Clone Sequence Records
BS05552.3prime Sequence
842 bp (737 high quality bases) assembled on 2005-12-02
> BS05552.3prime
ATGGTCTAGAAAGCTTTTAGGCGACGGCGTCAGTGTCACACTCCTCCTCG
ACGGTGATGTACATACCCTCCTCCTCGTAGGCGGAATCGTGCTTGGCCAG
GATGCGCAGCAGGGGACGCAGGCGCAGCCACCACTGCTTCTTCGGGATGC
GTTGATCGAAGTTCGTCTCTGCAATGAGGTCGACCAGCGGTGAGAAGCGG
TACTGCCGCGACACGATTCCCAGCAGCGTGGCGGTGTCCGGGGACTTGCA
GTTGACTACGCCGTTGGCGTCGATGTTCGCCTTGATCTGGGCGGCCAGCC
AGTCGACACACTTGGCGGCCATTTTGGTGCCCATGTTGCGGTCGAAGGGA
GTGGGTGAGCCGCCCTGCTGCATGTGACCCAGGATGTTCATACGGCAGGT
GAAGAGGCCCTTGCCCTCCTCCGAGTACAGGCGGTAAATGAAGTCCGTGC
TGTAGTTCTCGCTAGCCTTCTCGTTTCGCAGGATTAGACCGCGGGAGACG
CCCTCGGCCATCTTGGAGGCCATGTGGTAGACATCCTGCTGCAGGTCTTT
GATGGAGAACTTCTCCTCGTAGATGTAGGCGGCATCAGCTCCGCCGGCCA
AGCCGGCCAAGGTGGCCAAATAGCCACAGTAGCCACCCATCGTCTCAATG
ACGAACACTCGGCGCTTGGTTCCCTGTGCCGACTGACGGATACGGTCGCA
AATCTCCGTAATCTCATTTAAACCGGTGTCGCATCCCAGAGAAAATTCTG
TGCCGGGCACATTGTTCGAAATCGTCGATGGAATAACACAATGGGGATGC
AGAACTGTGGGTAGTTGTCCCGCTGATCGGCGATCTGTCCGG
BS05552.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:07:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4001-PA | 2853 | Pfk-RA | 2083..2853 | 787..17 | 3855 | 100 | Minus |
| CG4001-PC | 2367 | Pfk-RC | 1597..2367 | 787..17 | 3855 | 100 | Minus |
| CG4001-PB | 2367 | Pfk-RB | 1597..2367 | 787..17 | 3855 | 100 | Minus |
| CG4001-PA | 2853 | Pfk-RA | 2027..2082 | 842..787 | 280 | 100 | Minus |
| CG4001-PC | 2367 | Pfk-RC | 1541..1596 | 842..787 | 280 | 100 | Minus |
| CG4001-PB | 2367 | Pfk-RB | 1541..1596 | 842..787 | 280 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:07:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pfk-RE | 3133 | CG4001-RE | 2045..2871 | 842..17 | 4110 | 99.9 | Minus |
| Pfk-RD | 3217 | CG4001-RD | 2129..2955 | 842..17 | 4110 | 99.9 | Minus |
| Pfk-RB | 3508 | CG4001-RB | 2100..2926 | 842..17 | 4110 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 13:06:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10115970..10116657 | 842..156 | 3390 | 99.9 | Minus |
| 2R | 25286936 | 2R | 10116737..10116875 | 155..17 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 13:06:57 has no hits.
