Clone BS05791 Report

Search the DGRC for BS05791

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:57
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCyp6d5-RA
Protein status:BS05791.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05791.3prime Sequence

968 bp (791 high quality bases) assembled on 2005-12-03

> BS05791.3prime
ATGGTCTAGAAAGCTTCTACTTTTTGAGAGACAGACGCACGGGAACACCT
GATTTGGGCATCAGCGGTATTCCATACACGCCGAACTCAATCTCACACTT
TTCCTTCCGGATCTCCAGATCGAAGTTCGACAAAACCTTGGCAATCGCTA
TCTTCACATTCACCTTTCCCATGCGGGCGCCGATACACATCCTGGGTCCC
TCGCCGAATGGCAAATAGGCCGCCTGGGTGTAGTCTTTACCATTCTCCAG
ATACCGTTCCGGTTTGTAGGCAAGCGGATCGGGGAAGTACTCCTCATCGC
GGTGCATTCCGATGAGGGAGATTATGATGGGAGTACCCTTTTGGATCACA
AGTTTGCTATCGGGCACAGGATAGTCCTTGGTGCAGATTCTATTCAGCAG
TGGCAGAGCGGGATATTTGCGAGCAGTCTCGAGTATACACGCCTCCAGAT
ACTTCATGTCCGAGATGGCGTCGTATGTCAGCTTTCCGCCATGCTTTTCG
ATGGCACTGCGAACATCCTCCTTAGCCTTTTCCATCACTTCAGGATTTTG
GGTTAGCTCGTATAGGGTAAAGGATGTTGTAGAAGCTGTCGTCTCATAAC
CGGCAACATAGAAGAGGAATAGCTGGCCGGCAATCAAGTCCTTGGACATG
GACTTAACACCATTCTTAGTGCTTTCCGCCGACCAAATATTGTCATCGGT
ATTGATCTTTCCCTGATTCCGCAGCTGCAGCAGAAGTTGCAGCAGATCCT
TGCGAACTATATTGTTCTGTTCCCTGAGATCGACGGTTCGATTGGACAAC
TCGCGCATTCTTTCGGTGGCCTCCTGTTTCCAGCCGATTTTCACAAAGAA
TTTCTCCAGCCCGGGATACAGGAAACTAGATGTTCCACGAATAATATCTT
CAATGGTGTTACGAATCACTTTTTTGCTAATAATCTGAAATTCGTTTGTG
GGATCCGCAAAGCTATCA

BS05791.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:12:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG3050-PA 1527 Cyp6d5-RA 576..1527 968..17 4635 99.4 Minus
CG3050-PB 1122 Cyp6d5-RB 576..1005 968..539 2025 98.8 Minus
CG3050-PB 1122 Cyp6d5-RB 1006..1122 506..390 585 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 13:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp6d5-RA 1640 CG3050-RA 632..1583 968..17 4685 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 13:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14030353..14030784 861..430 2160 100 Minus
3R 32079331 3R 14030875..14031125 430..180 1255 100 Minus
3R 32079331 3R 14031262..14031426 181..17 825 100 Minus
3R 32079331 3R 14030177..14030285 968..860 470 95.4 Minus
Blast to na_te.dros performed on 2015-02-03 13:51:54 has no hits.

BS05791.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:22:34 Download gff for BS05791.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3050-PA 577..1527 17..967 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:55:11 Download gff for BS05791.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3050-PA 577..1527 17..967 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:04:39 Download gff for BS05791.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp6d5-RA 633..1585 12..967 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:52:53 Download gff for BS05791.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp6d5-RA 633..1585 12..967 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 14:52:53 Download gff for BS05791.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 14030178..14030284 861..967 95 -> Minus
3R 14030354..14030784 430..860 100 -> Minus
3R 14030876..14031124 181..429 100 -> Minus
3R 14031263..14031428 12..180 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:04:39 Download gff for BS05791.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9855900..9856006 861..967 95 -> Minus
arm_3R 9856076..9856506 430..860 100 -> Minus
arm_3R 9856598..9856846 181..429 100 -> Minus
arm_3R 9856985..9857150 12..180 98   Minus

