Clone Sequence Records
BS05632.3prime Sequence
826 bp (806 high quality bases) assembled on 2005-12-02
> BS05632.3prime
ATGGTCTAGAAAGCTTCTAATAAAGAATCATTGTGAACTGGATACAAAGG
AAGGCCACAAAGCCTCTTAGTTGATAATTCGTTGCGGAGTTCTCCACAAA
AACGCACTTGTTGTCCTCCAGTCGATGGGTCTTACTGCAGGAGCACTCGC
CCCAATTGCACACCATGGGATGGCCAATGGATGCTGTGGCATTCTCCTGG
TCCATGGGCTGCATCCGGCATTCGCTATCGTTTCGACAGAGTGCCCCGAA
CGGCACGATGGGTGCGCAAGTGATCCGCTCCAGATTGTTCACCGCATCGA
GATCGTCGTTTTCGTCCTTGGCCACCTCGTTGGCTACCCTTTTGGGGTAG
TGGGTCGAACGGCAGACGCAGAGGTGATCCAGGCACCTGCCATCGGCACC
CAGGTTTAGCTTGCACGGCGAACTGTGCTCGCACGTGTCACCGTAAGCGG
AGCCCTTGATGCACTTGGTCATGTTGTGGTTGTGCACAAAGTTTTTGGAG
CAGCCGCACCGCTTCGTCTTTGTCAGGCAAATCGAGGCTCCACAGCTGCC
GCAATCCTTGTCCTCTAGACAGCTTGATTGCAAAACAGAAAGACAACGTC
CCTCGTGGAACTCGAATTGGTTAAGGCAGAGGCACTGGTTGCCAATGCAG
GAGCTAAACCGATCCGCCCGCTGGCACTGTTGCTGAAACTCACAGCTTCC
GCCCACCGGGACCACCGCCGGCAGGCAGCGTCTGCGGTCGTCACTGGACA
CATGACCCTCGGAGCAGTGGCACTGCTGCCATCGCGTGTGGCATATGGCA
TTCGGCATGGGACATGGACAGGCACC
BS05632.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-PA | 1035 | CG11674-RA | 226..1035 | 826..17 | 4050 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:34:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-RA | 1172 | CG11674-RA | 302..1111 | 826..17 | 4050 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:34:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14224708..14225270 | 17..579 | 2815 | 100 | Plus |
X | 23542271 | X | 14225332..14225578 | 580..826 | 1235 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 17:34:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 718..791 | 6..79 | 118 | 62.2 | Plus |
BS05632.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:17:14 Download gff for
BS05632.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-PA | 226..1035 | 17..826 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:47:58 Download gff for
BS05632.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-PA | 226..1035 | 17..826 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:52:00 Download gff for
BS05632.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 302..1111 | 17..826 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:27:03 Download gff for
BS05632.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 302..1111 | 17..826 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:27:03 Download gff for
BS05632.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14224708..14225270 | 17..579 | 100 | <- | Plus |
X | 14225332..14225578 | 580..826 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:52:00 Download gff for
BS05632.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14118741..14119303 | 17..579 | 100 | <- | Plus |
arm_X | 14119365..14119611 | 580..826 | 100 | | Plus |
BS05632.5prime Sequence
905 bp (722 high quality bases) assembled on 2005-12-02
> BS05632.5prime
GAAGTTATCAGTCGACATGCTAGCGATGCACAGGTGGATCCTACTGCTGC
TGGCCGGATTTCTAGCGACTGGTCGGGCGGAGGATCTGCTGGAGTTGTCC
TGCAGCTCGGACGCACAGTGCGCCCAGTTTGAGCGCGGTCGCTGCGTGGA
CATGGCCTGCATCTGCACAGCACGTGGCTCCGGCGAACGGGTGCCGTGTA
CGCCGCTGGAGGAGCGCCTCAAGCTGACCAACATCATTGGTGGTGCCTGT
CCATGTCCCATGCCGAATGCCATATGCCACACGCGATGGCAGCAGTGCCA
CTGCTCCGAGGGTCATGTGTCCAGTGACGACCGCAGACGCTGCCTGCCGG
CGGTGGTCCCGGTGGGCGGAAGCTGTGAGTTTCAGCAACAGTGCCAGCGG
GCGGATCGGTTTAGCTCCTGCATTGGCAACCAGTGCCTCTGCCTTAACCA
ATTCGAGTTCCACGAGGGACGTTGTCTTTCTGTTTTGCAATCAAGCTGTC
TAGAGGACAAGGATTGCGGCAGCTGTGGAGCCTCGATTTGCCTGACAAAG
ACGAAGCGGTGCGGCTGCTCCAAAAACTTTGTGCACAACCACAACATGAC
CAAGTGCATCAAGGGCTCCGCTTACGGTGACACGTGCGAGCACAGTTCGC
CGTGCAAGCTAAACCTGGGTGCCGATGGCAGGTGCCTGGATCACCTCTGC
GTCTGCCGTTCGACCCACTACCCCAAAAGGGTAGCCAACGAGGTGGCCAA
GGACGAAAACGACGATCTCGATGCGGTGAACAATCTGGAGCGGATCACTT
GCGCACCCATCGTGCCGTTCGGGGCACTCTGTCGAAACGATAGCGAATGC
CGGATGCAGCCCATGGACCAGGAGAATGCACAGCATCCATTGGCCATCCC
ATGGT
BS05632.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-PA | 1035 | CG11674-RA | 1..863 | 17..879 | 4315 | 100 | Plus |
CG11674-PA | 1035 | CG11674-RA | 864..890 | 879..905 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:42:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-RA | 1172 | CG11674-RA | 75..966 | 15..905 | 4435 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:42:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14225332..14225805 | 488..15 | 2370 | 100 | Minus |
X | 23542271 | X | 14224853..14225270 | 905..489 | 2040 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-10 20:42:17 has no hits.
