Clone Sequence Records
BS05625.3prime Sequence
952 bp (784 high quality bases) assembled on 2005-12-02
> BS05625.3prime
ATGGTCTAGAAAGCTTCTAAAAGGTTATTGGTTCGATGGGAACAGTGCAT
TCGCTATACATGACGCGGTACATGGCCATTTCAGAGATGCCATGGTAGTG
GACAAAAGCGGCCGCAATGACCAGTATGTGGAATATTTGATGTGATTGAC
CCCAAATGTCAAACTTTCCAGGGAACCAGCGTTCGGGAACACGGAGGGCG
TACAGCAGTGCGCCCAGAATGTAGAGGAGGCCCATCAGAATTAGCCATCC
CAGACTGGCGCGGCTCATCTGGCTGAACCAGCCCTCCATGATGCTGTAGT
GAATAGCTGGAATCACACCCGACAGGCCAAAGCTCATAAATACGCCAGCG
CGCAAGGGACGAAGTGCCGGCTCCGAAAACTTGTCCCATAGCGAGACCAC
GATGGAGAGGATGCCCAGAATGCTAACAACGGATAGGTATATCACCTTTG
GCTGGTAATGACAGTAGAAGCCATAGTACAGCCAAGGCACAAAGGAACCC
ATGATCAGCAGCGCAATTCCACAGTAGTCAAGTTTAGAAAACAGTCTTCC
CATCTCTACAGAATGACAGCTCAGTGTGTGAAAAGCGAATGAGAATCCTA
GGCACACAATCGCACCGATAAAGAAGGCGCCAAAAACGATCTTCTCCTGT
GTCTGGATCTCAACCGAGGGACGCGAGATGAAGTATAATGCCACGCCGAT
GAAGGCGATGCAGCCAAGAAGATGTGTCCAGATGTTGCCCGTTTCCGTGT
GCACGCGGAAAATTGATTTAAAGCACGCACGGAAAGAGGGGAGCGGTGGG
CGATGGCCGCGGTGTAGGAAGTCGTTATCCTGCAGCCACTTGGGTAGATT
TTTGTAGTGGCACACTTTCCAGCTAGCCTCCCAGACCTTGCGCACAAACT
CCTCTGCCTGCTCGGCGGCATTGTGTGCCAATGCGCCCAAATCATTTTCA
TC
BS05625.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5315-PC | 1335 | CG5315-RC | 400..1335 | 952..17 | 4655 | 99.8 | Minus |
CG5315-PB | 1089 | CG5315-RB | 154..1089 | 952..17 | 4655 | 99.8 | Minus |
CG5315-PA | 1335 | CG5315-RA | 400..1335 | 952..17 | 4655 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:13:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdipoR-RE | 1869 | CG5315-RE | 628..1568 | 952..12 | 4675 | 99.8 | Minus |
AdipoR-RD | 1875 | CG5315-RD | 634..1574 | 952..12 | 4675 | 99.8 | Minus |
AdipoR-RA | 2299 | CG5315-RA | 634..1574 | 952..12 | 4675 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 17:13:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22545118..22545472 | 534..888 | 1775 | 100 | Plus |
3R | 32079331 | 3R | 22544757..22545059 | 231..533 | 1515 | 100 | Plus |
3R | 32079331 | 3R | 22544418..22544558 | 12..152 | 690 | 99.3 | Plus |
3R | 32079331 | 3R | 22544614..22544695 | 151..232 | 410 | 100 | Plus |
3R | 32079331 | 3R | 22545683..22545750 | 885..952 | 325 | 98.5 | Plus |
Blast to na_te.dros performed 2015-01-31 17:13:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\BuT6 | 387 | Dbuz\BuT6 BUT6 387bp | 152..188 | 515..479 | 113 | 78.4 | Minus |
BS05625.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:16:59 Download gff for
BS05625.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-PB | 154..1089 | 17..952 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:47:37 Download gff for
BS05625.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-PA | 400..1335 | 17..952 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:31:43 Download gff for
BS05625.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 634..1574 | 12..952 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:48:11 Download gff for
BS05625.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
AdipoR-RA | 634..1574 | 12..952 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:48:11 Download gff for
