Clone Sequence Records
BS05693.3prime Sequence
771 bp (770 high quality bases) assembled on 2005-12-02
> BS05693.3prime
ATGGTCTAGAAAGCTTTTAAGCCCTACTGCCCCCGCAGTTTGGCTTCCGT
GGATTTCCTTCGAACTTCTTCAGCTCACGAATCAGGTCACAGGAGCTTGG
AACATCTAGGCAGTTGCATTCAACGCCCCGAGGCTTGCGAAGACGAGAGC
GGCTGCACTCGGAGAAGGAAGGATAGGGGGCCTTGACTTTGACGCAGTCG
GTCTTACGTCTAACGACGTGGCAAGAGACGCTGTCTACGGCCTTACAGCC
GGGCATCTTGATTCTAGGGCAGGGTCCTCCCTCCGTGGGGCATTCGACAT
TCGTGGGACACTCGGCGGATGTCACGAACTTCTTGCGCTTGCGCCTTGGG
ATCGGCGGACGAATTCCCGCCTCGTAGCAGCAGATCTTCTTGGGCTTTAT
CTTTATGGGCGGACACTCCACCCAGGTGACCTGGTACTTGCGCGTGGCCT
TGTCAGAGATCTTGTAGTAGCATTGGTCGTACGGGGGGAACCGTTCCGCG
CAGGGATCGGTGCAGCACTCCGGCGGCTGCTTCACCAGATGATGGAACTG
GAAGCCGTCCTCCTTCTTCGGCGGTGGTTTCTTCGCGAACCGGGGGTCTC
CACAAGCGGTAAAATTACCGCAACCCTTTCCAGAACTGTCACTGCACTTT
GGAGATGGATTGTGGTCCTTTGCGAAAGCGCGATGGCAGACCACGCTCGC
AAAGCTGGGTATTACTCGATTTTGGGTTTTCGTTCCAATACTGCGCCACA
TAGACATGTCGACTGATAACT
BS05693.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:10:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8701-PA | 741 | CG8701-RA | 1..741 | 757..17 | 3705 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:10:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8701-RA | 1070 | CG8701-RA | 179..920 | 758..17 | 3710 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:10:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8371251..8371992 | 758..17 | 3710 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:10:12 has no hits.
BS05693.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:19:22 Download gff for
BS05693.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-PA | 1..741 | 17..757 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:50:50 Download gff for
BS05693.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-PA | 1..741 | 17..757 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:01:00 Download gff for
BS05693.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-RA | 171..920 | 17..768 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:51:13 Download gff for
BS05693.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-RA | 171..920 | 17..768 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:51:13 Download gff for
BS05693.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8371243..8371992 | 17..768 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:01:00 Download gff for
BS05693.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4258748..4259497 | 17..768 | 99 | | Minus |
BS05693.5prime Sequence
771 bp (770 high quality bases) assembled on 2005-12-02
> BS05693.5prime
GAAGTTATCAGTCGACATGTCTATGTGGCGCAGTATTGGAACGAAAACCC
AAAATCGAGTAATACCCAGCTTTGCGAGCGTGGTCTGCCATCGCGCTTTC
GCAAAGGACCACAATCCATCTCCAAAGTGCAGTGACAGTTCTGGAAAGGG
TTGCGGTAATTTTACCGCTTGTGGAGACCCCCGGTTCGCGAAGAAACCAC
CGCCGAAGAAGGAGGACGGCTTCCAGTTCCATCATCTGGTGAAGCAGCCG
CCGGAGTGCTGCACCGATCCCTGCGCGGAACGGTTCCCCCCGTACGACCA
ATGCTACTACAAGATCTCTGACAAGGCCACGCGCAAGTACCAGGTCACCT
GGGTGGAGTGTCCGCCCATAAAGATAAAGCCCAAGAAGATCTGCTGCTAC
GAGGCGGGAATTCGTCCGCCGATCCCAAGGCGCAAGCGCAAGAAGTTCGT
GACATCCGCCGAGTGTCCCACGAATGTCGAATGCCCCACGGAGGGAGGAC
CCTGCCCTAGAATCAAGATGCCCGGCTGTAAGGCCGTAGACAGCGTCTCT
TGCCACGTCGTTAGACGTAAGACCGACTGCGTCAAAGTCAAGGCCCCCTA
TCCTTCCTTCTCCGAGTGCAGCCGCTCTCGTCTTCGCAAGCCTCGGGGCG
TTGAATGCAACTGCCTAGATGTTCCAAGCTCCTGTGACCTGATTCGTGAG
CTGAAGAAGTTCGAAGGAAATCCACGGAAGCCAAACTGCGGGGGCAGTAG
GGCTTAAAAGCTTTCTAGACC
BS05693.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:10:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8701-PA | 741 | CG8701-RA | 1..741 | 17..757 | 3705 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:41:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8701-RA | 1070 | CG8701-RA | 179..920 | 16..757 | 3710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:41:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8371251..8371992 | 16..757 | 3710 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:41:24 has no hits.
