Clone BS05644 Report

Search the DGRC for BS05644

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:56
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG2767-RA
Protein status:BS05644.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05644.3prime Sequence

953 bp (738 high quality bases) assembled on 2005-12-02

> BS05644.3prime
ATGGTCTAGAAAGCTTTTAGTTCGTGTACTGATTCTTGAAGGTAAACTCA
GGATGCCTTTCCACACCATGGAAGAATGCAAAGTCACAGATTCGAATATT
CTGGTCCAGGCTAGACAACTTGGCCACCTCCTCGGCCGTCAGTTCGAAAT
CGAAGACGTCCAGATTCTGTTTAAGGCGAGCGGGATTCGTGCTCTTGGGA
ATGGCGGATACACCAGTGTCGATAATCCAGCGGAGGAGGACCTGCGCTGG
CGTCTTGCCATGGCTTGCGGCAATCTCCTTCACCTCAGGGATGTCCATCA
GGTCCGGCAGATCTCTCACGATGCCCGCTCCAGCATTAAACTTGGCGATT
CCCTTGGATCCCAACGGGGAGTAGGCAGTTACGGTAATGTTTTCGGACTT
GCAGAAGTCGACCAGATCTCGCTGCTGCAAATAAACGTGGTGCTCAATCT
GGTTGTTGGCCGGCCGGATCTTGCAGTTCTTCAACAGACGGGCCACCTGA
TCCTTGCTGAAGTTGGATACCCCAATGGACTTGGTGAGACCCTTCTCCAC
CAGGGCCTCCATAGCAACCCAGATGGCTGCGTGGTTCGTGGTAACGTCGA
CCTCCATTAGGCCCTCCTTGTCGAGCTTAAAGCTTCCGTCCTCGTTGATA
TTAATTGTGAAGGGAGTGTGCACCAAATATAAGTCCACATAGTCCAGTTG
CAGATCTTCCAGTGACTTTTTGATGGTTGGCTCAACTTCGTGGGGGCGGT
TGGAAACGGGTGGCACCTTGGTCACAATGAACAGCTCCTCCCGCTTGACC
TTGCCGGCGTCCAGCCAACGCTTTAGGACTCTTCCGATGGCCTTCTCATT
GCCGTAGACTGGCGCCGTATCTATGTGGCGATACCCAGCTTCCAAAGCGC
ATCGATGGCGGTTTCGATTTCTCATCAGATGCCTGCCAGGTGCCGATGCC
AAT

BS05644.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:09:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-PA 990 CG2767-RA 109..990 898..17 4410 100 Minus
CG2767-PA 990 CG2767-RA 52..84 953..921 165 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 01:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-RA 1309 CG2767-RA 195..1134 953..16 4650 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 01:50:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8006217..8006783 66..632 2820 99.8 Plus
3R 32079331 3R 8007332..8007516 754..936 825 98.9 Plus
3R 32079331 3R 8006837..8006964 626..753 640 100 Plus
3R 32079331 3R 8006099..8006149 16..66 255 100 Plus
Blast to na_te.dros performed on 2015-02-09 01:50:50 has no hits.

BS05644.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:17:39 Download gff for BS05644.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-PA 52..990 17..953 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:48:32 Download gff for BS05644.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-PA 52..990 17..953 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 05:58:13 Download gff for BS05644.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 195..1134 16..953 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:11:18 Download gff for BS05644.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 195..1134 16..953 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:11:18 Download gff for BS05644.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 8006099..8006148 16..65 100 <- Plus
3R 8006217..8006776 66..625 100 <- Plus
3R 8006837..8006964 626..753 100 <- Plus
3R 8007332..8007512 754..932 98 <- Plus
3R 8007896..8007916 933..953 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 05:58:13 Download gff for BS05644.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3831821..3831870 16..65 100 <- Plus
arm_3R 3831939..3832498 66..625 100 <- Plus
arm_3R 3832559..3832686 626..753 100 <- Plus
arm_3R 3833054..3833234 754..932 98 <- Plus
arm_3R 3833618..3833638 933..953 100   Plus