BS05625.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22544418..22544557 | 12..151 | 99 | <- | Plus |
3R | 22544615..22544694 | 152..231 | 100 | <- | Plus |
3R | 22544758..22545059 | 232..533 | 100 | <- | Plus |
3R | 22545118..22545470 | 534..886 | 100 | <- | Plus |
3R | 22545685..22545750 | 887..952 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:31:43 Download gff for
BS05625.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18370140..18370279 | 12..151 | 99 | <- | Plus |
arm_3R | 18370337..18370416 | 152..231 | 100 | <- | Plus |
arm_3R | 18370480..18370781 | 232..533 | 100 | <- | Plus |
arm_3R | 18370840..18371192 | 534..886 | 100 | <- | Plus |
arm_3R | 18371407..18371472 | 887..952 | 98 | | Plus |
BS05625.5prime Sequence
921 bp (809 high quality bases) assembled on 2005-12-02
> BS05625.5prime
GAAGTTATCAGTCGACATGGATTCGGCCACTAATCTCCTCGAGCAACAGG
GCTCAGCGGCTGATGTGAGTGGCGGGAGCCATCCCGCCGAGGTGGAGGTA
ACCACCCAGGCTCGAGCCACTTTCGGCATGGACGCCGAAGGACATGCTAC
CGGCGAGGCGGTGACCACCACCACGGCCACCTTGCGTAGAGAAGGTTCAG
ACGAGGATATCTTTGAGCAGGTGCAGATGATCCTGCGCAAGCGACGTGGC
TGGGGACCGGAGGACTCGCTTAGCCCCAATGATCTGGACATTCTGGAGTA
CGACGATGAGTTGGTCGAGGAGGATGACGCCGGTTGTCCACTCCCCTCGA
CCCCGGAGGACACACAGCTTATTGAGGCGGAGATGACGGAAGTGCTGAAG
GCCGGAGTTCTCTCCGATGAAATTGATTTGGGCGCATTGGCACACAATGC
CGCCGAGCAGGCAGAGGAGTTTGTGCGCAAGGTCTGGGAGGCTAGCTGGA
AAGTGTGCCACTACAAAAATCTACCCAAGTGGCTGCAGGATAACGACTTC
CTACACCGCGGCCATCGCCCACCGCTCCCCTCTTTCCGTGCGTGCTTTAA
ATCAATTTTCCGCGTGCACACGGAAACGGGCAACATCTGGACACATCTTC
TTGGCTGCATCGCCTTCATCGGCGTGGCATTATACTTCATCTCGCGTCCC
TCGGTTGAGATCCAGACACAGGAGAAGATCGTTTTTGGCGCCTTCTTTAT
CGGTGCGATTGTGTGCCTAGGATTCTCATTCGCTTTTCACACACTGAGCT
GTCATTCTGTAAAGATGGGAAGACTGTTTTCTAAACTTGACTACTGTGGA
ATTGCGCTGCTGATCATGGGTTCTTTGTGCCTTGGCTGTACTATGGCTTC
TACTGTCATTACAGCCAAAGG
BS05625.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5315-PC | 1335 | CG5315-RC | 1..857 | 17..873 | 4260 | 99.8 | Plus |
CG5315-PA | 1335 | CG5315-RA | 1..857 | 17..873 | 4260 | 99.8 | Plus |
CG5315-PB | 1089 | CG5315-RB | 121..611 | 383..873 | 2430 | 99.7 | Plus |
CG5315-PC | 1335 | CG5315-RC | 858..897 | 873..912 | 200 | 100 | Plus |
CG5315-PA | 1335 | CG5315-RA | 858..897 | 873..912 | 200 | 100 | Plus |
CG5315-PB | 1089 | CG5315-RB | 612..651 | 873..912 | 200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:31:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdipoR-RE | 1869 | CG5315-RE | 228..1135 | 16..921 | 4475 | 99.7 | Plus |
AdipoR-RD | 1875 | CG5315-RD | 234..1141 | 16..921 | 4475 | 99.7 | Plus |
AdipoR-RA | 2299 | CG5315-RA | 234..1141 | 16..921 | 4475 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:31:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22546708..22547078 | 386..16 | 1840 | 99.7 | Minus |
3R | 32079331 | 3R | 22545118..22545472 | 834..480 | 1760 | 99.7 | Minus |
3R | 32079331 | 3R | 22545683..22545785 | 483..381 | 515 | 100 | Minus |
3R | 32079331 | 3R | 22544981..22545059 | 912..835 | 345 | 98.7 | Minus |
Blast to na_te.dros performed on 2015-02-09 23:31:36 has no hits.
