Clone BS05625 Report

Search the DGRC for BS05625

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:56
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptAdipoR-RA
Protein status:BS05625.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05625.3prime Sequence

952 bp (784 high quality bases) assembled on 2005-12-02

> BS05625.3prime
ATGGTCTAGAAAGCTTCTAAAAGGTTATTGGTTCGATGGGAACAGTGCAT
TCGCTATACATGACGCGGTACATGGCCATTTCAGAGATGCCATGGTAGTG
GACAAAAGCGGCCGCAATGACCAGTATGTGGAATATTTGATGTGATTGAC
CCCAAATGTCAAACTTTCCAGGGAACCAGCGTTCGGGAACACGGAGGGCG
TACAGCAGTGCGCCCAGAATGTAGAGGAGGCCCATCAGAATTAGCCATCC
CAGACTGGCGCGGCTCATCTGGCTGAACCAGCCCTCCATGATGCTGTAGT
GAATAGCTGGAATCACACCCGACAGGCCAAAGCTCATAAATACGCCAGCG
CGCAAGGGACGAAGTGCCGGCTCCGAAAACTTGTCCCATAGCGAGACCAC
GATGGAGAGGATGCCCAGAATGCTAACAACGGATAGGTATATCACCTTTG
GCTGGTAATGACAGTAGAAGCCATAGTACAGCCAAGGCACAAAGGAACCC
ATGATCAGCAGCGCAATTCCACAGTAGTCAAGTTTAGAAAACAGTCTTCC
CATCTCTACAGAATGACAGCTCAGTGTGTGAAAAGCGAATGAGAATCCTA
GGCACACAATCGCACCGATAAAGAAGGCGCCAAAAACGATCTTCTCCTGT
GTCTGGATCTCAACCGAGGGACGCGAGATGAAGTATAATGCCACGCCGAT
GAAGGCGATGCAGCCAAGAAGATGTGTCCAGATGTTGCCCGTTTCCGTGT
GCACGCGGAAAATTGATTTAAAGCACGCACGGAAAGAGGGGAGCGGTGGG
CGATGGCCGCGGTGTAGGAAGTCGTTATCCTGCAGCCACTTGGGTAGATT
TTTGTAGTGGCACACTTTCCAGCTAGCCTCCCAGACCTTGCGCACAAACT
CCTCTGCCTGCTCGGCGGCATTGTGTGCCAATGCGCCCAAATCATTTTCA
TC

BS05625.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG5315-PC 1335 CG5315-RC 400..1335 952..17 4655 99.8 Minus
CG5315-PB 1089 CG5315-RB 154..1089 952..17 4655 99.8 Minus
CG5315-PA 1335 CG5315-RA 400..1335 952..17 4655 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:13:26
Subject Length Description Subject Range Query Range Score Percent Strand
AdipoR-RE 1869 CG5315-RE 628..1568 952..12 4675 99.8 Minus
AdipoR-RD 1875 CG5315-RD 634..1574 952..12 4675 99.8 Minus
AdipoR-RA 2299 CG5315-RA 634..1574 952..12 4675 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 17:13:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22545118..22545472 534..888 1775 100 Plus
3R 32079331 3R 22544757..22545059 231..533 1515 100 Plus
3R 32079331 3R 22544418..22544558 12..152 690 99.3 Plus
3R 32079331 3R 22544614..22544695 151..232 410 100 Plus
3R 32079331 3R 22545683..22545750 885..952 325 98.5 Plus
Blast to na_te.dros performed 2015-01-31 17:13:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\BuT6 387 Dbuz\BuT6 BUT6 387bp 152..188 515..479 113 78.4 Minus

BS05625.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:16:59 Download gff for BS05625.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5315-PB 154..1089 17..952 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:47:37 Download gff for BS05625.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5315-PA 400..1335 17..952 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:31:43 Download gff for BS05625.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5315-RA 634..1574 12..952 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:48:11 Download gff for BS05625.3prime
Subject Subject Range Query Range Percent Splice Strand
AdipoR-RA 634..1574 12..952 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:48:11 Download gff for BS05625.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 22544418..22544557 12..151 99 <- Plus
3R 22544615..22544694 152..231 100 <- Plus
3R 22544758..22545059 232..533 100 <- Plus
3R 22545118..22545470 534..886 100 <- Plus
3R 22545685..22545750 887..952 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:31:43 Download gff for BS05625.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18370140..18370279 12..151 99 <- Plus
arm_3R 18370337..18370416 152..231 100 <- Plus
arm_3R 18370480..18370781 232..533 100 <- Plus
arm_3R 18370840..18371192 534..886 100 <- Plus
arm_3R 18371407..18371472 887..952 98   Plus

