Clone Sequence Records
BS05635.3prime Sequence
754 bp (696 high quality bases) assembled on 2005-12-02
> BS05635.3prime
ATGGTCTAGAAAGCTTCTACATGTATTTAAATCTCAACCTTAACGTACGC
TCCTGGATGAGTAGCTCCACCTCGTTGCGGAGCACATTGATGTGTTCCAT
AAAGTCCTCGCGAACTGCGTTGCGCCAGTCGTGCAGGCCATCGCTGCCCA
CATGGTCGCAGTCCACGTAGCGGTGCACGAATCCGGTTGATAACGATAGT
TCCACATCGGATGTACTGGCCAAGAGCTGCGCCGGCGGCAGCTCCAGGCG
ATTCAGCAATGTTTTGAACTCAGATCTTCGCTCCGGGTCGTACTGAACGT
TGTCGGGCAACAGTTTCTTCCGGTCATCGAAGCACACGGACATGGTTGCC
AGTTCGAAGCGCGTGATCTCGGAGGAGAAGTGTCGCAGCTGCTGCTGGAG
CGATCCCTTCACCTGGTCCCCAGAGAACTTTGAGTTGGGGAAGAACAGCT
CGTTGGGGCGGAGTAGAAGGGTGAAGCCGGCGTGGTTCACATTCCGCAGC
AAGCAGTCCGTGAGTAATAGTTGATGGATTCGCGAACGTGTGCCATTGGA
CTGCTGGAAGGGAAAGTTAAAAGGCAGGCCATACAGATGAATGTTGGTGC
GCTCCAACAGGTGATGCACTTCCTCTGGCAGTTCGTCGTGGTTGTAGACC
AGGAAATTCTCTATTCCCAATGCCTGGTGGAACAGGAAGAACTGCAGCAA
AGCATTTTCATTACGTGCGAACTTGGAGGTCATGTTGAAGCCAACGAGAT
CAAC
BS05635.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-PA | 1350 | CG11127-RA | 613..1350 | 754..17 | 3690 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:00:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-RA | 1484 | CG11127-RA | 699..1436 | 754..17 | 3690 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:00:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7464202..7464939 | 754..17 | 3690 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:00:31 has no hits.
BS05635.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:17:19 Download gff for
BS05635.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-PA | 613..1350 | 17..754 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:48:07 Download gff for
BS05635.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-PA | 613..1350 | 17..754 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:10:53 Download gff for
BS05635.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 699..1439 | 10..754 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:38:13 Download gff for
BS05635.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 699..1439 | 10..754 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:38:13 Download gff for
BS05635.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7464202..7464942 | 10..754 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:10:53 Download gff for
BS05635.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3351707..3352447 | 10..754 | 99 | | Minus |
BS05635.5prime Sequence
905 bp (738 high quality bases) assembled on 2005-11-29
> BS05635.5prime
GAAGTTATCAGTCGACATGCGGAAATACCAGCAACTGGTGCTGCTGCTCA
TCTCCTGCCTCAGCGTCAGCATCCTGCTGATGTACAAGACCGAGAACAAT
CGCCTAAAGTACGTGCTCAAGTACGTCAACTTCTTCGGACGCAACGATGC
CGCTGTCCTCCGCCGCCTGGAGAACGGAACCAAGGAGGACGGGGCGCAGG
TGCTGTGGCGCCCTCTGCCCGTGTGGCAGGTGATCGGAGACTCCTTTCAT
GCCTACTCCGCCTTCTGGATGCGCAACGAACTGGTGGCCGGCGGCGAAGC
CCACGTTCTGGTGGTCGGAAAAAAGGGAGCAGTAGTCGACTTCCGGTGCA
GCTTGGACCTTCTGGGCGGACGCAGTGTGCAGGGAAAGTTTCGTTTTCAG
AGGGACTCCATTGAGAGCCTGGTGGATGACAAGTCTTCCAACTTCACCAG
CTATCACTTCTTCTGCCAGGTGAGCCGAGATTTCGGTCAGCCCGGCAGTG
TCTCCTTCACGGACATAACAACCACCAGGAGTCCAGTGAGGCTGCGTCTG
CGAAACCTGAGACCAGCGAGCAAGAAGGACGACGACAAGGTGGTAGCTGT
AGCGCACCGACTACCAGCCACCGTTTGCGTTGATCTCGTTGGCTTCAACA
TGACCTCCAAGTTCGCACGTAATGAAAATGCTTTGCTGCAGTTCTTCCTG
TTCCACCAGGCATTGGGAATAGAGAATTTCCTGGTCTACAACCACGACGA
ACTGCCAGAGGAAGTGCATCACCTGTTGGAGCGCACCAACATTCATCTGT
ATGGCCTGCCTTTTAACTTTCCCTTCCAGCAGTCCAATGGCACACGTTCG
CGAATCCATCAACTATTACTCACGGACTGCTTGCTGCGGAATGTGAACCA
CGCCG
BS05635.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:08:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-PA | 1350 | CG11127-RA | 1..889 | 17..905 | 4445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:14:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-RA | 1484 | CG11127-RA | 87..975 | 17..905 | 4445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:14:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7463590..7464478 | 17..905 | 4445 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:14:09 has no hits.