BS05552.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:14:42 Download gff for
BS05552.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pfk-PA | 2027..2853 | 17..842 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:44:27 Download gff for
BS05552.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4001-PB | 1541..2367 | 17..842 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:49:38 Download gff for
BS05552.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pfk-RB | 2100..2928 | 13..842 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:56:52 Download gff for
BS05552.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pfk-RB | 2100..2928 | 13..842 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:56:52 Download gff for
BS05552.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10115970..10116657 | 156..842 | 99 | -> | Minus |
| 2R | 10116737..10116877 | 13..155 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:49:38 Download gff for
BS05552.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6004242..6004382 | 13..155 | 98 | | Minus |
| arm_2R | 6003475..6004162 | 156..842 | 99 | -> | Minus |
BS05552.5prime Sequence
812 bp (811 high quality bases) assembled on 2005-12-02
> BS05552.5prime
GAAGTTATCAGTCGACATGCATTCAATAAAATTTCGAGTATTTACCAAAT
TAAAACCTATATTTTTGGAAATCAATGGACGGATACCCATTTGCCGCCAT
TTTCATGGTCCTACAACATTTCGCTTAGAAATCTCAAACAAAACACCTCC
GATTAGGCAAAAGCTCACATTTCCAAACATCGGCATCCAATGCACACGAA
GTCATCATTTGTGTTGTCCTCGAGATATTTCAGGAAATACTCTTTTAAGT
GTAAAATTTAATTGCAAACGACATTGTATAAAGTTGCGCAGTGATTCTGG
TGATCAAAAGAATGATAGTCCTGGTGAAAAAAACATACAAAAAGACAAGT
CTGCGCAACGATGTGGAAAACCAATAAACAATCTGCACAACGGATTTCTT
AATGCTGTGAACTATTCTGAAAAGAATGCGGTGAAAAAGAAAAAGAGTGC
ACCAAAAAGGAAATGTGGCAAATCGGTGGATGAGCTGCGAAAGTGTTTAA
GAACCATGCAGGATGTTATTGATTTTGTACATCCAGTCAAGCCTTTTAAG
GACAAAGGACTGGCGGTCTTCACCAGCGGCGGGGATTCCCAGGGCATGAA
TGCCGCCGTGCGAGCCTGTGTCCGTATGGCCATCTATTTGGGCTGCAAGG
TCTACTTCATTCGTGAAGGCTACCAGGGCATGGTGGATGGTGGCGACTGC
ATCCAGGAAGCCAACTGGGCCTCAGTCTCATCCATTATCCATCGTGGTGG
CACCATCATTGGCTCCGCCCGTTGCCAGGACTTCCGTGAGCGTCAGGGTC
GCTTGAAAGCCG
BS05552.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:07:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4001-PA | 2853 | Pfk-RA | 1..796 | 17..812 | 3980 | 100 | Plus |
| CG4001-PC | 2367 | Pfk-RC | 46..310 | 548..812 | 1325 | 100 | Plus |
| CG4001-PB | 2367 | Pfk-RB | 46..310 | 548..812 | 1325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:48:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pfk-RD | 3217 | CG4001-RD | 102..898 | 16..812 | 3985 | 100 | Plus |
| Pfk-RA | 3217 | CG4001-RA | 102..898 | 16..812 | 3985 | 100 | Plus |
| Pfk-RE | 3133 | CG4001-RE | 102..651 | 16..547 | 2470 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:48:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10110232..10110547 | 232..547 | 1580 | 100 | Plus |
| 2R | 25286936 | 2R | 10112612..10112779 | 645..812 | 840 | 100 | Plus |
| 2R | 25286936 | 2R | 10111474..10111577 | 548..651 | 520 | 100 | Plus |
| 2R | 25286936 | 2R | 10109951..10110053 | 61..163 | 515 | 100 | Plus |
| 2R | 25286936 | 2R | 10110104..10110173 | 162..231 | 350 | 100 | Plus |