BS05644.5prime Sequence

867 bp (749 high quality bases) assembled on 2005-12-02

> BS05644.5prime
GAAGTTATCAGTCGACATGGTCAACACCAAGTTCTTAACGTTCAACAATG
GAGAGAAGATGCCCGTGATTGGCATCGGCACCTGGCAGGCATCTGATGAG
GAAATCGAAACCGCCATCGATGCGGCTTTGGAAGCTGGGTATCGCCACAT
AGATACGGCGCCAGTCTACGGCAATGAGAAGGCCATCGGAAGAGTCCTAA
AGCGTTGGCTGGACGCCGGCAAGGTCAAGCGGGAGGAGCTGTTCATTGTG
ACCAAGGTGCCACCCGTTTCCAACCGCCCCCACGAAGTTGAGCCAACCAT
CAAAAAGTCACTGGAAGATCTGCAACTGGACTATGTGGACTTATATTTGG
TGCACACTCCCTTCACAATTAATATCAACGAGGACGGAAGCTTTAAGCTC
GACAAGGAGGGCCTAATGGAGGTCGACGTTACCACGAACCACGCAGCCAT
CTGGGTTGCTATGGAGGCCCTGGTGGAGAAGGGTCTCACCAAGTCCATTG
GGGTATCCAACTTCAGCAAGGATCAGGTGGCCCGTCTGTTGAAGAACTGC
AAGATCCGGCCGGCCAACAACCAGATTGAGCACCACGTTTATTTGCAGCA
GCGAGATCTGGTCGACTTCTGCAAGTCCGAAAACATTACCGTAACTGCCT
ACTCCCCGTTGGGATCCAAGGGAATCGCCAAGTTTAATGCTGGAGCGGGC
ATCGTGAGAGATCTGCCGGACCTGATGGACATCCCTGAGGTGAAGGAGAT
TGCCCGCAGCCATGGCAAGACGCCAGCGCAGGTCCTCCTCCGCTGGATTA
TCGACACTGGTGTATCCGCCATTCCCAAGAGCACGAATCCCGCTCGCCTT
AAACAGAATCTGGACGT

BS05644.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-PA 990 CG2767-RA 1..738 17..754 3690 100 Plus
CG2767-PA 990 CG2767-RA 742..851 758..867 550 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-RA 1309 CG2767-RA 144..994 17..867 4210 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8006307..8006783 867..391 2325 99.2 Minus
3R 32079331 3R 8007332..8007516 269..85 925 100 Minus
3R 32079331 3R 8006837..8006964 397..270 640 100 Minus
3R 32079331 3R 8007895..8007967 89..17 365 100 Minus
Blast to na_te.dros performed on 2015-02-12 20:18:52 has no hits.

BS05644.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:17:40 Download gff for BS05644.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-PA 1..851 17..867 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:48:33 Download gff for BS05644.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-PA 1..851 17..867 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:37:20 Download gff for BS05644.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 133..994 7..867 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:38:47 Download gff for BS05644.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 133..994 7..867 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:38:47 Download gff for BS05644.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8006307..8006776 398..867 99 <- Minus
3R 8006837..8006964 270..397 100 <- Minus
3R 8007332..8007512 89..269 100 <- Minus
3R 8007896..8007978 7..88 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:37:20 Download gff for BS05644.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3832029..3832498 398..867 99 <- Minus
arm_3R 3832559..3832686 270..397 100 <- Minus
arm_3R 3833054..3833234 89..269 100 <- Minus
arm_3R 3833618..3833700 7..88 95   Minus