BS05635.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:17:21 Download gff for
BS05635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-PA | 1..889 | 17..905 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:48:08 Download gff for
BS05635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-PA | 1..889 | 17..905 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:43:26 Download gff for
BS05635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 82..975 | 13..905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:23:06 Download gff for
BS05635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 82..975 | 13..905 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:23:06 Download gff for
BS05635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7463585..7464478 | 13..905 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:43:26 Download gff for
BS05635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3351090..3351983 | 13..905 | 99 | | Plus |
BS05635.complete Sequence
1382 bp (1382 high quality bases) assembled on 2006-02-02
GenBank Submission: FJ635179
> BS05635.complete
GAAGTTATCAGTCGACATGCGGAAATACCAGCAACTGGTGCTGCTGCTCA
TCTCCTGCCTCAGCGTCAGCATCCTGCTGATGTACAAGACCGAGAACAAT
CGCCTAAAGTACGTGCTCAAGTACGTCAACTTCTTCGGACGCAACGATGC
CGCTGTCCTCCGCCGCCTGGAGAACGGAACCAAGGAGGACGGGGCGCAGG
TGCTGTGGCGCCCTCTGCCCGTGTGGCAGGTGATCGGAGACTCCTTTCAT
GCCTACTCCGCCTTCTGGATGCGCAACGAACTGGTGGCCGGCGGCGAAGC
CCACGTTCTGGTGGTCGGAAAAAAGGGAGCAGTAGTCGACTTCCGGTGCA
GCTTGGACCTTCTGGGCGGACGCAGTGTGCAGGGAAAGTTTCGTTTTCAG
AGGGACTCCATTGAGAGCCTGGTGGATGACAAGTCTTCCAACTTCACCAG
CTATCACTTCTTCTGCCAGGTGAGCCGAGATTTCGGTCAGCCCGGCAGTG
TCTCCTTCACGGACATAACAACCACCAGGAGTCCAGTGAGGCTGCGTCTG
CGAAACCTGAGACCAGCGAGCAAGAAGGACGACGACAAGGTGGTAGCTGT
AGCGCACCGACTACCAGCCACCGTTTGCGTTGATCTCGTTGGCTTCAACA
TGACCTCCAAGTTCGCACGTAATGAAAATGCTTTGCTGCAGTTCTTCCTG
TTCCACCAGGCATTGGGAATAGAGAATTTCCTGGTCTACAACCACGACGA
ACTGCCAGAGGAAGTGCATCACCTGTTGGAGCGCACCAACATTCATCTGT
ATGGCCTGCCTTTTAACTTTCCCTTCCAGCAGTCCAATGGCACACGTTCG
CGAATCCATCAACTATTACTCACGGACTGCTTGCTGCGGAATGTGAACCA
CGCCGGCTTCACCCTTCTACTCCGCCCCAACGAGCTGTTCTTCCCCAACT
CAAAGTTCTCTGGGGACCAGGTGAAGGGATCGCTCCAGCAGCAGCTGCGA
CACTTCTCCTCCGAGATCACGCGCTTCGAACTGGCAACCATGTCCGTGTG
CTTCGATGACCGGAAGAAACTGTTGCCCGACAACGTTCAGTACGACCCGG
AGCGAAGATCTGAGTTCAAAACATTGCTGAATCGCCTGGAGCTGCCGCCG
GCGCAGCTCTTGGCCAGTACATCCGATGTGGAACTATCGTTATCAACCGG
ATTCGTGCACCGCTACGTGGACTGCGACCATGTGGGCAGCGATGGCCTGC
ACGACTGGCGCAACGCAGTTCGCGAGGACTTTATGGAACACATCAATGTG
CTCCGCAACGAGGTGGAGCTACTCATCCAGGAGCGTACGTTAAGGTTGAG
ATTTAAATACATGTAGAAGCTTTCTAGACCAT
BS05635.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:57:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-RA | 1350 | CG11127-PA | 1..1350 | 17..1366 | 6750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:57:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-RA | 1484 | CG11127-RA | 87..1436 | 17..1366 | 6750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:57:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7463590..7464939 | 17..1366 | 6750 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:57:45 has no hits.
BS05635.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:54:17 Download gff for
BS05635.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 1..1350 | 17..1366 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:30:09 Download gff for
BS05635.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 215..1572 | 13..1373 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:42:11 Download gff for
BS05635.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 87..1436 | 17..1366 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:54:17 Download gff for
BS05635.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 215..1572 | 13..1373 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:47:07 Download gff for
BS05635.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 87..1436 | 17..1366 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:47:07 Download gff for
BS05635.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7463590..7464939 | 17..1366 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:42:11 Download gff for
BS05635.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3351095..3352444 | 17..1366 | 100 | | Plus |
BS05635.pep Sequence
Translation from 16 to 1365
> BS05635.pep
MRKYQQLVLLLISCLSVSILLMYKTENNRLKYVLKYVNFFGRNDAAVLRR
LENGTKEDGAQVLWRPLPVWQVIGDSFHAYSAFWMRNELVAGGEAHVLVV
GKKGAVVDFRCSLDLLGGRSVQGKFRFQRDSIESLVDDKSSNFTSYHFFC
QVSRDFGQPGSVSFTDITTTRSPVRLRLRNLRPASKKDDDKVVAVAHRLP
ATVCVDLVGFNMTSKFARNENALLQFFLFHQALGIENFLVYNHDELPEEV
HHLLERTNIHLYGLPFNFPFQQSNGTRSRIHQLLLTDCLLRNVNHAGFTL
LLRPNELFFPNSKFSGDQVKGSLQQQLRHFSSEITRFELATMSVCFDDRK
KLLPDNVQYDPERRSEFKTLLNRLELPPAQLLASTSDVELSLSTGFVHRY
VDCDHVGSDGLHDWRNAVREDFMEHINVLRNEVELLIQERTLRLRFKYM*
BS05635.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:11:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-PA | 449 | CG11127-PA | 1..449 | 1..449 | 2341 | 100 | Plus |