| 2R | 25286936 | 2R | 10109841..10109885 | 16..60 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 08:48:32 has no hits.
BS05552.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:14:43 Download gff for
BS05552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pfk-PA | 1..796 | 17..812 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:44:28 Download gff for
BS05552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4001-PA | 1..796 | 17..812 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:22:03 Download gff for
BS05552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pfk-RA | 102..898 | 16..812 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:27:32 Download gff for
BS05552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pfk-RA | 102..898 | 16..812 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:27:32 Download gff for
BS05552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10109836..10109885 | 11..60 | 94 | -> | Plus |
| 2R | 10109951..10110053 | 61..163 | 100 | -> | Plus |
| 2R | 10110106..10110173 | 164..231 | 100 | -> | Plus |
| 2R | 10110232..10110547 | 232..547 | 100 | -> | Plus |
| 2R | 10111474..10111575 | 548..649 | 100 | -> | Plus |
| 2R | 10112617..10112779 | 650..812 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:22:03 Download gff for
BS05552.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5997341..5997390 | 11..60 | 94 | -> | Plus |
| arm_2R | 5997456..5997558 | 61..163 | 100 | -> | Plus |
| arm_2R | 5997611..5997678 | 164..231 | 100 | -> | Plus |
| arm_2R | 5997737..5998052 | 232..547 | 100 | -> | Plus |
| arm_2R | 5998979..5999080 | 548..649 | 100 | -> | Plus |
| arm_2R | 6000122..6000284 | 650..812 | 100 | | Plus |
BS05552.complete Sequence
2885 bp assembled on 2010-05-10
GenBank Submission: KX797358
> BS05552.complete
GAAGTTATCAGTCGACATGCATTCAATAAAATTTCGAGTATTTACCAAAT
TAAAACCTATATTTTTGGAAATCAATGGACGGATACCCATTTGCCGCCAT
TTTCATGGTCCTACAACATTTCGCTTAGAAATCTCAAACAAAACACCTCC
GATTAGGCAAAAGCTCACATTTCCAAACATCGGCATCCAATGCACACGAA
GTCATCATTTGTGTTGTCCTCGAGATATTTCAGGAAATACTCTTTTAAGT
GTAAAATTTAATTGCAAACGACATTGTATAAAGTTGCGCAGTGATTCTGG
TGATCAAAAGAATGATAGTCCTGGTGAAAAAAACATACAAAAAGACAAGT
CTGCGCAACGATGTGGAAAACCAATAAACAATCTGCACAACGGATTTCTT
AATGCTGTGAACTATTCTGAAAAGAATGCGGTGAAAAAGAAAAAGAGTGC
ACCAAAAAGGAAATGTGGCAAATCGGTGGATGAGCTGCGAAAGTGTTTAA
GAACCATGCAGGATGTTATTGATTTTGTACATCCAGTCAAGCCTTTTAAG
GACAAAGGACTGGCGGTCTTCACCAGCGGCGGGGATTCCCAGGGCATGAA
TGCCGCCGTGCGAGCCTGTGTCCGTATGGCCATCTATTTGGGCTGCAAGG
TCTACTTCATTCGTGAAGGCTACCAGGGCATGGTGGATGGTGGCGACTGC
ATCCAGGAAGCCAACTGGGCCTCAGTCTCATCCATTATCCATCGTGGTGG
CACCATCATTGGCTCCGCCCGTTGCCAGGACTTCCGTGAGCGTCAGGGTC
GCTTGAAAGCCGCTAACAACCTGATTCAGCGAGGAATCACCAATCTGGTG
GTCATTGGAGGCGATGGCTCCCTCACGGGCGCCAATCTGTTCCGTCAGGA
GTGGTCCAGCCTGTTGGACGAGCTGGTCAAGAACAAGACCATTACCACCG
AGCAGCAGGAGAAGTTCAATGTCCTGCACATCGTTGGATTGGTTGGCTCC
ATCGACAACGATTTCTGTGGCACTGACATGACCATCGGCACGGACACGGC
ACTACATCGCATCATCGAGGCAATCGATGCCATCTCCAGTACAGCCTACT
CCCATCAGCGCACCTTCATCATGGAGGTCATGGGTCGTCATTGCGGCTAT
TTAGCTCTTGTGGGTGGACTGGCGTGCGAGGCGGATTTCATATTCATTCC
CGAAATGCCGCCCAAGGTCGATTGGCCAGACAGGCTCTGCTCTCAGCTGG
CCCAGGAGCGATCTGCTGGCCAGCGTCTGAACATCGTGATTGTGGCCGAG
GGAGCCATGGATCGCGAGGGTCATCCCATCACAGCCGAGGATGTAAAGAA
GGTGATCGACGAGCGTCTGAAGCACGATGCCCGCATCACTGTCTTGGGTC
