Clone BS05632 Report

Search the DGRC for BS05632

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:56
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG11674-RA
Protein status:BS05632.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05632.3prime Sequence

826 bp (806 high quality bases) assembled on 2005-12-02

> BS05632.3prime
ATGGTCTAGAAAGCTTCTAATAAAGAATCATTGTGAACTGGATACAAAGG
AAGGCCACAAAGCCTCTTAGTTGATAATTCGTTGCGGAGTTCTCCACAAA
AACGCACTTGTTGTCCTCCAGTCGATGGGTCTTACTGCAGGAGCACTCGC
CCCAATTGCACACCATGGGATGGCCAATGGATGCTGTGGCATTCTCCTGG
TCCATGGGCTGCATCCGGCATTCGCTATCGTTTCGACAGAGTGCCCCGAA
CGGCACGATGGGTGCGCAAGTGATCCGCTCCAGATTGTTCACCGCATCGA
GATCGTCGTTTTCGTCCTTGGCCACCTCGTTGGCTACCCTTTTGGGGTAG
TGGGTCGAACGGCAGACGCAGAGGTGATCCAGGCACCTGCCATCGGCACC
CAGGTTTAGCTTGCACGGCGAACTGTGCTCGCACGTGTCACCGTAAGCGG
AGCCCTTGATGCACTTGGTCATGTTGTGGTTGTGCACAAAGTTTTTGGAG
CAGCCGCACCGCTTCGTCTTTGTCAGGCAAATCGAGGCTCCACAGCTGCC
GCAATCCTTGTCCTCTAGACAGCTTGATTGCAAAACAGAAAGACAACGTC
CCTCGTGGAACTCGAATTGGTTAAGGCAGAGGCACTGGTTGCCAATGCAG
GAGCTAAACCGATCCGCCCGCTGGCACTGTTGCTGAAACTCACAGCTTCC
GCCCACCGGGACCACCGCCGGCAGGCAGCGTCTGCGGTCGTCACTGGACA
CATGACCCTCGGAGCAGTGGCACTGCTGCCATCGCGTGTGGCATATGGCA
TTCGGCATGGGACATGGACAGGCACC

BS05632.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-PA 1035 CG11674-RA 226..1035 826..17 4050 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:34:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-RA 1172 CG11674-RA 302..1111 826..17 4050 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:34:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14224708..14225270 17..579 2815 100 Plus
X 23542271 X 14225332..14225578 580..826 1235 100 Plus
Blast to na_te.dros performed 2015-02-11 17:34:37
Subject Length Description Subject Range Query Range Score Percent Strand
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 718..791 6..79 118 62.2 Plus

BS05632.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:17:14 Download gff for BS05632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-PA 226..1035 17..826 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:47:58 Download gff for BS05632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-PA 226..1035 17..826 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:52:00 Download gff for BS05632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 302..1111 17..826 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:27:03 Download gff for BS05632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 302..1111 17..826 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:27:03 Download gff for BS05632.3prime
Subject Subject Range Query Range Percent Splice Strand
X 14224708..14225270 17..579 100 <- Plus
X 14225332..14225578 580..826 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:52:00 Download gff for BS05632.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14118741..14119303 17..579 100 <- Plus
arm_X 14119365..14119611 580..826 100   Plus

BS05632.5prime Sequence

905 bp (722 high quality bases) assembled on 2005-12-02

> BS05632.5prime
GAAGTTATCAGTCGACATGCTAGCGATGCACAGGTGGATCCTACTGCTGC
TGGCCGGATTTCTAGCGACTGGTCGGGCGGAGGATCTGCTGGAGTTGTCC
TGCAGCTCGGACGCACAGTGCGCCCAGTTTGAGCGCGGTCGCTGCGTGGA
CATGGCCTGCATCTGCACAGCACGTGGCTCCGGCGAACGGGTGCCGTGTA
CGCCGCTGGAGGAGCGCCTCAAGCTGACCAACATCATTGGTGGTGCCTGT
CCATGTCCCATGCCGAATGCCATATGCCACACGCGATGGCAGCAGTGCCA
CTGCTCCGAGGGTCATGTGTCCAGTGACGACCGCAGACGCTGCCTGCCGG
CGGTGGTCCCGGTGGGCGGAAGCTGTGAGTTTCAGCAACAGTGCCAGCGG
GCGGATCGGTTTAGCTCCTGCATTGGCAACCAGTGCCTCTGCCTTAACCA
ATTCGAGTTCCACGAGGGACGTTGTCTTTCTGTTTTGCAATCAAGCTGTC
TAGAGGACAAGGATTGCGGCAGCTGTGGAGCCTCGATTTGCCTGACAAAG
ACGAAGCGGTGCGGCTGCTCCAAAAACTTTGTGCACAACCACAACATGAC
CAAGTGCATCAAGGGCTCCGCTTACGGTGACACGTGCGAGCACAGTTCGC
CGTGCAAGCTAAACCTGGGTGCCGATGGCAGGTGCCTGGATCACCTCTGC
GTCTGCCGTTCGACCCACTACCCCAAAAGGGTAGCCAACGAGGTGGCCAA
GGACGAAAACGACGATCTCGATGCGGTGAACAATCTGGAGCGGATCACTT
GCGCACCCATCGTGCCGTTCGGGGCACTCTGTCGAAACGATAGCGAATGC
CGGATGCAGCCCATGGACCAGGAGAATGCACAGCATCCATTGGCCATCCC
ATGGT

BS05632.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-PA 1035 CG11674-RA 1..863 17..879 4315 100 Plus
CG11674-PA 1035 CG11674-RA 864..890 879..905 135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:42:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-RA 1172 CG11674-RA 75..966 15..905 4435 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:42:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14225332..14225805 488..15 2370 100 Minus
X 23542271 X 14224853..14225270 905..489 2040 99.8 Minus
Blast to na_te.dros performed on 2015-02-10 20:42:17 has no hits.

