Clone BS05675 Report

Search the DGRC for BS05675

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:56
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptCG2091-RA
Protein status:BS05675.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05675.3prime Sequence

984 bp (835 high quality bases) assembled on 2005-12-02

> BS05675.3prime
ATGGTCTAGAAAGCTTTTAGGCACACGCCTGAACAGCGGACTCGGCCTCC
TTGGGCTCCGGCGAGCCCAACTTTATGCGCTTGCACTGCCTCTCCTCCGG
CTCCTCATCGCTAAAGCCTTCCGGTGGAGCGACGTTCAAAGAGTCTGAGT
CAGGGAGCTCCTTATCGTCGCTCGATACTGTCAGCGCTCTAATGGGTAGC
TCCTGCTCATAGAGATCCAACAGCTTATTGCCTTCGTACAGGACAAACGG
CAAGGTGGCTCGCTGATAGTAGTCCGGCATCAGCTCCAAGTTGTTGATCA
CCGTGTCCAGCATGTGGGACTTCTCGCACCATATGCCCGGTGCATCGTTC
CGTACTGGATTGATGTGCACGTGGAGGTGATAGAAGGACGGCTGGTAATG
AAAGTACATGCGCAGCTGATTGGGATTAATGCCGTATAGCTTGGCAATTG
CGTCCTTCGACGCTTGGCGCACGTTGCGCAAAAGATCGAGATGACTTTCA
TTCAAGTCGCGCAGAGACTTGATGTCGCGCTTGTGGACAATTCCCAGCAG
ATAGAGGGTTTCCACATTGCGTCCGTCCCATTTGAGATCGGGCAGAAGGA
TAAAGCCAGTCTTTGGATCCCTGTCCTCGTACACGATACGTTCCGTCTCC
TGCTTATGCTCGAGTATGTTGTAGACCCACTCGAGGGAGAATTGACTTGA
GGTGAGATATGGAAGAGTTATTCTTTGGTAGAGATCAGGAGTCTCCCGGA
TGAGATACTTTTGAGATACTGAGTATTTCTCGATGTGCTTCTCGGTGGCG
GGATAAATGACTGTGCTTTTCACACTGCACAAAATCTGGGTCGGCACAAC
CTGAAAACTGCCGTAGATATTGTTGATAAACTCAGTGTCAACTTTCANGT
CCGCGTAAAATAGCTAGGCTTCTTGGGAGACTCTTCTGATGACGCCGTGG
CACATCGCTTTCCGGGTACGCATTTTTCTCGAAA

BS05675.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG2091-PA 1125 CG2091-RA 237..1125 905..17 4376 99.6 Minus
CG2091-PA 1125 CG2091-RA 190..236 951..905 235 100 Minus
CG2091-PA 1125 CG2091-RA 156..189 984..951 145 97 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 01:50:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG2091-RA 1335 CG2091-RA 253..1223 984..16 4749 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 01:50:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5753430..5754239 16..825 4050 100 Plus
3R 32079331 3R 5754299..5754448 824..971 594 96 Plus
Blast to na_te.dros performed on 2015-02-09 01:50:24 has no hits.

BS05675.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:18:44 Download gff for BS05675.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2091-PA 159..1125 17..981 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:50:00 Download gff for BS05675.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2091-PA 159..1125 17..981 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 05:58:08 Download gff for BS05675.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2091-RA 256..1225 12..981 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:11:15 Download gff for BS05675.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2091-RA 256..1225 12..981 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:11:15 Download gff for BS05675.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 5753428..5754239 12..825 99 <- Plus
3R 5754301..5754448 826..971 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 05:58:08 Download gff for BS05675.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1579150..1579961 12..825 99 <- Plus
arm_3R 1580023..1580170 826..971 95   Plus

