Clone Sequence Records
BS05611.3prime Sequence
711 bp (710 high quality bases) assembled on 2005-12-02
> BS05611.3prime
ATGGTCTAGAAAGCTTCTACTGGCTCTTCGCTTTGTTCTCGGCCATGCAG
CTCAGGATGCGGGTCTGCAGAGCCCGTGCACCCTTGAGGTTGATCTCCTC
GTTGTCGGGCAACAACTTATCCATGCGTTCCATCCATTGCTTAGTCTGCG
GGTACTTTTCCCGTTCCACTGGTATGAGCAGATCCAAGGTCACCAGAGTG
GTGTGGATGGACACGTCGGCAACGCTCAGTTCGTTGCCCACCACGAAACT
TCCTTGCTGCAGAAAGTGTTCCAAGTCGGAGTACGCATTGTGGCAGAGGG
TCAGCGATCGGGGGTTGTATTCTCCCTCGCCACCGTAAATGTTCCGAGCC
ACAATGTCCTTTACCACCTGAAATAGCACTCCGTTCTCGTAGTGCATGCG
ATGGTCGATGTGGGCTCTCCTTTTCAAATCCCGCGGATAGAGTTGGTCAT
TCCCGGCGTACTTGGCTACCAGGAAGCACACGATGGCGTGACTGTCCACG
TAGACCTCGCCATCGCTGTCCACAAACACCGGGATCTGGTGCTGGGGGTT
TAGCTTGACAAATTCCTCGCTCAGGTGTTCCTTCTTGGCGAAGTCAACGG
GTTTGAGCTCCAGGTCCAGTCCAATAAGTTTGGCCACCAGGATGCATGCC
CTGGCAGGAGGACTAAAAAGGGCGTAGTACAGCGTTGGCTTCGACATGTC
GACTGATAACT
BS05611.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11784-PA | 681 | CG11784-RA | 1..681 | 697..17 | 3405 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:18:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE13-RB | 1061 | CG11784-RB | 230..911 | 697..16 | 3410 | 100 | Minus |
GstE13-RA | 862 | CG11784-RA | 31..712 | 697..16 | 3410 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:18:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9122620..9123159 | 555..16 | 2700 | 100 | Minus |
2R | 25286936 | 2R | 9122354..9122448 | 697..603 | 475 | 100 | Minus |
2R | 25286936 | 2R | 9122519..9122567 | 602..554 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:18:51 has no hits.
BS05611.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:16:32 Download gff for
BS05611.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11784-PA | 1..681 | 17..697 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:46:57 Download gff for
BS05611.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11784-PA | 1..681 | 17..697 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:39:32 Download gff for
BS05611.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE13-RA | 23..720 | 8..706 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:40:35 Download gff for
BS05611.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE13-RA | 23..720 | 8..706 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:40:35 Download gff for
BS05611.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9122346..9122448 | 603..706 | 96 | -> | Minus |
2R | 9122519..9122567 | 554..602 | 100 | -> | Minus |
2R | 9122622..9123167 | 8..553 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:39:32 Download gff for
BS05611.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5009851..5009953 | 603..706 | 96 | -> | Minus |
arm_2R | 5010024..5010072 | 554..602 | 100 | -> | Minus |
arm_2R | 5010127..5010672 | 8..553 | 99 | | Minus |
BS05611.5prime Sequence
711 bp (710 high quality bases) assembled on 2005-11-29
> BS05611.5prime
GAAGTTATCAGTCGACATGTCGAAGCCAACGCTGTACTACGCCCTTTTTA
GTCCTCCTGCCAGGGCATGCATCCTGGTGGCCAAACTTATTGGACTGGAC
CTGGAGCTCAAACCCGTTGACTTCGCCAAGAAGGAACACCTGAGCGAGGA
ATTTGTCAAGCTAAACCCCCAGCACCAGATCCCGGTGTTTGTGGACAGCG
ATGGCGAGGTCTACGTGGACAGTCACGCCATCGTGTGCTTCCTGGTAGCC
AAGTACGCCGGGAATGACCAACTCTATCCGCGGGATTTGAAAAGGAGAGC
CCACATCGACCATCGCATGCACTACGAGAACGGAGTGCTATTTCAGGTGG
TAAAGGACATTGTGGCTCGGAACATTTACGGTGGCGAGGGAGAATACAAC
CCCCGATCGCTGACCCTCTGCCACAATGCGTACTCCGACTTGGAACACTT
TCTGCAGCAAGGAAGTTTCGTGGTGGGCAACGAACTGAGCGTTGCCGACG
TGTCCATCCACACCACTCTGGTGACCTTGGATCTGCTCATACCAGTGGAA
CGGGAAAAGTACCCGCAGACTAAGCAATGGATGGAACGCATGGATAAGTT
GTTGCCCGACAACGAGGAGATCAACCTCAAGGGTGCACGGGCTCTGCAGA
CCCGCATCCTGAGCTGCATGGCCGAGAACAAAGCGAAGAGCCAGTAGAAG
CTTTCTAGACC
BS05611.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11784-PA | 681 | CG11784-RA | 1..681 | 17..697 | 3405 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:05:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE13-RB | 1061 | CG11784-RB | 230..911 | 17..698 | 3410 | 100 | Plus |
GstE13-RA | 862 | CG11784-RA | 31..712 | 17..698 | 3410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:05:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9122620..9123159 | 159..698 | 2700 | 100 | Plus |
2R | 25286936 | 2R | 9122354..9122448 | 17..111 | 475 | 100 | Plus |
2R | 25286936 | 2R | 9122519..9122567 | 112..160 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 20:05:43 has no hits.