BS05632.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:17:15 Download gff for
BS05632.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-PA | 1..890 | 17..905 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:47:59 Download gff for
BS05632.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-PA | 1..890 | 17..905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:41:52 Download gff for
BS05632.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 71..966 | 10..905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:11:06 Download gff for
BS05632.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 71..966 | 10..905 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:11:06 Download gff for
BS05632.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14224853..14225270 | 489..905 | 99 | <- | Minus |
X | 14225332..14225809 | 10..488 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:41:52 Download gff for
BS05632.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14118886..14119303 | 489..905 | 99 | <- | Minus |
arm_X | 14119365..14119842 | 10..488 | 99 | | Minus |
BS05632.complete Sequence
1067 bp (1067 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ635178
> BS05632.complete
GAAGTTATCAGTCGACATGCTAGCGATGCACAGGTGGATCCTACTGCTGC
TGGCCGGATTTCTAGCGACTGGTCGGGCGGAGGATCTGCTGGAGTTGTCC
TGCAGCTCGGACGCACAGTGCGCCCAGTTTGAGCGCGGTCGCTGCGTGGA
CATGGCCTGCATCTGCACAGCACGTGGCTCCGGCGAACGGGTGCCGTGTA
CGCCGCTGGAGGAGCGCCTCAAGCTGACCAACATCATTGGTGGTGCCTGT
CCATGTCCCATGCCGAATGCCATATGCCACACGCGATGGCAGCAGTGCCA
CTGCTCCGAGGGTCATGTGTCCAGTGACGACCGCAGACGCTGCCTGCCGG
CGGTGGTCCCGGTGGGCGGAAGCTGTGAGTTTCAGCAACAGTGCCAGCGG
GCGGATCGGTTTAGCTCCTGCATTGGCAACCAGTGCCTCTGCCTTAACCA
ATTCGAGTTCCACGAGGGACGTTGTCTTTCTGTTTTGCAATCAAGCTGTC
TAGAGGACAAGGATTGCGGCAGCTGTGGAGCCTCGATTTGCCTGACAAAG
ACGAAGCGGTGCGGCTGCTCCAAAAACTTTGTGCACAACCACAACATGAC
CAAGTGCATCAAGGGCTCCGCTTACGGTGACACGTGCGAGCACAGTTCGC
CGTGCAAGCTAAACCTGGGTGCCGATGGCAGGTGCCTGGATCACCTCTGC
GTCTGCCGTTCGACCCACTACCCCAAAAGGGTAGCCAACGAGGTGGCCAA
GGACGAAAACGACGATCTCGATGCGGTGAACAATCTGGAGCGGATCACTT
GCGCACCCATCGTGCCGTTCGGGGCACTCTGTCGAAACGATAGCGAATGC
CGGATGCAGCCCATGGACCAGGAGAATGCCACAGCATCCATTGGCCATCC
CATGGTGTGCAATTGGGGCGAGTGCTCCTGCAGTAAGACCCATCGACTGG
AGGACAACAAGTGCGTTTTTGTGGAGAACTCCGCAACGAATTATCAACTA
AGAGGCTTTGTGGCCTTCCTTTGTATCCAGTTCACAATGATTCTTTATTA
GAAGCTTTCTAGACCAT
BS05632.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:35:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-RA | 1035 | CG11674-PA | 1..1035 | 17..1051 | 5175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:35:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-RA | 1172 | CG11674-RA | 75..1111 | 15..1051 | 5185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:35:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14224708..14225270 | 1051..489 | 2815 | 100 | Minus |
X | 23542271 | X | 14225332..14225805 | 488..15 | 2370 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 07:35:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 718..791 | 1062..989 | 118 | 62.2 | Minus |
BS05632.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:54:15 Download gff for
BS05632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 1..1035 | 17..1051 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:30:06 Download gff for
BS05632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 76..1116 | 10..1051 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:18:43 Download gff for
BS05632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 77..1111 | 17..1051 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:54:15 Download gff for
BS05632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 76..1116 | 10..1051 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:13:40 Download gff for
BS05632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 77..1111 | 17..1051 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:40 Download gff for
BS05632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14224708..14225270 | 489..1051 | 100 | <- | Minus |
X | 14225332..14225803 | 17..488 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:18:43 Download gff for
BS05632.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14118741..14119303 | 489..1051 | 100 | <- | Minus |
arm_X | 14119365..14119836 | 17..488 | 100 | | Minus |
BS05632.pep Sequence
Translation from 16 to 1050
> BS05632.pep
MLAMHRWILLLLAGFLATGRAEDLLELSCSSDAQCAQFERGRCVDMACIC
TARGSGERVPCTPLEERLKLTNIIGGACPCPMPNAICHTRWQQCHCSEGH
VSSDDRRRCLPAVVPVGGSCEFQQQCQRADRFSSCIGNQCLCLNQFEFHE
GRCLSVLQSSCLEDKDCGSCGASICLTKTKRCGCSKNFVHNHNMTKCIKG
SAYGDTCEHSSPCKLNLGADGRCLDHLCVCRSTHYPKRVANEVAKDENDD
LDAVNNLERITCAPIVPFGALCRNDSECRMQPMDQENATASIGHPMVCNW
GECSCSKTHRLEDNKCVFVENSATNYQLRGFVAFLCIQFTMILY*
BS05632.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:11:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-PA | 344 | CG11674-PA | 1..344 | 1..344 | 1922 | 100 | Plus |