BS05693.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:19:23 Download gff for
BS05693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-PA | 1..741 | 17..757 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:50:51 Download gff for
BS05693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-PA | 1..741 | 17..757 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:17:47 Download gff for
BS05693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-RA | 171..920 | 6..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:51:41 Download gff for
BS05693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-RA | 171..920 | 6..757 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:51:41 Download gff for
BS05693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8371243..8371992 | 6..757 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:17:47 Download gff for
BS05693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4258748..4259497 | 6..757 | 99 | | Plus |
BS05693.complete Sequence
773 bp (773 high quality bases) assembled on 2005-10-20
GenBank Submission: FJ635222
> BS05693.complete
GAAGTTATCAGTCGACATGTCTATGTGGCGCAGTATTGGAACGAAAACCC
AAAATCGAGTAATACCCAGCTTTGCGAGCGTGGTCTGCCATCGCGCTTTC
GCAAAGGACCACAATCCATCTCCAAAGTGCAGTGACAGTTCTGGAAAGGG
TTGCGGTAATTTTACCGCTTGTGGAGACCCCCGGTTCGCGAAGAAACCAC
CGCCGAAGAAGGAGGACGGCTTCCAGTTCCATCATCTGGTGAAGCAGCCG
CCGGAGTGCTGCACCGATCCCTGCGCGGAACGGTTCCCCCCGTACGACCA
ATGCTACTACAAGATCTCTGACAAGGCCACGCGCAAGTACCAGGTCACCT
GGGTGGAGTGTCCGCCCATAAAGATAAAGCCCAAGAAGATCTGCTGCTAC
GAGGCGGGAATTCGTCCGCCGATCCCAAGGCGCAAGCGCAAGAAGTTCGT
GACATCCGCCGAGTGTCCCACGAATGTCGAATGCCCCACGGAGGGAGGAC
CCTGCCCTAGAATCAAGATGCCCGGCTGTAAGGCCGTAGACAGCGTCTCT
TGCCACGTCGTTAGACGTAAGACCGACTGCGTCAAAGTCAAGGCCCCCTA
TCCTTCCTTCTCCGAGTGCAGCCGCTCTCGTCTTCGCAAGCCTCGGGGCG
TTGAATGCAACTGCCTAGATGTTCCAAGCTCCTGTGACCTGATTCGTGAG
CTGAAGAAGTTCGAAGGAAATCCACGGAAGCCAAACTGCGGGGGCAGTAG
GGCTTAAAAGCTTTCTAGACCAT
BS05693.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:25:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8701-RA | 741 | CG8701-PA | 1..741 | 17..757 | 3705 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:25:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8701-RA | 1070 | CG8701-RA | 179..920 | 16..757 | 3710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:25:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8371251..8371992 | 16..757 | 3710 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:25:33 has no hits.
BS05693.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:22:19 Download gff for
BS05693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-RA | 1..741 | 17..757 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:03:58 Download gff for
BS05693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-RA | 171..920 | 6..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:40 Download gff for
BS05693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-RA | 180..918 | 17..755 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:22:19 Download gff for
BS05693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-RA | 171..920 | 6..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:51 Download gff for
BS05693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8701-RA | 180..918 | 17..755 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:51 Download gff for
BS05693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8371252..8371990 | 17..755 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:40 Download gff for
BS05693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4258757..4259495 | 17..755 | 100 | | Plus |
BS05693.pep Sequence
Translation from 16 to 756
> BS05693.pep
MSMWRSIGTKTQNRVIPSFASVVCHRAFAKDHNPSPKCSDSSGKGCGNFT
ACGDPRFAKKPPPKKEDGFQFHHLVKQPPECCTDPCAERFPPYDQCYYKI
SDKATRKYQVTWVECPPIKIKPKKICCYEAGIRPPIPRRKRKKFVTSAEC
PTNVECPTEGGPCPRIKMPGCKAVDSVSCHVVRRKTDCVKVKAPYPSFSE
CSRSRLRKPRGVECNCLDVPSSCDLIRELKKFEGNPRKPNCGGSRA*
BS05693.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:33:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8701-PA | 246 | CG8701-PA | 1..246 | 1..246 | 1395 | 100 | Plus |
| CG2127-PB | 289 | CG2127-PB | 58..274 | 36..231 | 338 | 42.5 | Plus |
| CG2127-PA | 305 | CG2127-PA | 74..290 | 36..231 | 338 | 42.5 | Plus |
| CG33340-PA | 229 | CG33340-PA | 46..223 | 52..231 | 295 | 41.2 | Plus |
| CG4691-PA | 262 | CG4691-PA | 84..259 | 64..231 | 272 | 35.7 | Plus |