BS05675.5prime Sequence

705 bp (704 high quality bases) assembled on 2005-12-02

> BS05675.5prime
GAAGTTATCAGTCGACATGTCGGAAACAGTTGATAGCACAGAGGTAAAGT
CGCCGTCGTACGACTTATCCAAGTTCCAACTGAAGCGAATCCTAACCAAC
AACAGCGTTAGGAAAAGTATATCCCTGCTTGGCACTTTTCCGGATTTAGG
AACCGATGATGCCATTGTTGTTTTCGAGAAAAATGCGTACCGGGAAAGCG
ATGTGGCCACGGCGTCATCAGAAGAGTCTCCCAAGAAGCCTAGCTATTTT
ACCGCGGACCTGAAAGTTGACACTGAGTTTATCAACAATATCTACGGCAG
TTTTCAGGTTGTGCCGACCCAGGATTTGTGCAGTGTGAAAAGCACAGTCA
TTTATCCCGCCACCGAGAAGCACATCGAGAAATACTCAGTATCTCAAAAG
TATCTCATCCGGGAGACTCCTGATCTCTACCAAAGAATAACTCTTCCATA
TCTCACCTCAAGTCAATTCTCCCTCGAGTGGGTCTACAACATACTCGAGC
ATAAGCAGGAGACGGAACGTATCGTGTACGAGGACAGGGATCCAAAGACT
GGCTTTATCCTTCTGCCCGATCTCAAATGGGACGGACGCAATGTGGAAAC
CCTCTATCTGCTGGGAATTGTCCACAAGCGCGACATCAAGTCTCTGCGCG
ACTTGAATGAAAGTCATCTCGATCTTTTGCGCAACGTGCGCCAAGCGTCG
AAGGA

BS05675.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:09:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG2091-PA 1125 CG2091-RA 1..689 17..705 3445 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:47:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG2091-RA 1335 CG2091-RA 98..786 17..705 3445 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:47:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5753867..5754239 705..333 1865 100 Minus
3R 32079331 3R 5754509..5754677 185..17 845 100 Minus
3R 32079331 3R 5754299..5754448 334..185 750 100 Minus
Blast to na_te.dros performed on 2015-02-13 08:47:45 has no hits.

BS05675.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:18:45 Download gff for BS05675.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2091-PA 1..688 17..704 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:50:01 Download gff for BS05675.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2091-PA 1..688 17..704 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:21:50 Download gff for BS05675.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2091-RA 98..785 17..704 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:23:34 Download gff for BS05675.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2091-RA 98..785 17..704 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:23:34 Download gff for BS05675.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5753868..5754239 333..704 100 <- Minus
3R 5754301..5754447 186..332 100 <- Minus
3R 5754509..5754677 17..185 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:21:50 Download gff for BS05675.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1579590..1579961 333..704 100 <- Minus
arm_3R 1580023..1580169 186..332 100 <- Minus
arm_3R 1580231..1580399 17..185 100   Minus