BS05625.5prime Sequence

921 bp (809 high quality bases) assembled on 2005-12-02

> BS05625.5prime
GAAGTTATCAGTCGACATGGATTCGGCCACTAATCTCCTCGAGCAACAGG
GCTCAGCGGCTGATGTGAGTGGCGGGAGCCATCCCGCCGAGGTGGAGGTA
ACCACCCAGGCTCGAGCCACTTTCGGCATGGACGCCGAAGGACATGCTAC
CGGCGAGGCGGTGACCACCACCACGGCCACCTTGCGTAGAGAAGGTTCAG
ACGAGGATATCTTTGAGCAGGTGCAGATGATCCTGCGCAAGCGACGTGGC
TGGGGACCGGAGGACTCGCTTAGCCCCAATGATCTGGACATTCTGGAGTA
CGACGATGAGTTGGTCGAGGAGGATGACGCCGGTTGTCCACTCCCCTCGA
CCCCGGAGGACACACAGCTTATTGAGGCGGAGATGACGGAAGTGCTGAAG
GCCGGAGTTCTCTCCGATGAAATTGATTTGGGCGCATTGGCACACAATGC
CGCCGAGCAGGCAGAGGAGTTTGTGCGCAAGGTCTGGGAGGCTAGCTGGA
AAGTGTGCCACTACAAAAATCTACCCAAGTGGCTGCAGGATAACGACTTC
CTACACCGCGGCCATCGCCCACCGCTCCCCTCTTTCCGTGCGTGCTTTAA
ATCAATTTTCCGCGTGCACACGGAAACGGGCAACATCTGGACACATCTTC
TTGGCTGCATCGCCTTCATCGGCGTGGCATTATACTTCATCTCGCGTCCC
TCGGTTGAGATCCAGACACAGGAGAAGATCGTTTTTGGCGCCTTCTTTAT
CGGTGCGATTGTGTGCCTAGGATTCTCATTCGCTTTTCACACACTGAGCT
GTCATTCTGTAAAGATGGGAAGACTGTTTTCTAAACTTGACTACTGTGGA
ATTGCGCTGCTGATCATGGGTTCTTTGTGCCTTGGCTGTACTATGGCTTC
TACTGTCATTACAGCCAAAGG

BS05625.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG5315-PC 1335 CG5315-RC 1..857 17..873 4260 99.8 Plus
CG5315-PA 1335 CG5315-RA 1..857 17..873 4260 99.8 Plus
CG5315-PB 1089 CG5315-RB 121..611 383..873 2430 99.7 Plus
CG5315-PC 1335 CG5315-RC 858..897 873..912 200 100 Plus
CG5315-PA 1335 CG5315-RA 858..897 873..912 200 100 Plus
CG5315-PB 1089 CG5315-RB 612..651 873..912 200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:31:39
Subject Length Description Subject Range Query Range Score Percent Strand
AdipoR-RE 1869 CG5315-RE 228..1135 16..921 4475 99.7 Plus
AdipoR-RD 1875 CG5315-RD 234..1141 16..921 4475 99.7 Plus
AdipoR-RA 2299 CG5315-RA 234..1141 16..921 4475 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:31:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22546708..22547078 386..16 1840 99.7 Minus
3R 32079331 3R 22545118..22545472 834..480 1760 99.7 Minus
3R 32079331 3R 22545683..22545785 483..381 515 100 Minus
3R 32079331 3R 22544981..22545059 912..835 345 98.7 Minus
Blast to na_te.dros performed on 2015-02-09 23:31:36 has no hits.

