Clone Sequence Records
BS05614.3prime Sequence
920 bp (788 high quality bases) assembled on 2005-12-02
> BS05614.3prime
ATGGTCTAGAAAGCTTTTAGAGCTTCATCACATCCCAAGGATCGTCCATA
TAGTGCAGGATGGCTTTGTCGTGCAGTCTTTCGCCAAAAACCTCCTTAAG
CAGGCGTAGAACGCATTCCTCAATGAATGCCACCTGATCCTGGGGGCAGT
AGTCATCTTGAGCGGAATGGGCCATTGTAATGGCCACTGGAGGAACTGGC
AGGCGCTGTAAGAAACGCTTGAAGTTTGCAAAGTACGTTTCCAACTCTTC
GGCGATGCTGATGTGGTGGGGCAAGCCATTATTATCGGTGGTGCTGCCCG
AATCGAAGATCAAATGCCAGTCGATTTCATCGTCTGGATATTTCTCCTGC
AGCTGATCGGCCAGTTTCACAATCTTGGCGTACACTTCGGGCGTGACCAC
GGTCTCGTCCGGCTTTTCCAGTCCCTCGAAATTGCGCTCCTCCTCCAGAT
GCCAGAAAATCGTCTTCAGTGCATCCAACTGAGTCTGTCGCCTCTCTGCC
GTGGCCAAATAATCTGCTATAGTAGCCGTGCCCGACTTCTTCACCTTCTC
CACGCTTTCGAAGTGGAAGATCTCCTTTAGCTGATTGTAGCAATCGGCAT
CCTTGTATATTTCCAAGAAGGGGTTGGAGGTGCTGAAAAAGTCGAGGTCT
ATGTCCAGCACGAATCCCTTGGCGTCCTTCTCCGTTAGGAATTCGTTCGG
ATTGAGGCTTTCGTTGTCTGCATCGTGAACCTGCAGCTCCACGCTCTTGG
CATCCTGCAGATCCTCCGTAGTGCAGTAGTTGCCGTCGGCAATAAAGTAG
TCCAACGGACAGTCCACTCCAATGCGATCGTCTTTTTGTCAACCTTAAAG
TCGTGGCTGCCAGTGGGCAGCTGCTGGCACCATGAGTTCTTCAGCCACAC
GACGCGGTTGAAATGTCCTG
BS05614.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6818-PA | 1413 | MESR6-RA | 590..1413 | 840..17 | 4095 | 99.8 | Minus |
| CG6818-PA | 1413 | MESR6-RA | 509..589 | 920..840 | 380 | 98.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:04:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MESR6-RA | 1749 | CG6818-RA | 649..1553 | 920..17 | 4470 | 99.7 | Minus |
| MESR6-RB | 1791 | CG6818-RB | 693..1595 | 918..17 | 4460 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:04:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19093661..19094564 | 919..17 | 4440 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:04:16 has no hits.
BS05614.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:16:38 Download gff for
BS05614.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR6-PA | 509..1413 | 17..920 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:47:06 Download gff for
BS05614.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6818-PA | 509..1413 | 17..920 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:11:19 Download gff for
BS05614.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR6-RA | 649..1562 | 5..920 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:45:46 Download gff for
BS05614.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR6-RA | 649..1562 | 5..920 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:45:46 Download gff for
BS05614.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19093660..19094573 | 5..920 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:11:19 Download gff for
BS05614.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19086760..19087673 | 5..920 | 99 | | Minus |
BS05614.5prime Sequence
834 bp (727 high quality bases) assembled on 2005-11-29
> BS05614.5prime
GAAGTTATCAGTCGACATGGAATCGGATACGCTGGACCAGGAGAGTGCCG
CGGCTGCTCTAAAAAAACTATCGCCAAGTGAAAGTCCCGAAAGTTCGAAG
AAATGGGAGCCGACTTCGGGAGAGTGGGTTGCGGCGGGTGGGGGAGAAGA
GGCGCCGCCAACAAAGAGACAAAAGACTGCAGACGAAAAGGAGGAGAATC
GGGAGGAAGACGAGGATAGCGAGGAGAGCGTTGATGAGGAGGAGGATGAT
GGCGAGGGCATCGTCCAGATTGGCGGCACCATCAGCCCAAGGCATTTCCA
GCGCATCCCCGTCTTTATCGTCGACTACCACAACGATGTGCTGGAGTTCA
TCTACCGCTGCTTTGCCACCCGCCACCTTCCGCTGCAGAACAACACCCTT
GTCCACTTCGACTCGCATCCGGATCTGGTCATTCCACGGCACATTGCCGC
CAGTTCCACCTACCAAAAGGAAACCATGTTAAATGAGCTTAGCATCGAGA
