGGCGCTTGCCCAGCGCTATAAATGAT
ATGCCGAAGGTGAGGTACGCCACTGCCAGATTCGGTCGAAACTTGATGGC
GCGCTGAAAGCACTCGACAGCTGCGGGATAGACCTGCTGATTCTGGTGCA
GGATGCCCAGGTTAAAGTGCACATCCGCCATGTTTGGGCTGAACCGAATG
GCCTCCTGCAGGACCTGTTTG
BS05451.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:04:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4341-PA | 2817 | CG4341-RA | 1863..2817 | 971..17 | 4675 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:12:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4341-RC | 3801 | CG4341-RC | 2201..3155 | 971..17 | 4715 | 99.6 | Minus |
CG4341-RA | 4160 | CG4341-RA | 2560..3514 | 971..17 | 4715 | 99.6 | Minus |
CG31690-RE | 3248 | CG31690-RE | 2678..2852 | 489..315 | 185 | 74.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:11:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 956400..956792 | 826..434 | 1935 | 99.5 | Minus |
2L | 23513712 | 2L | 957277..957452 | 192..17 | 880 | 100 | Minus |
2L | 23513712 | 2L | 957051..957210 | 349..190 | 800 | 100 | Minus |
2L | 23513712 | 2L | 956249..956334 | 908..823 | 430 | 100 | Minus |
2L | 23513712 | 2L | 956860..956944 | 433..349 | 425 | 100 | Minus |
2L | 23513712 | 2L | 953448..953511 | 971..908 | 290 | 96.9 | Minus |
Blast to na_te.dros performed on 2015-02-10 19:11:59 has no hits.
BS05451.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:11:43 Download gff for
BS05451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4341-PA | 1863..2817 | 17..971 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:40:21 Download gff for
BS05451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4341-PA | 1863..2817 | 17..971 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:15:18 Download gff for
BS05451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4341-RA | 2560..3523 | 6..971 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:31:19 Download gff for
BS05451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4341-RA | 2560..3523 | 6..971 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:31:19 Download gff for
BS05451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 957052..957209 | 191..348 | 100 | -> | Minus |
2L | 957279..957461 | 6..190 | 97 | | Minus |
2L | 953448..953510 | 909..971 | 96 | -> | Minus |
2L | 956249..956334 | 823..908 | 100 | -> | Minus |
2L | 956404..956792 | 434..822 | 99 | -> | Minus |
2L | 956860..956944 | 349..433 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:15:18 Download gff for
BS05451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 953448..953510 | 909..971 | 96 | -> | Minus |
arm_2L | 956249..956334 | 823..908 | 100 | -> | Minus |
arm_2L | 956404..956792 | 434..822 | 99 | -> | Minus |
arm_2L | 956860..956944 | 349..433 | 100 | -> | Minus |
arm_2L | 957052..957209 | 191..348 | 100 | -> | Minus |
arm_2L | 957279..957461 | 6..190 | 97 | | Minus |
BS05451.5prime Sequence
868 bp (829 high quality bases) assembled on 2005-12-02
> BS05451.5prime
GAAGTTATCAGTCGACATGCCGTCACTGGAACCCTGGCTGTGGGGCGACT
CCTGTTCCTGGCTGGGGATGCTGGCGATGCTGCGGCTTCGGCTGCATAAA