ACGTGCAGCGCGGTGGCAATCCCAGTGCCTTCGATCGTATTTTGGCTTGC
CGCATGGGAGCTGAGGCCACTTTGGCCCTGATGGAGGCCACCAAGGACTC
GGTGCCAGTGGTCATCTCTCTGGACGGCAACCAGGCGGTTCGCGTGCCGC
TGATGGAGTGCGTAGAGCGCACCCAGGCTGTGGCCAAGGCCATGGCGGAG
AAACGCTGGGCGGATGCCGTCAAGCTGCGCGGACGCTCCTTCGAGCGGAA
TCTGGAGACCTACAAGATGCTGACGCGCTTGAAGCCGCCCAAGGAGAACT
TCGACGCCGATGGCAAGGGAATCGAAGGATACCGCCTAGCTGTGATGCAT
ATTGGTGCTCCGGCTTGCGGTATGAATGCCGCTGTGCGCAGCTTCGTGCG
CAATGCCATCTACCGCGGTGATGTGGTTTATGGAATCAACGACGGTGTCG
AGGGTCTGATTGCCGGAAATGTCCGCGAGCTGGGCTGGTCGGATGTCTCA
GGATGGGTTGGTCAGGGTGGCGCCTACTTGGGTACCAAACGCACACTGCC
TGAGGGCAAGTTCAAGGAGATCGCCGCTCGTCTCAAGGAGTTTAAGATCC
AGGGTCTCCTGATCATTGGTGGCTTTGAGAGTTACCATGCCGCCGGACAG
ATCGCCGATCAGCGGGACAACTACCCACAGTTCTGCATCCCCATTGTGGT
TATTCCATCGACGATTTCGAACAATGTGCCCGGCACAGAATTTTCTCTGG
GATGCGACACCGGTTTAAATGAGATTACGGAGATTTGCGACCGTATCCGT
CAGTCGGCACAGGGAACCAAGCGCCGAGTGTTCGTCATTGAGACGATGGG
TGGCTACTGTGGCTATTTGGCCACCTTGGCCGGCTTGGCCGGCGGAGCTG
ATGCCGCCTACATCTACGAGGAGAAGTTCTCCATCAAAGACCTGCAGCAG
GATGTCTACCACATGGCCTCCAAGATGGCCGAGGGCGTCTCCCGCGGTCT
AATCCTGCGAAACGAGAAGGCTAGCGAGAACTACAGCACGGACTTCATTT
ACCGCCTGTACTCGGAGGAGGGCAAGGGCCTCTTCACCTGCCGTATGAAC
ATCCTGGGTCACATGCAGCAGGGCGGCTCACCCACTCCCTTCGACCGCAA
CATGGGCACCAAAATGGCCGCCAAGTGTGTCGACTGGCTGGCCGCCCAGA
TCAAGGCGAACATCGACGCCAACGGCGTAGTCAACTGCAAGTCCCCGGAC
ACCGCCACGCTGCTGGGAATCGTGTCGCGGCAGTACCGCTTCTCACCGCT
GGTCGACCTCATTGCAGAGACGAACTTCGATCAACGCATCCCGAAGAAGC
AGTGGTGGCTGCGCCTGCGTCCCCTGCTGCGCATCCTGGCCAAGCACGAT
TCCGCCTACGAGGAGGAGGGTATGTACATCACCGTCGAGGAGGAGTGTGA
CACTGACGCCGTCGCCTAAAAGCTTTCTAGACCAT
BS05552.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:56:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pfk-RA | 2853 | CG4001-PA | 1..2853 | 17..2869 | 14265 | 100 | Plus |
| Pfk-RD | 2853 | CG4001-PD | 1..2853 | 17..2869 | 13590 | 98.4 | Plus |
| Pfk-RB | 2367 | CG4001-PB | 46..2367 | 548..2869 | 11610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:56:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pfk-RA | 3217 | CG4001-RA | 102..2955 | 16..2869 | 14270 | 100 | Plus |
| Pfk-RD | 3217 | CG4001-RD | 102..2955 | 16..2869 | 13595 | 98.4 | Plus |
| Pfk-RB | 3508 | CG4001-RB | 605..2926 | 548..2869 | 11610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:56:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10115814..10116657 | 1887..2730 | 4220 | 100 | Plus |
| 2R | 25286936 | 2R | 10115314..10115759 | 1444..1889 | 2230 | 100 | Plus |
| 2R | 25286936 | 2R | 10112612..10112960 | 645..993 | 1745 | 100 | Plus |
| 2R | 25286936 | 2R | 10110232..10110547 | 232..547 | 1580 | 100 | Plus |
| 2R | 25286936 | 2R | 10114914..10115106 | 1253..1445 | 965 | 100 | Plus |
| 2R | 25286936 | 2R | 10113015..10113170 | 991..1146 | 780 | 100 | Plus |
| 2R | 25286936 | 2R | 10116737..10116875 | 2731..2869 | 695 | 100 | Plus |
| 2R | 25286936 | 2R | 10113537..10113652 | 1141..1256 | 565 | 99.1 | Plus |
| 2R | 25286936 | 2R | 10111474..10111577 | 548..651 | 520 | 100 | Plus |
| 2R | 25286936 | 2R | 10109951..10110053 | 61..163 | 515 | 100 | Plus |
| 2R | 25286936 | 2R | 10110104..10110173 | 162..231 | 350 | 100 | Plus |
| 2R | 25286936 | 2R | 10109841..10109885 | 16..60 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:56:48 has no hits.