ACTGGATCATGCCCACACTTTATGCAGGACATTTCAACCGCGTCGTGTGG
CTGAAGAACTCATGGTGCCAGCAGCTGCCCACTGGCAGGCACGACTTTAA
GGTTGGACAAAAGGACGATCGCATTGGAGTGGACTGTCCGTTGGACTACT
TTATTGCCGACGGCAACTACTGCACTACGGAGGATCTGCAGGATGCCAAG
AGCGTGGAGCTGCAGGTTCACGATGCAGACAACGAAAGCCTCAATCCGAA
CGAATTCCTAACGGAGAAGGACGCCNAGGGATTCGTGCTGGACATAGACC
TCGACTTTTTCAGCACCTCAACCCCTTCTTGGAA
BS05614.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6818-PA | 1413 | MESR6-RA | 1..803 | 17..819 | 3996 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:14:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MESR6-RA | 1749 | CG6818-RA | 141..959 | 17..834 | 4059 | 99.8 | Plus |
| MESR6-RB | 1791 | CG6818-RB | 141..651 | 17..527 | 2555 | 100 | Plus |
| MESR6-RB | 1791 | CG6818-RB | 693..1001 | 527..834 | 1509 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:13:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19092810..19093321 | 17..528 | 2560 | 100 | Plus |
| 3L | 28110227 | 3L | 19093661..19093970 | 526..834 | 1489 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:14:00 has no hits.
BS05614.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:16:39 Download gff for
BS05614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR6-PA | 1..817 | 17..832 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:47:08 Download gff for
BS05614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6818-PA | 1..817 | 17..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:43:22 Download gff for
BS05614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR6-RA | 135..959 | 10..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:22:44 Download gff for
BS05614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR6-RA | 135..959 | 10..834 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:22:44 Download gff for
BS05614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19092804..19093320 | 10..527 | 99 | -> | Plus |
| 3L | 19093663..19093970 | 528..834 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:43:22 Download gff for
BS05614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19085904..19086420 | 10..527 | 99 | -> | Plus |
| arm_3L | 19086763..19087070 | 528..834 | 99 | | Plus |
BS05614.complete Sequence
1445 bp (1445 high quality bases) assembled on 2006-02-02
> BS05614.complete
GAAGTTATCAGTCGACATGGAATCGGATACGCTGGACCAGGAGAGTGCCG
CGGCTGCTCTAAAAAAACTATCGCCAAGTGAAAGTCCCGAAAGTTCGAAG
AAATGGGAGCCGACTTCGGGAGAGTGGGTTGCGGCGGGTGGGGGAGAAGA
GGCGCCGCCAACAAAGAGACAAAAGACTGCAGACGAAAAGGAGGAGAATC
GGGAGGAAGACGAGGATAGCGAGGAGAGCGTTGATGAGGAGGAGGATGAT
GGCGAGGGCATCGTCCAGATTGGCGGCACCATCAGCCCAAGGCATTTCCA
GCGCATCCCCGTCTTTATCGTCGACTACCACAACGATGTGCTGGAGTTCA
TCTACCGCTGCTTTGCCACCCGCCACCTTCCGCTGCAGAACAACACCCTT
GTCCACTTCGACTCGCATCCGGATCTGGTCATTCCACGGCACATTGCCGC
CAGTTCCACCTACCAAAAGGAAACCATGTTAAATGAGCTTAGCATCGAGA
ACTGGATCATGCCCACACTTTATGCAGGACATTTCAACCGCGTCGTGTGG
CTGAAGAACTCATGGTGCCAGCAGCTGCCCACTGGCAGGCACGACTTTAA
GGTTGGACAAAAGGACGATCGCATTGGAGTGGACTGTCCGTTGGACTACT
TTATTGCCGACGGCAACTACTGCACTACGGAGGATCTGCAGGATGCCAAG
AGCGTGGAGCTGCAGGTTCACGATGCAGACAACGAAAGCCTCAATCCGAA
CGAATTCCTAACGGAGAAGGACGCCAAGGGATTCGTGCTGGACATAGACC
TCGACTTTTTCAGCACCTCCAACCCCTTCTTGGAAATATACAAGGATGCC
GATTGCTACAATCAGCTAAAGGAGATCTTCCACTTCGAAAGCGTGGAGAA
GGTGAAGAAGTCGGGCACGGCTACTATAGCAGATTATTTGGCCACGGCAG
AGAGGCGACAGACTCAGTTGGATGCACTGAAGACGATTTTCTGGCATCTG
GAGGAGGAGCGCAATTTCGAGGGACTGGAAAAGCCGGACGAGACCGTGGT