TCAAACATGGACTTCACGTGCCTCTTCTGCTGCAGCCTGGCCTTCGTCTT
GTATCTGAACACTCTGGGCGCTGGCTTCGTCTACGACGACAGGCGAGCCA
TTCTGGCAAATGCGGATGTCTCGGGCGGAACTCCCTGGCAGCGGAGCTTC
TCGAACGACTTCTGGGGCACTCCGCTGACGGACAGCGGATCCCACGGCTC
CTGGCGACCGCTGTGCGTGCTCAGCTTCCGGCTGAACTACCTCATTGGCG
GGGGCTTTGCGCCCTGGGGCTTCCACCTGGTCAACAATCTGCTCCACTGC
GTCGCCACGGCTCTGGTGGTGCGGGTGGCGCGCACCCTCCTGGCCTCCGT
GTGGGCAGTCCTGGCCGCAGGCGCGCTCTTCGCCGCCCACCCGATCCACA
CGGAGGCGGTGGCCGGAGTGGTGGGACGGGCGGACCTCGCCGCCTGCGTC
TGCTACCTGCTCACGTACCTCAGCTACTTGCGGCACATGAGGTGGCGCGA
GTCCGGAGATCCGCGCCAGTGGCTGGCCCTTGGAGCCACTTTGATCCTGG
CTGCAGCCGGCCTACTCTGCAAGGAGACGGCTATTACGGCGCTTCTGGTC
TGTGCCCTCTTCGACGTGATGCGCGGTCTCAGCGGACAGGTGGACAAGCA
ACGTCTACGATCCGTGTGCATAGTTCTTGGAGCTCTGTTCTGCATGGCTT
ACTGCCGCCTAGTGATTGTCCCTGGACCGCAGACGGCCTTCTCCAGCGCG
GACAACCCGATCGCCAGG
BS05451.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:04:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4341-PA | 2817 | CG4341-RA | 1..852 | 17..868 | 4260 | 100 | Plus |
CG31690-PB | 2550 | CG31690-RB | 171..261 | 253..343 | 305 | 93.4 | Plus |
CG31690-PA | 2646 | CG31690-RA | 267..357 | 253..343 | 305 | 93.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:34:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4341-RA | 4160 | CG4341-RA | 698..1549 | 17..868 | 4260 | 100 | Plus |
CG4341-RC | 3801 | CG4341-RC | 428..1190 | 106..868 | 3815 | 100 | Plus |
CG31690-RE | 3248 | CG31690-RE | 780..1095 | 253..571 | 625 | 80.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:34:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 951584..952142 | 190..748 | 2795 | 100 | Plus |
2L | 23513712 | 2L | 952254..952375 | 747..868 | 610 | 100 | Plus |
2L | 23513712 | 2L | 2710559..2710874 | 253..571 | 555 | 79 | Plus |
2L | 23513712 | 2L | 930335..930423 | 17..105 | 445 | 100 | Plus |
2L | 23513712 | 2L | 950492..950579 | 106..193 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 07:34:58 has no hits.
BS05451.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:11:43 Download gff for
BS05451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4341-PA | 1..852 | 17..868 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:40:22 Download gff for
BS05451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4341-PA | 1..852 | 17..868 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:26:19 Download gff for
BS05451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4341-RA | 695..1549 | 14..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:21:56 Download gff for
BS05451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4341-RA | 695..1549 | 14..868 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:21:56 Download gff for
BS05451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 952256..952375 | 749..868 | 100 | | Plus |
2L | 930332..930423 | 14..105 | 98 | -> | Plus |
2L | 950492..950578 | 106..192 | 100 | -> | Plus |
2L | 951587..952142 | 193..748 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:26:19 Download gff for