BS05625.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:17:00 Download gff for BS05625.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5315-PC 1..907 17..921 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:47:38 Download gff for BS05625.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5315-PA 1..907 17..921 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:32:01 Download gff for BS05625.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5315-RA 224..1141 7..921 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:55:49 Download gff for BS05625.5prime
Subject Subject Range Query Range Percent Splice Strand
AdipoR-RA 224..1141 7..921 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:55:49 Download gff for BS05625.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 22544971..22545059 835..921 97 <- Minus
3R 22545118..22545470 482..834 99 <- Minus
3R 22545685..22545783 383..481 100 <- Minus
3R 22546712..22547088 7..382 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:32:01 Download gff for BS05625.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18372434..18372810 7..382 98   Minus
arm_3R 18370693..18370781 835..921 97 <- Minus
arm_3R 18370840..18371192 482..834 99 <- Minus
arm_3R 18371407..18371505 383..481 100 <- Minus

BS05625.complete Sequence

1367 bp (1367 high quality bases) assembled on 2006-02-02

GenBank Submission: FJ635172

> BS05625.complete
GAAGTTATCAGTCGACATGGATTCGGCCACTAATCTCCTCGAGCAACAGG
GCTCAGCGGCTGATGTGAGTGGCGGGAGCCATCCCGCCGAGGTGGAGGTA
ACCACCCAGGCTCGAGCCACTTTCGGCATGGACGCCGAAGGACATGCTAC
CGGCGAGGCGGTGACCACCACCACGGCCACCTTGCGTAGAGAAGGTTCAG
ACGAGGATATCTTTGAGCAGGTGCAGATGATCCTGCGCAAGCGACGTGGC
TGGGGACCGGAGGACTCGCTTAGCCCCAATGATCTGGACATTCTGGAGTA
CGACGATGAGTTGGTCGAGGAGGATGACGCCGGTTGTCCACTCCCCTCGA
CCCCGGAGGACACACAGCTTATTGAGGCGGAGATGACGGAAGTGCTGAAG
GCCGGAGTTCTCTCCGATGAAATTGATTTGGGCGCATTGGCACACAATGC
CGCCGAGCAGGCAGAGGAGTTTGTGCGCAAGGTCTGGGAGGCTAGCTGGA
AAGTGTGCCACTACAAAAATCTACCCAAGTGGCTGCAGGATAACGACTTC
CTACACCGCGGCCATCGCCCACCGCTCCCCTCTTTCCGTGCGTGCTTTAA
ATCAATTTTCCGCGTGCACACGGAAACGGGCAACATCTGGACACATCTTC
TTGGCTGCATCGCCTTCATCGGCGTGGCATTATACTTCATCTCGCGTCCC
TCGGTTGAGATCCAGACACAGGAGAAGATCGTTTTTGGCGCCTTCTTTAT
CGGTGCGATTGTGTGCCTAGGATTCTCATTCGCTTTTCACACACTGAGCT
GTCATTCTGTAGAGATGGGAAGACTGTTTTCTAAACTTGACTACTGTGGA
ATTGCGCTGCTGATCATGGGTTCCTTTGTGCCTTGGCTGTACTATGGCTT
CTACTGTCATTACCAGCCAAAGGTGATATACCTATCCGTTGTTAGCATTC
TGGGCATCCTCTCCATCGTGGTCTCGCTATGGGACAAGTTTTCGGAGCCG
GCACTTCGTCCCTTGCGCGCTGGCGTATTTATGAGCTTTGGCCTGTCGGG
TGTGATTCCAGCTATTCACTACAGCATCATGGAGGGCTGGTTCAGCCAGA
TGAGCCGCGCCAGTCTGGGATGGCTAATTCTGATGGGCCTCCTCTACATT
CTGGGCGCACTGCTGTACGCCCTCCGTGTTCCCGAACGCTGGTTCCCTGG
AAAGTTTGACATTTGGGGTCAATCACATCAAATATTCCACATACTGGTCA
TTGCGGCCGCTTTTGTCCACTACCATGGCATCTCTGAAATGGCCATGTAC
CGCGTCATGTATAGCGAATGCACTGTTCCCATCGAACCAATAACCTTTTA
GAAGCTTTCTAGACCAT