BS05625.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:17:00 Download gff for
BS05625.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-PC | 1..907 | 17..921 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:47:38 Download gff for
BS05625.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-PA | 1..907 | 17..921 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:32:01 Download gff for
BS05625.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 224..1141 | 7..921 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:55:49 Download gff for
BS05625.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
AdipoR-RA | 224..1141 | 7..921 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:55:49 Download gff for
BS05625.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22544971..22545059 | 835..921 | 97 | <- | Minus |
3R | 22545118..22545470 | 482..834 | 99 | <- | Minus |
3R | 22545685..22545783 | 383..481 | 100 | <- | Minus |
3R | 22546712..22547088 | 7..382 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:32:01 Download gff for
BS05625.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18372434..18372810 | 7..382 | 98 | | Minus |
arm_3R | 18370693..18370781 | 835..921 | 97 | <- | Minus |
arm_3R | 18370840..18371192 | 482..834 | 99 | <- | Minus |
arm_3R | 18371407..18371505 | 383..481 | 100 | <- | Minus |
BS05625.complete Sequence
1367 bp (1367 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ635172
> BS05625.complete
GAAGTTATCAGTCGACATGGATTCGGCCACTAATCTCCTCGAGCAACAGG
GCTCAGCGGCTGATGTGAGTGGCGGGAGCCATCCCGCCGAGGTGGAGGTA
ACCACCCAGGCTCGAGCCACTTTCGGCATGGACGCCGAAGGACATGCTAC
CGGCGAGGCGGTGACCACCACCACGGCCACCTTGCGTAGAGAAGGTTCAG
ACGAGGATATCTTTGAGCAGGTGCAGATGATCCTGCGCAAGCGACGTGGC
TGGGGACCGGAGGACTCGCTTAGCCCCAATGATCTGGACATTCTGGAGTA
CGACGATGAGTTGGTCGAGGAGGATGACGCCGGTTGTCCACTCCCCTCGA
CCCCGGAGGACACACAGCTTATTGAGGCGGAGATGACGGAAGTGCTGAAG
GCCGGAGTTCTCTCCGATGAAATTGATTTGGGCGCATTGGCACACAATGC
CGCCGAGCAGGCAGAGGAGTTTGTGCGCAAGGTCTGGGAGGCTAGCTGGA
AAGTGTGCCACTACAAAAATCTACCCAAGTGGCTGCAGGATAACGACTTC
CTACACCGCGGCCATCGCCCACCGCTCCCCTCTTTCCGTGCGTGCTTTAA
ATCAATTTTCCGCGTGCACACGGAAACGGGCAACATCTGGACACATCTTC
TTGGCTGCATCGCCTTCATCGGCGTGGCATTATACTTCATCTCGCGTCCC
TCGGTTGAGATCCAGACACAGGAGAAGATCGTTTTTGGCGCCTTCTTTAT
CGGTGCGATTGTGTGCCTAGGATTCTCATTCGCTTTTCACACACTGAGCT
GTCATTCTGTAGAGATGGGAAGACTGTTTTCTAAACTTGACTACTGTGGA
ATTGCGCTGCTGATCATGGGTTCCTTTGTGCCTTGGCTGTACTATGGCTT
CTACTGTCATTACCAGCCAAAGGTGATATACCTATCCGTTGTTAGCATTC
TGGGCATCCTCTCCATCGTGGTCTCGCTATGGGACAAGTTTTCGGAGCCG
GCACTTCGTCCCTTGCGCGCTGGCGTATTTATGAGCTTTGGCCTGTCGGG
TGTGATTCCAGCTATTCACTACAGCATCATGGAGGGCTGGTTCAGCCAGA
TGAGCCGCGCCAGTCTGGGATGGCTAATTCTGATGGGCCTCCTCTACATT
CTGGGCGCACTGCTGTACGCCCTCCGTGTTCCCGAACGCTGGTTCCCTGG
AAAGTTTGACATTTGGGGTCAATCACATCAAATATTCCACATACTGGTCA
TTGCGGCCGCTTTTGTCCACTACCATGGCATCTCTGAAATGGCCATGTAC
CGCGTCATGTATAGCGAATGCACTGTTCCCATCGAACCAATAACCTTTTA
GAAGCTTTCTAGACCAT
BS05625.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:52:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdipoR-RE | 1335 | CG5315-PE | 1..1335 | 17..1351 | 6675 | 100 | Plus |
AdipoR-RD | 1335 | CG5315-PD | 1..1335 | 17..1351 | 6675 | 100 | Plus |
AdipoR-RA | 1335 | CG5315-PA | 1..1335 | 17..1351 | 6675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:52:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdipoR-RE | 1869 | CG5315-RE | 228..1568 | 16..1356 | 6690 | 99.9 | Plus |
AdipoR-RD | 1875 | CG5315-RD | 234..1574 | 16..1356 | 6690 | 99.9 | Plus |
