Clone BS05767 Report

Search the DGRC for BS05767

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:57
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG5597-RA
Protein status:BS05767.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05767.3prime Sequence

813 bp (812 high quality bases) assembled on 2005-12-03

> BS05767.3prime
ATGGTCTAGAAAGCTTTTAGGCCAATACCTTCAGCTTGCAGAGCAGGTAG
TACAGAAAACAAAACAGCCACAGGCTGAAGTCGACGTGGCTCCTGCCCGC
CGCCGCGGACGTGGCCACCGTGGTCAGGTTCTTGCCGTATCCCTCGAAGG
ACACCACGCACTGGTAGGCATCGGGATCGTCGTCGGTGTCGTAGGCCGCC
ACCACGGCGCTGCCATCGAAGTATCCCTCCTCGTTCTCGTACACCATGGG
CTCCCGCTTCACCACGTCCATGTCGTTGGATATTATCGTGATGGTGGGCC
TGGGATACACGTTCGTCACGGTGCAGTTCAGCTGCGTCTCATTGTGGATC
GTCTTGTGGGACAGCTCCAGGGTGTAGTTCCTCAGGTCTATGACCTGAAC
CCTCTGGTGGCTGGAGAAGGTGTTCAGCGAGGTCTGCACCACGCACTTGT
AGTCGCCGGTGGTGGCGATCGTGGGGTTGATCAAAGCCAGCGAGCTGTAC
TGCTTGCTCGGCTCCGTGGAGCTCTCATAGGTGCTGTCAATCTCGTTCCT
GAACTCGGGGATGGCATATGGAGGTGTTCCGAAGATCCACTGGTATATGG
ACTTGTCGTCTCTGTACCATTTGACGGTGATGAACTTCGGGCTCTCCTCC
ACCTCGTAGTCGCAGTCCAGGATCGTGGGCTCCATCTCCTCGTTCTGAAG
GACTATAATCTTGTCCTCGGACTCATCCCTCGTGGGATAGCATAGCGCAT
CTCTGTGGAGCAGTCCGATGGCCAGAATGGCGATCAGCAGGGTATCCATG
TCGACTGATAACT

BS05767.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:11:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG5597-PA 783 CG5597-RA 1..783 799..17 3915 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:16:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG5597-RA 920 CG5597-RA 106..889 799..16 3920 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:16:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23888125..23888402 559..282 1390 100 Minus
2R 25286936 2R 23888481..23888746 281..16 1330 100 Minus
2R 25286936 2R 23887872..23888064 752..560 965 100 Minus
2R 25286936 2R 23887078..23887126 799..751 245 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:16:20 has no hits.

BS05767.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:21:47 Download gff for BS05767.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5597-PA 1..783 17..799 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:54:05 Download gff for BS05767.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5597-PA 1..783 17..799 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:47:17 Download gff for BS05767.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5597-RA 102..889 16..803 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:55:09 Download gff for BS05767.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5597-RA 102..889 16..803 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:55:09 Download gff for BS05767.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 23888125..23888402 282..559 100 -> Minus
2R 23888481..23888746 16..281 100   Minus
2R 23887074..23887126 751..803 96 -> Minus
2R 23887874..23888064 560..750 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:47:17 Download gff for BS05767.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19774597..19774649 751..803 96 -> Minus
arm_2R 19775397..19775587 560..750 100 -> Minus
arm_2R 19775648..19775925 282..559 100 -> Minus
arm_2R 19776004..19776269 16..281 100   Minus

BS05767.5prime Sequence

813 bp (774 high quality bases) assembled on 2005-12-02

> BS05767.5prime
GAAGTTATCAGTCGACATGGATACCCTGCTGATCGCCATTCTGGCCATCG
GACTGCTCCACAGAGATGCGCTATGCTATCCCACGAGGGATGAGTCCGAG
GACAAGATTATAGTCCTTCAGAACGAGGAGATGGAGCCCACGATCCTGGA
CTGCGACTACGAGGTGGAGGAGAGCCCGAAGTTCATCACCGTCAAATGGT
ACAGAGACGACAAGTCCATATACCAGTGGATCTTCGGAACACCTCCATAT
GCCATCCCCGAGTTCAGGAACGAGATTGACAGCACCTATGAGAGCTCCAC
GGAGCCGAGCAAGCAGTACAGCTCGCTGGCTTTGATCAACCCCACGATCG
CCACCACCGGCGACTACAAGTGCGTGGTGCAGACCTCGCTGAACACCTTC
TCCAGCCACCAGAGGGTTCAGGTCATAGACCTGAGGAACTACACCCTGGA
GCTGTCCCACAAGACGATCCACAATGAGACGCAGCTGAACTGCACCGTGA
CGAACGTGTATCCCAGGCCCACCATCACGATAATATCCAACGACATGGAC
GTGGTGAAGCGGGAGCCCATGGTGTACGAGAACGAGGAGGGATACTTCGA
TGGCAGCGCCGTGGTGGCGGCCTACGACACCGACGACGATCCCGATGCCT
ACCAGTGCGTGGTGTCCTTCGAGGGATACGGCAAGAACCTGACCACGGTG
GCCACGTCCGCGGCGGCGGGCAGGAGCCACGTCGACTTCAGCCTGTGGCT
GTTTTGTTTTCTGTACTACCTGCTCTGNCAGCTGAAGGTATTGGCCTAAA
AGCTTTCTAGACC

BS05767.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:11:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG5597-PA 783 CG5597-RA 1..783 17..799 3871 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 23:31:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG5597-RA 920 CG5597-RA 106..889 17..800 3894 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 23:31:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23888125..23888402 257..534 1390 100 Plus
2R 25286936 2R 23888481..23888746 535..800 1304 99.2 Plus
2R 25286936 2R 23887872..23888064 64..256 965 100 Plus
2R 25286936 2R 23887078..23887126 17..65 245 100 Plus
Blast to na_te.dros performed on 2015-02-09 23:31:11 has no hits.