BS05451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 950492..950578 | 106..192 | 100 | -> | Plus |
arm_2L | 930332..930423 | 14..105 | 98 | -> | Plus |
arm_2L | 951587..952142 | 193..748 | 100 | -> | Plus |
arm_2L | 952256..952375 | 749..868 | 100 | | Plus |
BS05451.complete Sequence
2849 bp assembled on 2008-08-14
GenBank Submission: FJ635120
> BS05451.complete
GAAGTTATCAGTCGACATGCCGTCACTGGAACCCTGGCTGTGGGGCGACT
CCTGTTCCTGGCTGGGGATGCTGGCGATGCTGCGGCTTCGGCTGCATAAA
TCAAACATGGACTTCACGTGCCTCTTCTGCTGCAGCCTGGCCTTCGTCTT
GTATCTGAACACTCTGGGCGCTGGCTTCGTCTACGACGACAGGCGAGCCA
TTCTGGCAAATGCGGATGTCTCGGGCGGAACTCCCTGGCAGCGGAGCTTC
TCGAACGACTTCTGGGGCACTCCGCTGACGGACAGCGGATCCCACGGCTC
CTGGCGACCGCTGTGCGTGCTCAGCTTCCGGCTGAACTACCTCATTGGCG
GGGGCTTTGCGCCCTGGGGCTTCCACCTGGTCAACAATCTGCTCCACTGC
GTCGCCACGGCTCTGGTGGTGCGGGTGGCGCGCACCCTCCTGGCCTCCGT
GTGGGCAGTCCTGGCCGCAGGCGCGCTCTTCGCCGCCCACCCGATCCACA
CGGAGGCGGTGGCCGGAGTGGTGGGACGGGCGGACCTCGCCGCCTGCGTC
TGCTACCTGCTCACGTACCTCAGCTACTTGCGGCACATGAGGTGGCGCGA
GTCCGGAGATCCGCGCCAGTGGCTGGCCCTTGGAGCCACTTTGATCCTGG
CTGCAGCCGGCCTACTCTGCAAGGAGACGGCTATTACGGCGCTTCTGGTC
TGTGCCCTCTTCGACGTGATGCGCGGTCTCAGCGGACAGGTGGACAAGCA
ACGTCTACGATCCGTGTGCATAGTTCTTGGAGCTCTGTTCTGCATGGCTT
ACTGCCGCCTAGTGATTGTCCCTGGACCGCAGACGGCCTTCTCCAGCGCG
GACAACCCGATCGCCAGGACTCCGTCCGCCTGGACGAGATTGCTGACCTT
CCTCTACCTGCCCGTCTTCAATCTGCGCCTGCTGCTCCAGCCAAACGTGC
TGAGCTTCGACTGGGGCATGGATGCCCTGCCCAGAGTCACTTCTTTGTGG
GATCGCCGCAATGCACAGTCCGCCTGCTTCTACTCTGTGCTGGTGGGCGT
CGCGTGGGGCAGCTGTAGACAACTGCTAAGCGGGTCAAAGGAGGTGACCC
ACTGTGGAGTGAGCTCAACCTTTCCGCAGTATCACATCCAGAAGGTGGCC
AGTCGCAAATCGCGCTCCAAGCGCAAGCGGTTGGCCAACAACACCAAGTA
CCAAGCCTTTGAGGCAGCCTATCATCAGCAACAGCAGGAAGCGCTTCCAT
GTCGCGATTGCAACAACAATAACAGCAGTGGCTACGTCTACGAGGGGAGT
TCCCCCGTTGCACAAGCCCCAGCCCAAGCCCCTCACCTTGTGTCTTCCGC
CTTTCGCGGCTCCCGCAGCAGCAGCAGTTGCAGCAACAGCACAAATAGCT
CCAGTTCCAGCTCCTCCAGTTCGAGTTCCAGCAGCAGCAGCAGCTCCAGC
CTGAGTGGCGGCTTCCAGTGCTCCTCCAAGGATTACGCGCTGGAGGGGAT
GTCGCCCGCCAATCGGCACGCTTGTGTGCTGATCATGTCGCTTAGCTTCC
TGGCATTGCCCTTTCTGCCTGCCAGTAACCTGCTGTTCTACGTGGGATTC
GTGGTGGCCGAACGACTTCTGTACCTGCCCAGCGTGGGATTCTGCCTGCT
GGTGGGCTACGGGGTCTCCAAGCTAATGTCCTGCAACCAGAGGACCCGCA
ATATCCTGCTTCTAAGCTTCAGTCTCCTCCTGGCCGCCATGAGTCTGCGA
ACGTTGCGGAGGAACGCCGATTGGCGGGACGAGGAGAGCCTCTACCGCAG
CGCCATTGCCATCAATCCGCCAAAGGCGTTGGGCAATCTGGGCAGCGTAC
TGAGCTCACAAGGGCGATACGAGGAGGCCAAACAGGTCCTGCAGGAGGCC
ATTCGGTTCAGGCCCAACATGGCGGATGTGCACTTTAACCTGGGCATCCT
GCACCAGAATCAGCAGGTCTATCCCGCAGCTGTCGAGTGCTTTCAGCGCG
CCATCAAGTTTCGACCGAATCTGGCAGTGGCGTACCTCAACCTCGGCATA
TCATTTATAGCGCTGGGCAAGCGCCAGCAGGCCATCGAAATTCTGCAGGC
GGGCTCCAACTTGGATGGGGCTGCTGTTCGTGATCGAACTGCTCACGATC
AGGCTCGCAGCTCGGCCTACCTGCAGTTGGGAGCCCTCTACGTGGAGCAG
GGAAAACTTCAACGGGCCCTGGCCATCTACCGAGAGGCCCTGTCATCGCT
GCCAGGACTGCCGCAGCAGCGTGAGATTCTCTACCAGCGGATCGGCGATG
TCCTCGGTCGCCTTCAGCAGTGGGACGAGGCGGAGCGACACCATCGCGCC
GCCCTCGAGCTGCAGCCCAACCAGGTGGCTGCTCATCTCTCCTATGGCAT
CACACTGGCCAGAAATAGCAGCCGCGCCTCGGAGGCGGAGATGTGGTTCA
AGCGAGCATTGAAATTGGCGCCCGAGCAGGCCAGTGTCTATCATCATTAT
GCCGAATTCCTCTCGCTGCAGTCGCGACATCATGAGTCCGCCATCTACCA
TCGCAGAGCCGCGGAACTGGCGCCCAACGATTATACTTTGGTGGTGGCCG
CCGCCACCGCAATGCGACTGTTGGACAGAAAAGTGGATGCGGAAATGTGG