BS05644.complete Sequence

1022 bp (1022 high quality bases) assembled on 2006-02-02

GenBank Submission: FJ635186

> BS05644.complete
GAAGTTATCAGTCGACATGGTCAACACCAAGTTCTTAACGTTCAACAATG
GAGAGAAGATGCCCGTGATTGGCATCGGCACCTGGCAGGCATCTGATGAG
GAAATCGAAACCGCCATCGATGCGGCTTTGGAAGCTGGGTATCGCCACAT
AGATACGGCGCCAGTCTACGGCAATGAGAAGGCCATCGGAAGAGTCCTAA
AGCGTTGGCTGGACGCCGGCAAGGTCAAGCGGGAGGAGCTGTTCATTGTG
ACCAAGGTGCCACCCGTTTCCAACCGCCCCCACGAAGTTGAGCCAACCAT
CAAAAAGTCACTGGAAGATCTGCAACTGGACTATGTGGACTTATATTTGG
TGCACACTCCCTTCACAATTAATATCAACGAGGACGGAAGCTTTAAGCTC
GACAAGGAGGGCCTAATGGAGGTCGACGTTACCACGAACCACGCAGCCAT
CTGGGTTGCTATGGAGGCCCTGGTGGAGAAGGGTCTCACCAAGTCCATTG
GGGTATCCAACTTCAGCAAGGATCAGGTGGCCCGTCTGTTGAAGAACTGC
AAGATCCGGCCGGCCAACAACCAGATTGAGCACCACGTTTATTTGCAGCA
GCGAGATCTGGTCGACTTCTGCAAGTCCGAAAACATTACCGTAACTGCCT
ACTCCCCGTTGGGATCCAAGGGAATCGCCAAGTTTAATGCTGGAGCGGGC
ATCGTGAGAGATCTGCCGGACCTGATGGACATCCCTGAGGTGAAGGAGAT
TGCCGCAAGCCATGGCAAGACGCCAGCGCAGGTCCTCCTCCGCTGGATTA
TCGACACTGGTGTATCCGCCATTCCCAAGAGCACGAATCCCGCTCGCCTT
AAACAGAATCTGGACGTCTTCGATTTCGAACTGACGGCCGAGGAGGTGGC
CAAGTTGTCTAGCCTGGACCAGAATATTCGAATCTGTGACTTTGCATTCT
TCCATGGTGTGGAAAGGCATCCTGAGTTTACCTTCAAGAATCAGTACACG
AACTAAAAGCTTTCTAGACCAT

BS05644.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:57:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-RA 990 CG2767-PA 1..990 17..1006 4950 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:57:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-RA 1309 CG2767-RA 144..1134 17..1007 4955 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:57:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8006217..8006783 957..391 2820 99.8 Minus
3R 32079331 3R 8007332..8007516 269..85 925 100 Minus
3R 32079331 3R 8006837..8006964 397..270 640 100 Minus
3R 32079331 3R 8007895..8007967 89..17 365 100 Minus
3R 32079331 3R 8006099..8006149 1007..957 255 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:57:13 has no hits.

BS05644.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:54:08 Download gff for BS05644.complete
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 1..990 17..1006 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:29:59 Download gff for BS05644.complete
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 142..1143 7..1007 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:29 Download gff for BS05644.complete
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 144..1131 17..1004 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:54:09 Download gff for BS05644.complete
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 142..1143 7..1007 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:06:43 Download gff for BS05644.complete
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 144..1131 17..1004 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:06:43 Download gff for BS05644.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8006102..8006148 958..1004 100 <- Minus
3R 8006217..8006776 398..957 100 <- Minus
3R 8006837..8006964 270..397 100 <- Minus
3R 8007332..8007512 89..269 100 <- Minus
3R 8007896..8007967 17..88 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:29 Download gff for BS05644.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3832559..3832686 270..397 100 <- Minus
arm_3R 3833054..3833234 89..269 100 <- Minus
arm_3R 3833618..3833689 17..88 100   Minus
arm_3R 3831824..3831870 958..1004 100 <- Minus
arm_3R 3831939..3832498 398..957 100 <- Minus

BS05644.pep Sequence

Translation from 16 to 1005

> BS05644.pep
MVNTKFLTFNNGEKMPVIGIGTWQASDEEIETAIDAALEAGYRHIDTAPV
YGNEKAIGRVLKRWLDAGKVKREELFIVTKVPPVSNRPHEVEPTIKKSLE
DLQLDYVDLYLVHTPFTININEDGSFKLDKEGLMEVDVTTNHAAIWVAME
ALVEKGLTKSIGVSNFSKDQVARLLKNCKIRPANNQIEHHVYLQQRDLVD
FCKSENITVTAYSPLGSKGIAKFNAGAGIVRDLPDLMDIPEVKEIAASHG
KTPAQVLLRWIIDTGVSAIPKSTNPARLKQNLDVFDFELTAEEVAKLSSL
DQNIRICDFAFFHGVERHPEFTFKNQYTN*

BS05644.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-PA 329 CG2767-PA 1..329 1..329 1705 100 Plus
CG6084-PA 316 CG6084-PA 8..310 9..319 622 42.8 Plus
CG6084-PD 316 CG6084-PD 8..316 9..327 616 42 Plus
CG10638-PD 317 CG10638-PD 10..317 10..327 604 40.4 Plus
CG10638-PA 317 CG10638-PA 10..317 10..327 604 40.4 Plus