CACGCCCGAAGTGTACGCCAAGATTGTGAAACTGGCCGATCAGCTGCAGG
AGAAATATCCAGACGATGAAATCGACTGGCATTTGATCTTCGATTCGGGC
AGCACCACCGATAATAATGGCTTGCCCCACCACATCAGCATCGCCGAAGA
GTTGGAAACGTACTTTGCAAACTTCAAGCGTTTCTTACAGCGCCTGCCAG
TTCCTCCAGTGGCCATTACAATGGCCCATTCCGCTCAAGATGACTACTGC
CCCCAGGATCAGGTGGCATTCATTGAGGAATGCGTTCTACGCCTGCTTAA
GGAGGTTTTTGGCGAAAGACTGCACGACAAAGCCATCCTGCACTATATGG
ACGATCCTTGGGATGTGATGAAGCTCTAAAAGCTTTCTAGACCAT
BS05614.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:49:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MESR6-RA | 1413 | CG6818-PA | 1..1413 | 17..1429 | 7065 | 100 | Plus |
| MESR6-RB | 1455 | CG6818-PB | 553..1455 | 527..1429 | 4515 | 100 | Plus |
| MESR6-RB | 1455 | CG6818-PB | 1..511 | 17..527 | 2555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:49:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MESR6-RA | 1749 | CG6818-RA | 141..1553 | 17..1429 | 7065 | 100 | Plus |
| MESR6-RB | 1791 | CG6818-RB | 693..1595 | 527..1429 | 4515 | 100 | Plus |
| MESR6-RB | 1791 | CG6818-RB | 141..651 | 17..527 | 2555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:49:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19093661..19094564 | 526..1429 | 4520 | 100 | Plus |
| 3L | 28110227 | 3L | 19092810..19093321 | 17..528 | 2560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:49:23 has no hits.
BS05614.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:54:30 Download gff for
BS05614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR6-RA | 1..1413 | 17..1429 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:30:25 Download gff for
BS05614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR6-RA | 133..1560 | 10..1441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:57 Download gff for
BS05614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR6-RA | 141..1551 | 17..1427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:54:30 Download gff for
BS05614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR6-RA | 133..1560 | 10..1441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:47 Download gff for
BS05614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESR6-RA | 141..1551 | 17..1427 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:27:47 Download gff for
BS05614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19092810..19093320 | 17..527 | 100 | -> | Plus |
| 3L | 19093663..19094562 | 528..1427 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:57 Download gff for
BS05614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19085910..19086420 | 17..527 | 100 | -> | Plus |
| arm_3L | 19086763..19087662 | 528..1427 | 100 | | Plus |
BS05614.pep Sequence
Translation from 16 to 1428
> BS05614.pep
MESDTLDQESAAAALKKLSPSESPESSKKWEPTSGEWVAAGGGEEAPPTK
RQKTADEKEENREEDEDSEESVDEEEDDGEGIVQIGGTISPRHFQRIPVF
IVDYHNDVLEFIYRCFATRHLPLQNNTLVHFDSHPDLVIPRHIAASSTYQ
KETMLNELSIENWIMPTLYAGHFNRVVWLKNSWCQQLPTGRHDFKVGQKD
DRIGVDCPLDYFIADGNYCTTEDLQDAKSVELQVHDADNESLNPNEFLTE
KDAKGFVLDIDLDFFSTSNPFLEIYKDADCYNQLKEIFHFESVEKVKKSG
TATIADYLATAERRQTQLDALKTIFWHLEEERNFEGLEKPDETVVTPEVY
AKIVKLADQLQEKYPDDEIDWHLIFDSGSTTDNNGLPHHISIAEELETYF
ANFKRFLQRLPVPPVAITMAHSAQDDYCPQDQVAFIEECVLRLLKEVFGE
RLHDKAILHYMDDPWDVMKL*
BS05614.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MESR6-PA | 470 | CG6818-PA | 1..470 | 1..470 | 2508 | 100 | Plus |
| MESR6-PB | 484 | CG6818-PB | 1..484 | 1..470 | 2483 | 97.1 | Plus |