BS05632.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:17:15 Download gff for BS05632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-PA 1..890 17..905 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:47:59 Download gff for BS05632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-PA 1..890 17..905 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:41:52 Download gff for BS05632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 71..966 10..905 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:11:06 Download gff for BS05632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 71..966 10..905 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:11:06 Download gff for BS05632.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14224853..14225270 489..905 99 <- Minus
X 14225332..14225809 10..488 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:41:52 Download gff for BS05632.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14118886..14119303 489..905 99 <- Minus
arm_X 14119365..14119842 10..488 99   Minus

BS05632.complete Sequence

1067 bp (1067 high quality bases) assembled on 2006-02-02

GenBank Submission: FJ635178

> BS05632.complete
GAAGTTATCAGTCGACATGCTAGCGATGCACAGGTGGATCCTACTGCTGC
TGGCCGGATTTCTAGCGACTGGTCGGGCGGAGGATCTGCTGGAGTTGTCC
TGCAGCTCGGACGCACAGTGCGCCCAGTTTGAGCGCGGTCGCTGCGTGGA
CATGGCCTGCATCTGCACAGCACGTGGCTCCGGCGAACGGGTGCCGTGTA
CGCCGCTGGAGGAGCGCCTCAAGCTGACCAACATCATTGGTGGTGCCTGT
CCATGTCCCATGCCGAATGCCATATGCCACACGCGATGGCAGCAGTGCCA
CTGCTCCGAGGGTCATGTGTCCAGTGACGACCGCAGACGCTGCCTGCCGG
CGGTGGTCCCGGTGGGCGGAAGCTGTGAGTTTCAGCAACAGTGCCAGCGG
GCGGATCGGTTTAGCTCCTGCATTGGCAACCAGTGCCTCTGCCTTAACCA
ATTCGAGTTCCACGAGGGACGTTGTCTTTCTGTTTTGCAATCAAGCTGTC
TAGAGGACAAGGATTGCGGCAGCTGTGGAGCCTCGATTTGCCTGACAAAG
ACGAAGCGGTGCGGCTGCTCCAAAAACTTTGTGCACAACCACAACATGAC
CAAGTGCATCAAGGGCTCCGCTTACGGTGACACGTGCGAGCACAGTTCGC
CGTGCAAGCTAAACCTGGGTGCCGATGGCAGGTGCCTGGATCACCTCTGC
GTCTGCCGTTCGACCCACTACCCCAAAAGGGTAGCCAACGAGGTGGCCAA
GGACGAAAACGACGATCTCGATGCGGTGAACAATCTGGAGCGGATCACTT
GCGCACCCATCGTGCCGTTCGGGGCACTCTGTCGAAACGATAGCGAATGC
CGGATGCAGCCCATGGACCAGGAGAATGCCACAGCATCCATTGGCCATCC
CATGGTGTGCAATTGGGGCGAGTGCTCCTGCAGTAAGACCCATCGACTGG
AGGACAACAAGTGCGTTTTTGTGGAGAACTCCGCAACGAATTATCAACTA
AGAGGCTTTGTGGCCTTCCTTTGTATCCAGTTCACAATGATTCTTTATTA
GAAGCTTTCTAGACCAT

BS05632.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:35:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-RA 1035 CG11674-PA 1..1035 17..1051 5175 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:35:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-RA 1172 CG11674-RA 75..1111 15..1051 5185 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:35:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14224708..14225270 1051..489 2815 100 Minus
X 23542271 X 14225332..14225805 488..15 2370 100 Minus
Blast to na_te.dros performed 2014-11-27 07:35:55
Subject Length Description Subject Range Query Range Score Percent Strand
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 718..791 1062..989 118 62.2 Minus

BS05632.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:54:15 Download gff for BS05632.complete
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 1..1035 17..1051 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:30:06 Download gff for BS05632.complete
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 76..1116 10..1051 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:18:43 Download gff for BS05632.complete
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 77..1111 17..1051 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:54:15 Download gff for BS05632.complete
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 76..1116 10..1051 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:13:40 Download gff for BS05632.complete
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 77..1111 17..1051 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:40 Download gff for BS05632.complete
Subject Subject Range Query Range Percent Splice Strand
X 14224708..14225270 489..1051 100 <- Minus
X 14225332..14225803 17..488 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:18:43 Download gff for BS05632.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14118741..14119303 489..1051 100 <- Minus
arm_X 14119365..14119836 17..488 100   Minus

BS05632.pep Sequence

Translation from 16 to 1050

> BS05632.pep
MLAMHRWILLLLAGFLATGRAEDLLELSCSSDAQCAQFERGRCVDMACIC
TARGSGERVPCTPLEERLKLTNIIGGACPCPMPNAICHTRWQQCHCSEGH
VSSDDRRRCLPAVVPVGGSCEFQQQCQRADRFSSCIGNQCLCLNQFEFHE
GRCLSVLQSSCLEDKDCGSCGASICLTKTKRCGCSKNFVHNHNMTKCIKG
SAYGDTCEHSSPCKLNLGADGRCLDHLCVCRSTHYPKRVANEVAKDENDD
LDAVNNLERITCAPIVPFGALCRNDSECRMQPMDQENATASIGHPMVCNW
GECSCSKTHRLEDNKCVFVENSATNYQLRGFVAFLCIQFTMILY*

BS05632.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:11:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-PA 344 CG11674-PA 1..344 1..344 1922 100 Plus