Clone Sequence Records
BS05464.complete Sequence
2096 bp assembled on 2009-12-07
GenBank Submission: KX795116
> BS05464.complete
GAAGTTATCAGTCGACATGGAATTATTTACTGTTAACAGATATACCGAGG
ATTTGAAAGAACAAAAAGATGGGGCCCAAGGCACCAACAACGAGGATGAA
ATACTGCAAAAATTGCTTAAGAAGGCTGCAAAACGCAAAAGGAAACATGA
AGCCATAGAAGTTGTAGAAACACCAATCCTGGAAAAAGAAACCTCAGATG
TGAAGGAGTCGGAATCCAAGGAGGAGCAGGTGGAAGAACCAGAAAAGCCC
CTAGAAGTTGTCCAAGAGGAAGATGTTCCGTCTAATGAGTTTCAAGTTCT
TGGAGGCGATGATTCGGCGGCCAAGAAGAAGAAAGTGCAGATGCAGCTGC
CCAATTGGCTGGCACATCCAACCATCATTGAAGGTGGAAGCCTGCAGCCG
GAGGAGGAAGTGCCCGCCTCCGAGGCAATTGACCAGCTCGATTACCTGGA
GAAGTACACATGTCAAGCTCTCAAGCAGATGAAGATTAAGCGGCTTTTTC
CAGTCCAAAAGCAGGTCATCCCATGGATCCTGGAGGCACACGCTAAGCCT
CCTCCCTTTCGTCCCCGAGATATTTGTGTATCTGCTCCTACAGGCAGTGG
AAAAACCTTGGCCTTTGCCATACCAATTGTCCAGTTGCTATCGCAGCGGG
TGGATTGTAAAGTAAGGGCTTTAGTCGTCCTTCCTGTGGCAGAGCTGGCC
CTACAGGTTTATCGGGTCATCAGTGAGTTGTGCAGCAAAACGGAGCTGGA
GGTTTGCCTTCTATCCAAGCAGCACAAACTAGAGGATGAGCAGGAGAAGC
TGGTGGAGCAATACAAAGGCAAATACTACTCCAAGGCAGACATTGTGGTG
ACCACACCAGGCCGCTTGGTTGACCATTTGCACGCCACGAAAGGGTTCTG
CCTGAAGAGCCTAAAATTTCTGGTCATTGACGAGGCCGATCGAATAATGG
ATGCAGTTTTCCAAAACTGGCTTTATCATCTGGACAGTCATGTAAAGGAA
ACCACCGACCAGCTGCTGGCCGGCACTCAAGCACCTCTATGCTATGCAGA
ACTTCAAGCCAGCTTTGGCAAGCAACCACATAAGCTCCTGTTCTCGGCGA
CATTGTCTCAAGATCCCGAGAAGCTGCAGGATCTACGACTCTTTCAGCCT
CGTCTGTTCGCCACCGTACTTACCATGCCCGTGTTGAAGGACGCAACGGA
AGAAGGTGCTGATACCGAAGCGCTTACAGATCCAGGACAATTTGTGGGCA
GATACACAACGCCGGCGGAGTTAACCGAGCAGTACTGTGTGACGGAGCTG
CGACTTAAACCCCTCACTGTTTTTGCCTTGGTGGAAAAGTACAAATGGAA
GCGATTCTTGTGCTTCACCAACAGTTCGGATCAGGCAACTCGACTAACAT
TCGTGCTGAAAGTGCTATTTCAAAAGTATAGCACCAAAGTGTCTGAATTG
TCGGGAAATCTCTCGGCTAAGGTTCGAAATGAACGACTAAGGGACTTTGC
TGCTGGGAAAATCAATGGACTGATCTGCTCAGATGCACTGGCGCGTGGTA
TCGATGTGGCAGACGTGGATGTTGTGCTCTCATATGAGACACCTCGCCAT
ATCACGACATACATTCATCGAGTGGGCCGAACGGCTCGAGCGGGAAGAAA
GGGCACCGCCGTCACCGTGCTCACGGAACAAGATATGACTTTATTCAAAA
AAATACTAAGCGATGCGAACAAGGGATTGGGTGAGGAAATCCACGTTTCT
CCAGATATTGAGATTCAACATGCAGTTGAATACAAAGAGGCTTTAGCCGG
CCTGCGCTCGGAAAAGGTGAAGAACAAGAACCAAAAGATGGCCGAGAAGA
ATCGTGTGGCCACCAAGGCATTGATCCACAAGAAACAGGAGGAAACGGCC
ACAGTTCGTCCACTGACGTTGATGGAAAAGTTGCAAATCAAAGCGAATGA
AATCGTGCAATCATCAAAGAAATCCTCCGAAACGAAAAATTCCAAGACCA
AGGCAGACAAAACAAAATACCAGCCAAAGGAAACCAAGAAGCAAATCATT
GCCAAACAACTTAAGGCCATCGAGAACTAAAAGCTTTCTAGACCAT
BS05464.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:11:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbp73D-RA | 2064 | CG9680-PA | 1..2064 | 17..2080 | 10320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:11:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbp73D-RA | 2209 | CG9680-RA | 85..2150 | 17..2082 | 10330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:11:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16728555..16729779 | 2082..858 | 6125 | 100 | Minus |
| 3L | 28110227 | 3L | 16729836..16730660 | 861..37 | 4125 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:11:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 670..767 | 1986..2082 | 118 | 59.2 | Plus |
BS05464.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:46:46 Download gff for
BS05464.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dbp73D-RA | 77..2138 | 17..2078 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:20 Download gff for
BS05464.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dbp73D-RA | 85..2146 | 17..2078 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:15:12 Download gff for
BS05464.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dbp73D-RA | 77..2138 | 17..2078 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:04 Download gff for