BS05767.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:21:48 Download gff for BS05767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5597-PA 1..783 17..799 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:54:06 Download gff for BS05767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5597-PA 1..783 17..799 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:31:58 Download gff for BS05767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5597-RA 102..889 13..800 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:55:45 Download gff for BS05767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5597-RA 102..889 13..800 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:55:45 Download gff for BS05767.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23888481..23888746 535..800 99   Plus
2R 23887074..23887126 13..65 96 -> Plus
2R 23887874..23888064 66..256 100 -> Plus
2R 23888125..23888402 257..534 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:31:58 Download gff for BS05767.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19774597..19774649 13..65 96 -> Plus
arm_2R 19775397..19775587 66..256 100 -> Plus
arm_2R 19775648..19775925 257..534 100 -> Plus
arm_2R 19776004..19776269 535..800 99   Plus

BS05767.complete Sequence

815 bp (815 high quality bases) assembled on 2005-10-19

GenBank Submission: FJ635232

> BS05767.complete
GAAGTTATCAGTCGACATGGATACCCTGCTGATCGCCATTCTGGCCATCG
GACTGCTCCACAGAGATGCGCTATGCTATCCCACGAGGGATGAGTCCGAG
GACAAGATTATAGTCCTTCAGAACGAGGAGATGGAGCCCACGATCCTGGA
CTGCGACTACGAGGTGGAGGAGAGCCCGAAGTTCATCACCGTCAAATGGT
ACAGAGACGACAAGTCCATATACCAGTGGATCTTCGGAACACCTCCATAT
GCCATCCCCGAGTTCAGGAACGAGATTGACAGCACCTATGAGAGCTCCAC
GGAGCCGAGCAAGCAGTACAGCTCGCTGGCTTTGATCAACCCCACGATCG
CCACCACCGGCGACTACAAGTGCGTGGTGCAGACCTCGCTGAACACCTTC
TCCAGCCACCAGAGGGTTCAGGTCATAGACCTGAGGAACTACACCCTGGA
GCTGTCCCACAAGACGATCCACAATGAGACGCAGCTGAACTGCACCGTGA
CGAACGTGTATCCCAGGCCCACCATCACGATAATATCCAACGACATGGAC
GTGGTGAAGCGGGAGCCCATGGTGTACGAGAACGAGGAGGGATACTTCGA
TGGCAGCGCCGTGGTGGCGGCCTACGACACCGACGACGATCCCGATGCCT
ACCAGTGCGTGGTGTCCTTCGAGGGATACGGCAAGAACCTGACCACGGTG
GCCACGTCCGCGGCGGCGGGCAGGAGCCACGTCGACTTCAGCCTGTGGCT
GTTTTGTTTTCTGTACTACCTGCTCTGCAAGCTGAAGGTATTGGCCTAAA
AGCTTTCTAGACCAT

BS05767.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:52:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG5597-RA 783 CG5597-PA 1..783 17..799 3915 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:52:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG5597-RA 920 CG5597-RA 106..889 17..800 3920 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:52:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23888125..23888402 257..534 1390 100 Plus
2R 25286936 2R 23888481..23888746 535..800 1330 100 Plus
2R 25286936 2R 23887872..23888064 64..256 965 100 Plus
2R 25286936 2R 23887078..23887126 17..65 245 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:52:26 has no hits.

BS05767.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:23:58 Download gff for BS05767.complete
Subject Subject Range Query Range Percent Splice Strand
CG5597-RA 1..783 17..799 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:05:54 Download gff for BS05767.complete
Subject Subject Range Query Range Percent Splice Strand
CG5597-RA 101..888 13..800 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:19 Download gff for BS05767.complete
Subject Subject Range Query Range Percent Splice Strand
CG5597-RA 106..886 17..797 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:23:59 Download gff for BS05767.complete
Subject Subject Range Query Range Percent Splice Strand
CG5597-RA 101..888 13..800 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:54:36 Download gff for BS05767.complete
Subject Subject Range Query Range Percent Splice Strand
CG5597-RA 106..886 17..797 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:54:36 Download gff for BS05767.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23887078..23887126 17..65 100 -> Plus
2R 23887874..23888064 66..256 100 -> Plus
2R 23888125..23888402 257..534 100 -> Plus
2R 23888481..23888743 535..797 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:19 Download gff for BS05767.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19774601..19774649 17..65 100 -> Plus
arm_2R 19775397..19775587 66..256 100 -> Plus
arm_2R 19775648..19775925 257..534 100 -> Plus
arm_2R 19776004..19776266 535..797 100   Plus

BS05767.pep Sequence

Translation from 16 to 798

> BS05767.pep
MDTLLIAILAIGLLHRDALCYPTRDESEDKIIVLQNEEMEPTILDCDYEV
EESPKFITVKWYRDDKSIYQWIFGTPPYAIPEFRNEIDSTYESSTEPSKQ
YSSLALINPTIATTGDYKCVVQTSLNTFSSHQRVQVIDLRNYTLELSHKT
IHNETQLNCTVTNVYPRPTITIISNDMDVVKREPMVYENEEGYFDGSAVV
AAYDTDDDPDAYQCVVSFEGYGKNLTTVATSAAAGRSHVDFSLWLFCFLY
YLLCKLKVLA*

BS05767.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG5597-PA 260 CG5597-PA 1..260 1..260 1373 100 Plus
CG13532-PA 263 CG13532-PA 39..177 33..173 168 27.6 Plus