Clone Sequence Records
BS05628.3prime Sequence
924 bp (747 high quality bases) assembled on 2005-12-02
> BS05628.3prime
ATGGTCTAGAAAGCTTTTACAGCTTCTCGATGAGAATGGAGGAGGCTCCA
CCGCCGCCATTGCAAATGGAGGCGCATCCCAGCTCGCCCTTCTTCAGGCT
GTGCGAAAGATGGGCCACCAGACGGGCTCCGGACATGCCGATTGGATGGC
CAATTGACACGGCACCTCCATGAACATTAACCTTGGCTGGATCCACATCC
AGTTTCTTGATATTGGCCAAAACGACCAGGGAGAAGGCCTCATTGACCTC
CCACATGGCCACGTCTTCCTTGCGAACGCCGGCACGCTTCAGTAATTTGG
GAATGGCCAGAGCTGGGGCAATGGGGAAGTCAATGGGATCGGTCTCCGCA
TCCTGGAAGGCCACAATCCTGGCCAGCGGCTTAATGCCCGCCTTCTGGGC
TGCCTCGGCACTCATCAAAACCACGGCGGCACCGCCATCATTCAAGGTGG
ATGCATTTCCGGCTGTCACAGTGCCATTTTCCCTTTGGAAAACGGTGGCC
AACTGTCCAAACTTGTCAAAATTCACCCGCTTGTACTCCTCATCCTCTGA
GATGACGATCTCCGGCTTCCTCTTCTGCTGAATCTTCACCGGGGCAATCT
CGTCCTGGAACACCTTGTTGGCCCACGCGGCAGCCGATCTCTTGTATGAT
TCAATGGCAAAGTCATCCTGCTGCTGACGTGTGATCTCCAGTTTTTTGGC
CGTATTTTCGGCACAGTTGCCCATGTGGAACTTGTTGTACACATCCCAGA
GGCCATCGAAAACAATGCCGTCGGTGAGATTGACGCCGCCATAGGGCGTG
GCTCCCCTCTTCAGATAGTAGGGAACATTCGACATGGACTCCATACCGCC
GGCAACGACCACATCAGCATAGCCGAGCATCAGGGATTGGGCGCCCAGCA
TAACGGCCTTCATGCCCGACGAGC
BS05628.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-PA | 1233 | CG10932-RA | 326..1233 | 924..17 | 4540 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 12:58:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-RB | 1656 | CG10932-RB | 441..1349 | 924..16 | 4545 | 100 | Minus |
| CG10932-RA | 1517 | CG10932-RA | 441..1349 | 924..16 | 4545 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 12:58:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7887437..7888345 | 16..924 | 4545 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-06 12:58:37 has no hits.
BS05628.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:17:05 Download gff for
BS05628.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-PA | 326..1233 | 17..924 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:47:46 Download gff for
BS05628.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-PA | 326..1233 | 17..924 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:48:17 Download gff for
BS05628.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 441..1349 | 16..924 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:55:41 Download gff for
BS05628.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 441..1349 | 16..924 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:55:41 Download gff for
BS05628.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7887437..7888345 | 16..924 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:48:17 Download gff for
BS05628.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7781470..7782378 | 16..924 | 100 | | Plus |
BS05628.5prime Sequence
748 bp (639 high quality bases) assembled on 2005-12-02
> BS05628.5prime
GAAGTTATCAGTCGACATGTCCGCCCGACTGCTGCAGGCCACGCGTCGCT
GGAGCGCCCATCGCAACTACAGCTCCAAAATCGCCGAAGTTGTGGTGGTT
TCGGCAGCCCGCACACCAATTGGCAGCTTCCAAAGTCAATTGGCCCCACT
GACGGCTACCCAATTGGGAGCCCGTGCCATCGAGGCGGCCATCGAAAAGG
CCGGAATTGCGAAGACCGATGTCCAGGAGGTGATTATGGGCAATGTGGTA
TCTGCTGGTCTGGGACAGGCCCCCGCCCGTCAGGCTGCCATCTTCGCCGG