BS05464.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dbp73D-RA | 85..2146 | 17..2078 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:04 Download gff for
BS05464.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16728559..16729776 | 861..2078 | 100 | <- | Minus |
| 3L | 16729837..16730657 | 40..860 | 100 | <- | Minus |
| 3L | 16730712..16730734 | 17..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:20 Download gff for
BS05464.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16721659..16722876 | 861..2078 | 100 | <- | Minus |
| arm_3L | 16722937..16723757 | 40..860 | 100 | <- | Minus |
| arm_3L | 16723812..16723834 | 17..39 | 100 | | Minus |
BS05464.3prime Sequence
867 bp (762 high quality bases) assembled on 2005-12-02
> BS05464.3prime
ATGGTCTAGAAAGCTTTTAGTTCTCGATGGCCTTAAGTTGTTTGGCAATG
ATTTGCTTCTTGGTTTCCTTTGGCTGGTATTTTGTTTTGTCTGCCTTGGT
CTTGGAATTTTTCGTTTCGGAGGATTTCTTTGATGATTGCACGATTTCAT
TCGCTTTGATTTGCAACTTTTCCATCAACGTCAGTGGACGAACTGTGGCC
GTTTCCTCCTGTTTCTTGTGGATCAATGCCTTGGTGGCCACACGATTCTT
CTCGGCCATCTTTTGGTTCTTGTTCTTCACCTTTTCCGAGCGCAGGCCGG
CTAAAGCCTCTTTGTATTCAACTGCATGTTGAATCTCAATATCTGGAGAA
ACGTGGATTTCCTCACCCAATCCCTTGTTCGCATCGCTTAGTATTTTTTT
GAATAAAGTCATATCTTGTTCCGTGAGCACGGTGACGGCGGTGCCCTTTC
TTCCCGCTCGAGCCGTTCGGCCCACTCGATGAATGTATGTCGTGATATGG
CGAGGTGTCTCATATGAGAGCACAACATCCACGTCTGCCACATCGATACC
ACGCGCCAGTGCATCTGAGCAGATCAGTCCATTGATTTTCCCAGCAGCAA
AGTCCCTTAGTCGTTCATTTCGAACCTTAGCCGAGAGATTTCCCGACAAT
TCAGACACTTTGGTGCTATACTTTTGAAATAGCACTTTCAGCACGAATGT
TAGTCGAGTTGCCTGATCCGAACTGTTGGTGAAGCACAAGAATCGCTTCC
ATTTGTACTTTTCCACAAGGCAAAAACAGTGAGGGGTTTAAGTCGCAGCT
CCGTCACACAGTACTGCTCGGTTAACTCCGCCGGCGTTGTGTATCTGCCC
CACAATTGTCCTGGATC
BS05464.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:05:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9680-PA | 2064 | Dbp73D-RA | 1315..2064 | 766..17 | 3750 | 100 | Minus |
| CG9680-PA | 2064 | Dbp73D-RA | 1230..1314 | 850..766 | 425 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:18:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbp73D-RA | 2209 | CG9680-RA | 1297..2150 | 867..15 | 4200 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:17:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16728555..16729408 | 15..867 | 4175 | 99.5 | Plus |
Blast to na_te.dros performed 2015-02-10 22:18:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 670..767 | 111..15 | 118 | 59.2 | Minus |
BS05464.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:12:09 Download gff for
BS05464.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9680-PA | 1213..2064 | 17..867 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:40:57 Download gff for
BS05464.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9680-PA | 1213..2064 | 17..867 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:47:34 Download gff for
BS05464.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dbp73D-RA | 1297..2150 | 15..867 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:55:25 Download gff for
BS05464.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dbp73D-RA | 1297..2150 | 15..867 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:55:25 Download gff for
BS05464.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16728555..16729408 | 15..867 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:47:34 Download gff for
BS05464.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16721655..16722508 | 15..867 | 99 | | Plus |
BS05464.5prime Sequence
773 bp (734 high quality bases) assembled on 2005-12-02
> BS05464.5prime
GAAGTTATCAGTCGACATGGAATTATTTACTGTTAACAGATATACCGAGG
ATTTGAAAGAACAAAAAGATGGGGCCCAAGGCACCAACAACGAGGATGAA