BS05625.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:52:24
Subject Length Description Subject Range Query Range Score Percent Strand
AdipoR-RE 1335 CG5315-PE 1..1335 17..1351 6675 100 Plus
AdipoR-RD 1335 CG5315-PD 1..1335 17..1351 6675 100 Plus
AdipoR-RA 1335 CG5315-PA 1..1335 17..1351 6675 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:52:26
Subject Length Description Subject Range Query Range Score Percent Strand
AdipoR-RE 1869 CG5315-RE 228..1568 16..1356 6690 99.9 Plus
AdipoR-RD 1875 CG5315-RD 234..1574 16..1356 6690 99.9 Plus
AdipoR-RA 2299 CG5315-RA 234..1574 16..1356 6690 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:52:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22546708..22547078 386..16 1840 99.7 Minus
3R 32079331 3R 22545118..22545472 834..480 1775 100 Minus
3R 32079331 3R 22544757..22545059 1137..835 1515 100 Minus
3R 32079331 3R 22544418..22544558 1356..1216 690 99.3 Minus
3R 32079331 3R 22545683..22545785 483..381 515 100 Minus
3R 32079331 3R 22544614..22544695 1217..1136 410 100 Minus
Blast to na_te.dros performed 2014-11-27 23:52:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\BuT6 387 Dbuz\BuT6 BUT6 387bp 152..188 853..889 113 78.4 Plus

BS05625.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:54:25 Download gff for BS05625.complete
Subject Subject Range Query Range Percent Splice Strand
CG5315-RA 1..1335 17..1351 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:30:17 Download gff for BS05625.complete
Subject Subject Range Query Range Percent Splice Strand
CG5315-RA 223..1573 7..1356 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:40:23 Download gff for BS05625.complete
Subject Subject Range Query Range Percent Splice Strand
CG5315-RA 235..1569 17..1351 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:54:25 Download gff for BS05625.complete
Subject Subject Range Query Range Percent Splice Strand
CG5315-RA 223..1573 7..1356 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:10:02 Download gff for BS05625.complete
Subject Subject Range Query Range Percent Splice Strand
AdipoR-RA 235..1569 17..1351 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:10:02 Download gff for BS05625.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22544758..22545059 835..1136 100 <- Minus
3R 22544423..22544557 1217..1351 100 <- Minus
3R 22544615..22544694 1137..1216 100 <- Minus
3R 22545118..22545470 482..834 100 <- Minus
3R 22545685..22545783 383..481 100 <- Minus
3R 22546712..22547077 17..382 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:40:23 Download gff for BS05625.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18370480..18370781 835..1136 100 <- Minus
arm_3R 18370145..18370279 1217..1351 100 <- Minus
arm_3R 18370337..18370416 1137..1216 100 <- Minus
arm_3R 18370840..18371192 482..834 100 <- Minus
arm_3R 18371407..18371505 383..481 100 <- Minus
arm_3R 18372434..18372799 17..382 100   Minus

BS05625.pep Sequence

Translation from 16 to 1350

> BS05625.pep
MDSATNLLEQQGSAADVSGGSHPAEVEVTTQARATFGMDAEGHATGEAVT
TTTATLRREGSDEDIFEQVQMILRKRRGWGPEDSLSPNDLDILEYDDELV
EEDDAGCPLPSTPEDTQLIEAEMTEVLKAGVLSDEIDLGALAHNAAEQAE
EFVRKVWEASWKVCHYKNLPKWLQDNDFLHRGHRPPLPSFRACFKSIFRV
HTETGNIWTHLLGCIAFIGVALYFISRPSVEIQTQEKIVFGAFFIGAIVC
LGFSFAFHTLSCHSVEMGRLFSKLDYCGIALLIMGSFVPWLYYGFYCHYQ
PKVIYLSVVSILGILSIVVSLWDKFSEPALRPLRAGVFMSFGLSGVIPAI
HYSIMEGWFSQMSRASLGWLILMGLLYILGALLYALRVPERWFPGKFDIW
GQSHQIFHILVIAAAFVHYHGISEMAMYRVMYSECTVPIEPITF*

BS05625.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:11:20
Subject Length Description Subject Range Query Range Score Percent Strand
AdipoR-PE 444 CG5315-PE 1..444 1..444 2351 100 Plus
AdipoR-PD 444 CG5315-PD 1..444 1..444 2351 100 Plus
AdipoR-PA 444 CG5315-PA 1..444 1..444 2351 100 Plus
AdipoR-PC 444 CG5315-PC 1..444 1..444 2351 100 Plus
AdipoR-PB 362 CG5315-PB 29..362 110..444 1728 97.3 Plus