BS05552.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-10 11:55:45 Download gff for
BS05552.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pfk-RA | 103..2953 | 17..2867 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:06:30 Download gff for
BS05552.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pfk-RA | 103..2953 | 17..2867 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:00 Download gff for
BS05552.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pfk-RA | 103..2953 | 17..2867 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:00 Download gff for
BS05552.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10114917..10115105 | 1256..1444 | 100 | -> | Plus |
| 2R | 10112617..10112958 | 650..991 | 100 | -> | Plus |
| 2R | 10110232..10110547 | 232..547 | 100 | -> | Plus |
| 2R | 10111474..10111575 | 548..649 | 100 | -> | Plus |
| 2R | 10113016..10113170 | 992..1146 | 100 | -> | Plus |
| 2R | 10113543..10113651 | 1147..1255 | 100 | -> | Plus |
| 2R | 10109842..10109885 | 17..60 | 100 | -> | Plus |
| 2R | 10109951..10110053 | 61..163 | 100 | -> | Plus |
| 2R | 10110106..10110173 | 164..231 | 100 | -> | Plus |
| 2R | 10115315..10115757 | 1445..1887 | 100 | -> | Plus |
| 2R | 10115815..10116657 | 1888..2730 | 100 | -> | Plus |
| 2R | 10116737..10116873 | 2731..2867 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:06:30 Download gff for
BS05552.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5997456..5997558 | 61..163 | 100 | -> | Plus |
| arm_2R | 5997611..5997678 | 164..231 | 100 | -> | Plus |
| arm_2R | 5997347..5997390 | 17..60 | 100 | -> | Plus |
| arm_2R | 5997737..5998052 | 232..547 | 100 | -> | Plus |
| arm_2R | 5998979..5999080 | 548..649 | 100 | -> | Plus |
| arm_2R | 6000122..6000463 | 650..991 | 100 | -> | Plus |
| arm_2R | 6000521..6000675 | 992..1146 | 100 | -> | Plus |
| arm_2R | 6001048..6001156 | 1147..1255 | 100 | -> | Plus |
| arm_2R | 6002422..6002610 | 1256..1444 | 100 | -> | Plus |
| arm_2R | 6002820..6003262 | 1445..1887 | 100 | -> | Plus |
| arm_2R | 6003320..6004162 | 1888..2730 | 100 | -> | Plus |
| arm_2R | 6004242..6004378 | 2731..2867 | 100 | | Plus |
BS05552.pep Sequence
Translation from 16 to 2868
> BS05552.pep
MHSIKFRVFTKLKPIFLEINGRIPICRHFHGPTTFRLEISNKTPPIRQKL
TFPNIGIQCTRSHHLCCPRDISGNTLLSVKFNCKRHCIKLRSDSGDQKND
SPGEKNIQKDKSAQRCGKPINNLHNGFLNAVNYSEKNAVKKKKSAPKRKC
GKSVDELRKCLRTMQDVIDFVHPVKPFKDKGLAVFTSGGDSQGMNAAVRA
CVRMAIYLGCKVYFIREGYQGMVDGGDCIQEANWASVSSIIHRGGTIIGS
ARCQDFRERQGRLKAANNLIQRGITNLVVIGGDGSLTGANLFRQEWSSLL
DELVKNKTITTEQQEKFNVLHIVGLVGSIDNDFCGTDMTIGTDTALHRII
EAIDAISSTAYSHQRTFIMEVMGRHCGYLALVGGLACEADFIFIPEMPPK
VDWPDRLCSQLAQERSAGQRLNIVIVAEGAMDREGHPITAEDVKKVIDER
LKHDARITVLGHVQRGGNPSAFDRILACRMGAEATLALMEATKDSVPVVI
SLDGNQAVRVPLMECVERTQAVAKAMAEKRWADAVKLRGRSFERNLETYK
MLTRLKPPKENFDADGKGIEGYRLAVMHIGAPACGMNAAVRSFVRNAIYR
GDVVYGINDGVEGLIAGNVRELGWSDVSGWVGQGGAYLGTKRTLPEGKFK
EIAARLKEFKIQGLLIIGGFESYHAAGQIADQRDNYPQFCIPIVVIPSTI
SNNVPGTEFSLGCDTGLNEITEICDRIRQSAQGTKRRVFVIETMGGYCGY
LATLAGLAGGADAAYIYEEKFSIKDLQQDVYHMASKMAEGVSRGLILRNE
KASENYSTDFIYRLYSEEGKGLFTCRMNILGHMQQGGSPTPFDRNMGTKM
AAKCVDWLAAQIKANIDANGVVNCKSPDTATLLGIVSRQYRFSPLVDLIA
ETNFDQRIPKKQWWLRLRPLLRILAKHDSAYEEEGMYITVEEECDTDAVA
*
BS05552.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:18:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pfk-PA | 950 | CG4001-PA | 1..950 | 1..950 | 4982 | 100 | Plus |
| Pfk-PD | 950 | CG4001-PD | 1..950 | 1..950 | 4908 | 98.3 | Plus |
| Pfk-PE | 922 | CG4001-PE | 1..922 | 1..950 | 4670 | 94.1 | Plus |
| Pfk-PB | 788 | CG4001-PB | 16..788 | 178..950 | 4021 | 100 | Plus |
| Pfk-PC | 788 | CG4001-PC | 16..788 | 178..950 | 3929 | 97.8 | Plus |