ATACTGCAAAAATTGCTTAAGAAGGCTGCAAAACGCAAAAGGAAACATGA
AGCCATAGAAGTTGTAGAAACACCAATCCTGGAAAAAGAAACCTCAGATG
TGAAGGAGTCGGAATCCAAGGAGGAGCAGGTGGAAGAACCAGAAAAGCCC
CTAGAAGTTGTCCAAGAGGAAGATGTTCCGTCTAATGAGTTTCAAGTTCT
TGGAGGCGATGATTCGGCGGCCAAGAAGAAGAAAGTGCAGATGCAGCTGC
CCAATTGGCTGGCACATCCAACCATCATTGAAGGTGGAAGCCTGCAGCCG
GAGGAGGAAGTGCCCGCCTCCGAGGCAATTGACCAGCTCGATTACCTGGA
GAAGTACACATGTCAAGCTCTCAAGCAGATGAAGATTAAGCGGCTTTTTC
CAGTCCAAAAGCAGGTCATCCCATGGATCCTGGAGGCACACGCTAAGCCT
CCTCCCTTTCGTCCCCGAGATATTTGTGTATCTGCTCCTACAGGCAGTGG
AAAAACCTTGGCCTTTGCCATACCAATTGTCCAGTTGCTATCGCAGCGGG
TGGATTGTAAAGTAAGGGCTTTAGTCGTCCTTCCTGTGGCAGAGCTGGCC
CTACAGGTTTATCGGGTCATCAGTGAGTTGTGCAGCAAAACGGAGCTGGA
GGTTTGCCTTCTATCCAAGCAGC
BS05464.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:05:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9680-PA | 2064 | Dbp73D-RA | 1..757 | 17..773 | 3785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:40:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbp73D-RA | 2209 | CG9680-RA | 85..841 | 17..773 | 3785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:40:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16729924..16730660 | 773..37 | 3685 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 23:40:48 has no hits.
BS05464.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:12:10 Download gff for
BS05464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9680-PA | 1..757 | 17..773 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:40:58 Download gff for
BS05464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9680-PA | 1..757 | 17..773 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:32:51 Download gff for
BS05464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dbp73D-RA | 78..841 | 11..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:57:15 Download gff for
BS05464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dbp73D-RA | 78..841 | 11..773 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:57:15 Download gff for
BS05464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16729924..16730657 | 40..773 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:32:51 Download gff for
BS05464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16723024..16723757 | 40..773 | 100 | <- | Minus |
BS05464.pep Sequence
Translation from 16 to 2079
> BS05464.pep
MELFTVNRYTEDLKEQKDGAQGTNNEDEILQKLLKKAAKRKRKHEAIEVV
ETPILEKETSDVKESESKEEQVEEPEKPLEVVQEEDVPSNEFQVLGGDDS
AAKKKKVQMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQ
ALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAF
AIPIVQLLSQRVDCKVRALVVLPVAELALQVYRVISELCSKTELEVCLLS
KQHKLEDEQEKLVEQYKGKYYSKADIVVTTPGRLVDHLHATKGFCLKSLK
FLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLLAGTQAPLCYAELQASF
GKQPHKLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEGADT
EALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCF
TNSSDQATRLTFVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFAAGKIN
GLICSDALARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVT
VLTEQDMTLFKKILSDANKGLGEEIHVSPDIEIQHAVEYKEALAGLRSEK
VKNKNQKMAEKNRVATKALIHKKQEETATVRPLTLMEKLQIKANEIVQSS
KKSSETKNSKTKADKTKYQPKETKKQIIAKQLKAIEN*
BS05464.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:34:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbp73D-PA | 687 | CG9680-PA | 1..687 | 1..687 | 3482 | 100 | Plus |
| Dbp45A-PA | 521 | CG12759-PA | 14..482 | 144..671 | 359 | 26.2 | Plus |
| pit-PC | 680 | CG6375-PC | 59..558 | 25..573 | 346 | 25.3 | Plus |
| pit-PA | 680 | CG6375-PA | 59..558 | 25..573 | 346 | 25.3 | Plus |
| pit-PB | 680 | CG6375-PB | 59..558 | 25..573 | 346 | 25.3 | Plus |