AdipoR-RA | 2299 | CG5315-RA | 234..1574 | 16..1356 | 6690 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:52:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22546708..22547078 | 386..16 | 1840 | 99.7 | Minus |
3R | 32079331 | 3R | 22545118..22545472 | 834..480 | 1775 | 100 | Minus |
3R | 32079331 | 3R | 22544757..22545059 | 1137..835 | 1515 | 100 | Minus |
3R | 32079331 | 3R | 22544418..22544558 | 1356..1216 | 690 | 99.3 | Minus |
3R | 32079331 | 3R | 22545683..22545785 | 483..381 | 515 | 100 | Minus |
3R | 32079331 | 3R | 22544614..22544695 | 1217..1136 | 410 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 23:52:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\BuT6 | 387 | Dbuz\BuT6 BUT6 387bp | 152..188 | 853..889 | 113 | 78.4 | Plus |
BS05625.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:54:25 Download gff for
BS05625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 1..1335 | 17..1351 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:30:17 Download gff for
BS05625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 223..1573 | 7..1356 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:40:23 Download gff for
BS05625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 235..1569 | 17..1351 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:54:25 Download gff for
BS05625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 223..1573 | 7..1356 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:10:02 Download gff for
BS05625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
AdipoR-RA | 235..1569 | 17..1351 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:10:02 Download gff for
BS05625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22544758..22545059 | 835..1136 | 100 | <- | Minus |
3R | 22544423..22544557 | 1217..1351 | 100 | <- | Minus |
3R | 22544615..22544694 | 1137..1216 | 100 | <- | Minus |
3R | 22545118..22545470 | 482..834 | 100 | <- | Minus |
3R | 22545685..22545783 | 383..481 | 100 | <- | Minus |
3R | 22546712..22547077 | 17..382 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:40:23 Download gff for
BS05625.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18370480..18370781 | 835..1136 | 100 | <- | Minus |
arm_3R | 18370145..18370279 | 1217..1351 | 100 | <- | Minus |
arm_3R | 18370337..18370416 | 1137..1216 | 100 | <- | Minus |
arm_3R | 18370840..18371192 | 482..834 | 100 | <- | Minus |
arm_3R | 18371407..18371505 | 383..481 | 100 | <- | Minus |
arm_3R | 18372434..18372799 | 17..382 | 100 | | Minus |
BS05625.pep Sequence
Translation from 16 to 1350
> BS05625.pep
MDSATNLLEQQGSAADVSGGSHPAEVEVTTQARATFGMDAEGHATGEAVT
TTTATLRREGSDEDIFEQVQMILRKRRGWGPEDSLSPNDLDILEYDDELV
EEDDAGCPLPSTPEDTQLIEAEMTEVLKAGVLSDEIDLGALAHNAAEQAE
EFVRKVWEASWKVCHYKNLPKWLQDNDFLHRGHRPPLPSFRACFKSIFRV
HTETGNIWTHLLGCIAFIGVALYFISRPSVEIQTQEKIVFGAFFIGAIVC
LGFSFAFHTLSCHSVEMGRLFSKLDYCGIALLIMGSFVPWLYYGFYCHYQ
PKVIYLSVVSILGILSIVVSLWDKFSEPALRPLRAGVFMSFGLSGVIPAI
HYSIMEGWFSQMSRASLGWLILMGLLYILGALLYALRVPERWFPGKFDIW
GQSHQIFHILVIAAAFVHYHGISEMAMYRVMYSECTVPIEPITF*
BS05625.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:11:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdipoR-PE | 444 | CG5315-PE | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PD | 444 | CG5315-PD | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PA | 444 | CG5315-PA | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PC | 444 | CG5315-PC | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PB | 362 | CG5315-PB | 29..362 | 110..444 | 1728 | 97.3 | Plus |