ACTGCCCACCAATGTATGCTGCACCACGGTGAACAAGGTGTGCTCGTCGG
GCATGAAGGCCGTTATGCTGGGCGCCCAATCCCTGATGCTCGGCTATGCT
GATGTGGTCGTTGCCGGCGGTATGGAGTCCATGTCGAATGTTCCCTACTA
TCTGAAGAGGGGAGCCACGCCCTATGGCGGCGTCAATCTCACCGACGGCA
TTGTTTTCGATGGCCTCTGGGATGTGTACAACAAGTTCCACATGGGCAAC
TGTGCCGAAAATACGGCCAAAAAACTGGAGATCACACGTCAGCAGCAGGA
TGACTTTGCCATTGAATCATACAAGAGATCGGCTGCCGCGTGGGCCAACA
AGGTGTTCCAGGACGAGATTGCCCCGGTGAAGATTCAGCAGAAGAGGAAG
CCGGAGATCGTCATCTCAGAGGATGAGGAGTACAAGCGGGTGAATTTT
BS05628.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-PA | 1233 | CG10932-RA | 1..732 | 17..748 | 3660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:38:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-RB | 1656 | CG10932-RB | 116..847 | 17..748 | 3660 | 100 | Plus |
| CG10932-RA | 1517 | CG10932-RA | 116..847 | 17..748 | 3660 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:38:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7887939..7888670 | 748..17 | 3660 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 23:38:17 has no hits.
BS05628.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:17:06 Download gff for
BS05628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-PA | 1..732 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:47:48 Download gff for
BS05628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-PA | 1..732 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:32:35 Download gff for
BS05628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 116..847 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:56:51 Download gff for
BS05628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 116..847 | 17..748 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:56:51 Download gff for
BS05628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7887939..7888670 | 17..748 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:32:35 Download gff for
BS05628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7781972..7782703 | 17..748 | 100 | | Minus |
BS05628.complete Sequence
1265 bp (1265 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ635174
> BS05628.complete
GAAGTTATCAGTCGACATGTCCGCCCGACTGCTGCAGGCCACGCGTCGCT
GGAGCGCCCATCGCAACTACAGCTCCAAAATCGCCGAAGTTGTGGTGGTT
TCGGCAGCCCGCACACCAATTGGCAGCTTCCAAAGTCAATTGGCCCCACT
GACGGCTACCCAATTGGGAGCCCGTGCCATCGAGGCGGCCATCGAAAAGG
CCGGAATTGCGAAGACCGATGTCCAGGAGGTGATTATGGGCAATGTGGTA
TCTGCTGGTCTGGGACAGGCCCCCGCCCGTCAGGCTGCCATCTTCGCCGG
ACTGCCCACCAATGTATGCTGCACCACGGTGAACAAGGTGTGCTCGTCGG
GCATGAAGGCCGTTATGCTGGGCGCCCAATCCCTGATGCTCGGCTATGCT
GATGTGGTCGTTGCCGGCGGTATGGAGTCCATGTCGAATGTTCCCTACTA
TCTGAAGAGGGGAGCCACGCCCTATGGCGGCGTCAATCTCACCGACGGCA
TTGTTTTCGATGGCCTCTGGGATGTGTACAACAAGTTCCACATGGGCAAC
TGTGCCGAAAATACGGCCAAAAAACTGGAGATCACACGTCAGCAGCAGGA
TGACTTTGCCATTGAATCATACAAGAGATCGGCTGCCGCGTGGGCCAACA
AGGTGTTCCAGGACGAGATTGCCCCGGTGAAGATTCAGCAGAAGAGGAAG
CCGGAGATCGTCATCTCAGAGGATGAGGAGTACAAGCGGGTGAATTTTGA
CAAGTTTGGACAGTTGGCCACCGTTTTCCAAAGGGAAAATGGCACTGTGA
CAGCCGGAAATGCATCCACCTTGAATGATGGCGGTGCCGCCGTGGTTTTG
ATGAGTGCCGAGGCAGCCCAGAAGGCGGGCATTAAGCCGCTGGCCAGGAT
TGTGGCCTTCCAGGATGCGGAGACCGATCCCATTGACTTCCCCATTGCCC