TACAGAAAGGCTGTGGCCCTGCGACCAGGCGATGCCCATGCTCACACTAA
TCTGGGGGCCATACTGCATCTGCTGGGACGCACGAATCACGCGGCAGCTA
GCTATAAGGCGGCCCTGAGACTTCAGCCCGGTGATGCCATCACGCTGGGC
AATCTGGCCAAGCTGGGTGTCACGAATGTCTAGAAGCTTTCTAGACCAT
BS05451.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:48:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4341-RA | 2817 | CG4341-PA | 1..2817 | 17..2833 | 14085 | 100 | Plus |
CG4341-RC | 2727 | CG4341-PC | 1..2727 | 107..2833 | 13635 | 100 | Plus |
CG31690-RE | 2580 | CG31690-PE | 201..516 | 253..571 | 555 | 79 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:48:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4341-RA | 4160 | CG4341-RA | 698..3514 | 17..2833 | 14085 | 100 | Plus |
CG4341-RC | 3801 | CG4341-RC | 428..3155 | 106..2833 | 13640 | 100 | Plus |
CG31690-RE | 3248 | CG31690-RE | 780..1095 | 253..571 | 555 | 79 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:47:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 952254..953333 | 747..1826 | 5400 | 100 | Plus |
2L | 23513712 | 2L | 951584..952142 | 190..748 | 2795 | 100 | Plus |
2L | 23513712 | 2L | 956400..956792 | 2024..2416 | 1965 | 100 | Plus |
2L | 23513712 | 2L | 957277..957452 | 2658..2833 | 880 | 100 | Plus |
2L | 23513712 | 2L | 957051..957210 | 2501..2660 | 800 | 100 | Plus |
2L | 23513712 | 2L | 953395..953511 | 1826..1942 | 585 | 100 | Plus |
2L | 23513712 | 2L | 2710559..2710874 | 253..571 | 555 | 79 | Plus |
2L | 23513712 | 2L | 930335..930423 | 17..105 | 445 | 100 | Plus |
2L | 23513712 | 2L | 950492..950579 | 106..193 | 440 | 100 | Plus |
2L | 23513712 | 2L | 956249..956334 | 1942..2027 | 430 | 100 | Plus |
2L | 23513712 | 2L | 956860..956944 | 2417..2501 | 425 | 100 | Plus |
2L | 23513712 | 2L | 2711627..2711693 | 1546..1612 | 185 | 85.1 | Plus |
Blast to na_te.dros performed 2014-11-27 07:47:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6809 | 1362..1450 | 184 | 67.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..6884 | 1363..1450 | 179 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6851 | 1356..1450 | 160 | 63.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2447 | 1363..1467 | 158 | 62.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6742..6928 | 1260..1449 | 151 | 56.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6865 | 1363..1449 | 146 | 64.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1072..1163 | 1356..1450 | 144 | 63.2 | Plus |
BS05451.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:45:59 Download gff for
BS05451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4341-RA | 693..3521 | 14..2844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:26:34 Download gff for
BS05451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4341-RA | 698..3514 | 17..2833 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:59:18 Download gff for
BS05451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4341-RA | 696..3512 | 17..2833 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:04:53 Download gff for