BS05675.complete Sequence

1157 bp (1157 high quality bases) assembled on 2005-10-20

GenBank Submission: FJ635212

> BS05675.complete
GAAGTTATCAGTCGACATGTCGGAAACAGTTGATAGCACAGAGGTAAAGT
CGCCGTCGTACGACTTATCCAAGTTCCAACTGAAGCGAATCCTAACCAAC
AACAGCGTTAGGAAAAGTATATCCCTGCTTGGCACTTTTCCGGATTTAGG
AACCGATGATGCCATTGTTGTTTTCGAGAAAAATGCGTACCGGGAAAGCG
ATGTGGCCACGGCGTCATCAGAAGAGTCTCCCAAGAAGCCTAGCTATTTT
ACCGCGGACCTGAAAGTTGACACTGAGTTTATCAACAATATCTACGGCAG
TTTTCAGGTTGTGCCGACCCAGGATTTGTGCAGTGTGAAAAGCACAGTCA
TTTATCCCGCCACCGAGAAGCACATCGAGAAATACTCAGTATCTCAAAAG
TATCTCATCCGGGAGACTCCTGATCTCTACCAAAGAATAACTCTTCCATA
TCTCACCTCAAGTCAATTCTCCCTCGAGTGGGTCTACAACATACTCGAGC
ATAAGCAGGAGACGGAACGTATCGTGTACGAGGACAGGGATCCAAAGACT
GGCTTTATCCTTCTGCCCGATCTCAAATGGGACGGACGCAATGTGGAAAC
CCTCTATCTGCTGGGAATTGTCCACAAGCGCGACATCAAGTCTCTGCGCG
ACTTGAATGAAAGTCATCTCGATCTTTTGCGCAACGTGCGCCAAGCGTCG
AAGGACGCAATTGCCAAGCTATACGGCATTAATCCCAATCAGCTGCGCAT
GTACTTTCATTACCAGCCGTCCTTCTATCACCTCCACGTGCACATCAATC
CAGTACGGAACGATGCACCGGGCATATGGTGCGAGAAGTCCCACATGCTG
GACACGGTGATCAACAACTTGGAGCTGATGCCGGACTACTATCAGCGAGC
CACCTTGCCGTTTGTCCTGTACGAAGGCAATAAGCTGTTGGATCTCTATG
AGCAGGAGCTACCCATTAGAGCGCTGACAGTATCGAGCGACGATAAGGAG
CTCCCTGACTCAGACTCTTTGAACGTCGCTCCACCGGAAGGCTTTAGCGA
TGAGGAGCCGGAGGAGAGGCAGTGCAAGCGCATAAAGTTGGGCTCGCCGG
AGCCCAAGGAGGCCGAGTCCGCTGTTCAGGCGTGTGCCTAAAAGCTTTCT
AGACCAT

BS05675.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG2091-RA 1125 CG2091-PA 1..1125 17..1141 5625 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:48:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG2091-RA 1335 CG2091-RA 98..1223 17..1142 5630 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:48:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5753430..5754239 1142..333 4050 100 Minus
3R 32079331 3R 5754509..5754677 185..17 845 100 Minus
3R 32079331 3R 5754299..5754448 334..185 750 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:48:30 has no hits.

BS05675.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:22:27 Download gff for BS05675.complete
Subject Subject Range Query Range Percent Splice Strand
CG2091-RA 1..1125 17..1141 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:04:07 Download gff for BS05675.complete
Subject Subject Range Query Range Percent Splice Strand
CG2091-RA 97..1224 17..1146 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:53:13 Download gff for BS05675.complete
Subject Subject Range Query Range Percent Splice Strand
CG2091-RA 98..1220 17..1139 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:22:27 Download gff for BS05675.complete
Subject Subject Range Query Range Percent Splice Strand
CG2091-RA 97..1224 17..1146 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:05:02 Download gff for BS05675.complete
Subject Subject Range Query Range Percent Splice Strand
CG2091-RA 98..1220 17..1139 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:05:02 Download gff for BS05675.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5754509..5754677 17..185 100   Minus
3R 5753433..5754239 333..1139 100 <- Minus
3R 5754301..5754447 186..332 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:53:13 Download gff for BS05675.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1579155..1579961 333..1139 100 <- Minus
arm_3R 1580023..1580169 186..332 100 <- Minus
arm_3R 1580231..1580399 17..185 100   Minus

BS05675.pep Sequence

Translation from 16 to 1140

> BS05675.pep
MSETVDSTEVKSPSYDLSKFQLKRILTNNSVRKSISLLGTFPDLGTDDAI
VVFEKNAYRESDVATASSEESPKKPSYFTADLKVDTEFINNIYGSFQVVP
TQDLCSVKSTVIYPATEKHIEKYSVSQKYLIRETPDLYQRITLPYLTSSQ
FSLEWVYNILEHKQETERIVYEDRDPKTGFILLPDLKWDGRNVETLYLLG
IVHKRDIKSLRDLNESHLDLLRNVRQASKDAIAKLYGINPNQLRMYFHYQ
PSFYHLHVHINPVRNDAPGIWCEKSHMLDTVINNLELMPDYYQRATLPFV
LYEGNKLLDLYEQELPIRALTVSSDDKELPDSDSLNVAPPEGFSDEEPEE
RQCKRIKLGSPEPKEAESAVQACA*

BS05675.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG2091-PA 374 CG2091-PA 1..374 1..374 1948 100 Plus