CAGCTCTGGCCATTCCCAAATTACTGAAGCGTGCCGGCGTTCGCAAGGAA
GACGTGGCCATGTGGGAGGTCAATGAGGCCTTCTCCCTGGTCGTTTTGGC
CAATATCAAGAAACTGGATGTGGATCCAGCCAAGGTTAATGTTCATGGAG
GTGCCGTGTCAATTGGCCATCCAATCGGCATGTCCGGAGCCCGTCTGGTG
GCCCATCTTTCGCACAGCCTGAAGAAGGGCGAGCTGGGATGCGCCTCCAT
TTGCAATGGCGGCGGTGGAGCCTCCTCCATTCTCATCGAGAAGCTGTAAA
AGCTTTCTAGACCAT
BS05628.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:15:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-RB | 1233 | CG10932-PB | 1..1233 | 17..1249 | 6165 | 100 | Plus |
| CG10932-RA | 1233 | CG10932-PA | 1..1233 | 17..1249 | 6165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:15:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-RB | 1656 | CG10932-RB | 116..1349 | 17..1250 | 6170 | 100 | Plus |
| CG10932-RA | 1517 | CG10932-RA | 116..1349 | 17..1250 | 6170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:15:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7887437..7888670 | 1250..17 | 6170 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:15:36 has no hits.
BS05628.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:54:12 Download gff for
BS05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 1..1233 | 17..1249 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:30:03 Download gff for
BS05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 83..1316 | 17..1250 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:24 Download gff for
BS05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 116..1346 | 17..1247 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:54:13 Download gff for
BS05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 83..1316 | 17..1250 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:14:35 Download gff for
BS05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 116..1346 | 17..1247 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:14:35 Download gff for
BS05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7887440..7888670 | 17..1247 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:24 Download gff for
BS05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7781473..7782703 | 17..1247 | 100 | | Minus |
BS05628.pep Sequence
Translation from 16 to 1248
> BS05628.pep
MSARLLQATRRWSAHRNYSSKIAEVVVVSAARTPIGSFQSQLAPLTATQL
GARAIEAAIEKAGIAKTDVQEVIMGNVVSAGLGQAPARQAAIFAGLPTNV
CCTTVNKVCSSGMKAVMLGAQSLMLGYADVVVAGGMESMSNVPYYLKRGA
TPYGGVNLTDGIVFDGLWDVYNKFHMGNCAENTAKKLEITRQQQDDFAIE
SYKRSAAAWANKVFQDEIAPVKIQQKRKPEIVISEDEEYKRVNFDKFGQL
ATVFQRENGTVTAGNASTLNDGGAAVVLMSAEAAQKAGIKPLARIVAFQD
AETDPIDFPIAPALAIPKLLKRAGVRKEDVAMWEVNEAFSLVVLANIKKL
DVDPAKVNVHGGAVSIGHPIGMSGARLVAHLSHSLKKGELGCASICNGGG
GASSILIEKL*
BS05628.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-PB | 410 | CG10932-PB | 1..410 | 1..410 | 2068 | 100 | Plus |
| CG10932-PA | 410 | CG10932-PA | 1..410 | 1..410 | 2068 | 100 | Plus |
| CG9149-PA | 392 | CG9149-PA | 1..391 | 22..410 | 754 | 42.1 | Plus |
| yip2-PA | 398 | CG4600-PA | 8..396 | 25..408 | 613 | 35.5 | Plus |
| Thiolase-PA | 469 | CG4581-PA | 44..462 | 25..409 | 441 | 29.1 | Plus |