BS05451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4341-RA | 698..3514 | 17..2833 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:04:53 Download gff for
BS05451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 930335..930423 | 17..105 | 100 | -> | Plus |
2L | 950492..950578 | 106..192 | 100 | -> | Plus |
2L | 957052..957209 | 2502..2659 | 100 | -> | Plus |
2L | 957279..957452 | 2660..2833 | 100 | | Plus |
2L | 951587..952142 | 193..748 | 100 | -> | Plus |
2L | 952256..953333 | 749..1826 | 100 | -> | Plus |
2L | 953396..953510 | 1827..1941 | 100 | -> | Plus |
2L | 956249..956334 | 1942..2027 | 100 | -> | Plus |
2L | 956404..956792 | 2028..2416 | 100 | -> | Plus |
2L | 956860..956944 | 2417..2501 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:26:34 Download gff for
BS05451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 957279..957452 | 2660..2833 | 100 | | Plus |
arm_2L | 956249..956334 | 1942..2027 | 100 | -> | Plus |
arm_2L | 956404..956792 | 2028..2416 | 100 | -> | Plus |
arm_2L | 956860..956944 | 2417..2501 | 100 | -> | Plus |
arm_2L | 957052..957209 | 2502..2659 | 100 | -> | Plus |
arm_2L | 930335..930423 | 17..105 | 100 | -> | Plus |
arm_2L | 950492..950578 | 106..192 | 100 | -> | Plus |
arm_2L | 951587..952142 | 193..748 | 100 | -> | Plus |
arm_2L | 952256..953333 | 749..1826 | 100 | -> | Plus |
arm_2L | 953396..953510 | 1827..1941 | 100 | -> | Plus |
BS05451.pep Sequence
Translation from 16 to 2832
> BS05451.pep
MPSLEPWLWGDSCSWLGMLAMLRLRLHKSNMDFTCLFCCSLAFVLYLNTL
GAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLC
VLSFRLNYLIGGGFAPWGFHLVNNLLHCVATALVVRVARTLLASVWAVLA
AGALFAAHPIHTEAVAGVVGRADLAACVCYLLTYLSYLRHMRWRESGDPR
QWLALGATLILAAAGLLCKETAITALLVCALFDVMRGLSGQVDKQRLRSV
CIVLGALFCMAYCRLVIVPGPQTAFSSADNPIARTPSAWTRLLTFLYLPV
FNLRLLLQPNVLSFDWGMDALPRVTSLWDRRNAQSACFYSVLVGVAWGSC
RQLLSGSKEVTHCGVSSTFPQYHIQKVASRKSRSKRKRLANNTKYQAFEA
AYHQQQQEALPCRDCNNNNSSGYVYEGSSPVAQAPAQAPHLVSSAFRGSR
SSSSCSNSTNSSSSSSSSSSSSSSSSSSLSGGFQCSSKDYALEGMSPANR
HACVLIMSLSFLALPFLPASNLLFYVGFVVAERLLYLPSVGFCLLVGYGV
SKLMSCNQRTRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYRSAIAIN
PPKALGNLGSVLSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGILHQNQQ
VYPAAVECFQRAIKFRPNLAVAYLNLGISFIALGKRQQAIEILQAGSNLD
GAAVRDRTAHDQARSSAYLQLGALYVEQGKLQRALAIYREALSSLPGLPQ
QREILYQRIGDVLGRLQQWDEAERHHRAALELQPNQVAAHLSYGITLARN
SSRASEAEMWFKRALKLAPEQASVYHHYAEFLSLQSRHHESAIYHRRAAE
LAPNDYTLVVAAATAMRLLDRKVDAEMWYRKAVALRPGDAHAHTNLGAIL
HLLGRTNHAAASYKAALRLQPGDAITLGNLAKLGVTNV*
BS05451.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:12:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4341-PA | 938 | CG4341-PA | 1..938 | 1..938 | 4846 | 100 | Plus |
CG4341-PC | 908 | CG4341-PC | 1..908 | 31..938 | 4675 | 100 | Plus |
CG31690-PE | 859 | CG31690-PE | 26..853 | 38..935 | 2010 | 50.2 | Plus |
CG4050-PB | 926 | CG4050-PB | 35..403 | 31..350 | 430 | 32.9 | Plus |
CG4050-PA | 926 | CG4050-PA | 35..403 | 31..350 | 430 | 32.9 | Plus |
CG4050-PB | 926 | CG4050-PB | 414..872 | 505..923 | 406 | 29.7 | Plus |