BS05611.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:16:33 Download gff for
BS05611.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11784-PA | 1..681 | 17..697 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:46:59 Download gff for
BS05611.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11784-PA | 1..681 | 17..697 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:24:20 Download gff for
BS05611.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE13-RA | 23..720 | 8..706 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:41:25 Download gff for
BS05611.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE13-RA | 23..720 | 8..706 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:41:25 Download gff for
BS05611.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9122346..9122448 | 8..111 | 96 | -> | Plus |
2R | 9122519..9122567 | 112..160 | 100 | -> | Plus |
2R | 9122622..9123167 | 161..706 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:24:20 Download gff for
BS05611.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5009851..5009953 | 8..111 | 96 | -> | Plus |
arm_2R | 5010024..5010072 | 112..160 | 100 | -> | Plus |
arm_2R | 5010127..5010672 | 161..706 | 99 | | Plus |
BS05611.complete Sequence
713 bp (713 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ635162
> BS05611.complete
GAAGTTATCAGTCGACATGTCGAAGCCAACGCTGTACTACGCCCTTTTTA
GTCCTCCTGCCAGGGCATGCATCCTGGTGGCCAAACTTATTGGACTGGAC
CTGGAGCTCAAACCCGTTGACTTCGCCAAGAAGGAACACCTGAGCGAGGA
ATTTGTCAAGCTAAACCCCCAGCACCAGATCCCGGTGTTTGTGGACAGCG
ATGGCGAGGTCTACGTGGACAGTCACGCCATCGTGTGCTTCCTGGTAGCC
AAGTACGCCGGGAATGACCAACTCTATCCGCGGGATTTGAAAAGGAGAGC
CCACATCGACCATCGCATGCACTACGAGAACGGAGTGCTATTTCAGGTGG
TAAAGGACATTGTGGCTCGGAACATTTACGGTGGCGAGGGAGAATACAAC
CCCCGATCGCTGACCCTCTGCCACAATGCGTACTCCGACTTGGAACACTT
TCTGCAGCAAGGAAGTTTCGTGGTGGGCAACGAACTGAGCGTTGCCGACG
TGTCCATCCACACCACTCTGGTGACCTTGGATCTGCTCATACCAGTGGAA
CGGGAAAAGTACCCGCAGACTAAGCAATGGATGGAACGCATGGATAAGTT
GTTGCCCGACAACGAGGAGATCAACCTCAAGGGTGCACGGGCTCTGCAGA
CCCGCATCCTGAGCTGCATGGCCGAGAACAAAGCGAAGAGCCAGTAGAAG
CTTTCTAGACCAT
BS05611.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:30:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE13-RB | 681 | CG11784-PB | 1..681 | 17..697 | 3405 | 100 | Plus |
GstE13-RA | 681 | CG11784-PA | 1..681 | 17..697 | 3405 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:30:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE13-RB | 1061 | CG11784-RB | 230..911 | 17..698 | 3410 | 100 | Plus |
GstE13-RA | 862 | CG11784-RA | 31..712 | 17..698 | 3410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:30:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9122620..9123159 | 159..698 | 2700 | 100 | Plus |
2R | 25286936 | 2R | 9122354..9122448 | 17..111 | 475 | 100 | Plus |
2R | 25286936 | 2R | 9122519..9122567 | 112..160 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:30:14 has no hits.
BS05611.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:44:40 Download gff for
BS05611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11784-RA | 1..681 | 17..697 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:31:54 Download gff for
BS05611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11784-RA | 54..751 | 8..706 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:02:33 Download gff for
BS05611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE13-RA | 31..711 | 17..697 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:44:40 Download gff for
BS05611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11784-RA | 54..751 | 8..706 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:42 Download gff for
BS05611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE13-RA | 31..711 | 17..697 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:42 Download gff for
BS05611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9122354..9122448 | 17..111 | 100 | -> | Plus |
2R | 9122519..9122567 | 112..160 | 100 | -> | Plus |
2R | 9122622..9123158 | 161..697 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:02:33 Download gff for
BS05611.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5009859..5009953 | 17..111 | 100 | -> | Plus |
arm_2R | 5010024..5010072 | 112..160 | 100 | -> | Plus |
arm_2R | 5010127..5010663 | 161..697 | 100 | | Plus |
BS05611.pep Sequence
Translation from 16 to 696
> BS05611.pep
MSKPTLYYALFSPPARACILVAKLIGLDLELKPVDFAKKEHLSEEFVKLN
PQHQIPVFVDSDGEVYVDSHAIVCFLVAKYAGNDQLYPRDLKRRAHIDHR
MHYENGVLFQVVKDIVARNIYGGEGEYNPRSLTLCHNAYSDLEHFLQQGS
FVVGNELSVADVSIHTTLVTLDLLIPVEREKYPQTKQWMERMDKLLPDNE
EINLKGARALQTRILSCMAENKAKSQ*
BS05611.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:00:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE13-PB | 226 | CG11784-PB | 1..226 | 1..226 | 1178 | 100 | Plus |
GstE13-PA | 226 | CG11784-PA | 1..226 | 1..226 | 1178 | 100 | Plus |
GstE12-PC | 223 | CG16936-PC | 1..223 | 1..224 | 436 | 39.1 | Plus |
GstE12-PB | 223 | CG16936-PB | 1..223 | 1..224 | 436 | 39.1 | Plus |
GstE12-PD | 223 | CG16936-PD | 1..223 | 1..224 | 436 | 39.1 | Plus |