BS05791.5prime Sequence

900 bp (839 high quality bases) assembled on 2005-12-03

> BS05791.5prime
GAAGTTATCAGTCGACATGATCGGAATATATTTGCTGATCGCTGCAGTCA
CGCTGCTATATGTCTATCTCAAGTGGACATTTAGCTACTGGGATCGCAAG
GGATTCCCATCGACGGGAGTGAGCATACCGTTCGGTGCCCTGGAATCCGT
GACAAAGGGAAAGCGATCCTTCGGTATGGCCATATACGATATGTACAAGT
CGACAAAGGAACCGGTGATCGGTTTGTATCTCACATTGAGACCGGCACTT
CTCGTCCGAGATGCCCAACTGGCCCACGATGTGTTGGTCAAGGATTTTGC
CAGTTTTCACGATCGTGGCGTGTATGTGGATGAAAAGAACGATCCCATGT
CCGCGAGTTTGTTCCAAATGGAAGGAGCCAGCTGGCGGGCCTTGCGCAAC
AAGCTGACGCCCTCATTCACATCCGGCAAACTGAAGGCCATGTTCGAGAC
CTCAGATTCGGTTGGAGACAAGTTGGTGGACAGCATTAGGAAGCAACTGC
CTGCGAACGGCGCCAAGGAGCTGGAACTCAAGAAGCTAATGGCTACATAC
GCCATCGACATTATTGCCACGACTATTTTTGGACTGGATGTTGATAGCTT
TGCGGATCCCAACAACGAATTCCAGATTATTAGCAAAAAAGTGAATCGTA
ACAACATTGAAGATATTATTCGTGGAACATCTAGTTTCCTGTATCCCGGG
CTGGAGAAATTCTTTGTGAAAATCGGCTGGAAACAGGAGGCCACCGAAAG
AATGCGCGAGTTGTCCAATCGAACCGTCGATCTCAGGGAACAGAACAATA
TAGTTCGCAAGGATCTGCTGCAACTTCTGCTGCAGCTGCGGAATCAGGGA
AAGATCAATACCGATGAACATATTTGGTCGGCGGAAAGCACTAAGAATGG

BS05791.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:12:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG3050-PB 1122 Cyp6d5-RB 1..884 17..900 4370 99.7 Plus
CG3050-PA 1527 Cyp6d5-RA 1..884 17..900 4370 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:53:18
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp6d5-RA 1640 CG3050-RA 57..940 17..900 4390 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:53:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14029284..14029813 17..546 2650 100 Plus
3R 32079331 3R 14030353..14030554 699..900 980 99 Plus
3R 32079331 3R 14030132..14030285 547..700 770 100 Plus
Blast to na_te.dros performed on 2015-02-11 14:53:17 has no hits.

BS05791.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:22:35 Download gff for BS05791.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3050-PA 1..884 17..900 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:55:12 Download gff for BS05791.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3050-PA 1..884 17..900 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:02:26 Download gff for BS05791.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp6d5-RA 45..940 6..900 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:10:29 Download gff for BS05791.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp6d5-RA 45..940 6..900 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:10:29 Download gff for BS05791.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 14029272..14029813 6..546 99 -> Plus
3R 14030132..14030284 547..699 100 -> Plus
3R 14030354..14030554 700..900 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:02:26 Download gff for BS05791.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9855854..9856006 547..699 100 -> Plus
arm_3R 9854994..9855535 6..546 99 -> Plus
arm_3R 9856076..9856276 700..900 99   Plus

BS05791.complete Sequence

1559 bp (1559 high quality bases) assembled on 2005-10-19

GenBank Submission: FJ635236

> BS05791.complete
GAAGTTATCAGTCGACATGATCGGAATATATTTGCTGATCGCTGCAGTCA
CGCTGCTATATGTCTATCTCAAGTGGACATTTAGCTACTGGGATCGCAAG
GGATTCCCATCGACGGGAGTGAGCATACCGTTCGGTGCCCTGGAATCCGT
GACAAAGGGAAAGCGATCCTTCGGTATGGCCATATACGATATGTACAAGT
CGACAAAGGAACCGGTGATCGGTTTGTATCTCACATTGAGACCGGCACTT
CTCGTCCGAGATGCCCAACTGGCCCACGATGTGTTGGTCAAGGATTTTGC
CAGTTTTCACGATCGTGGCGTGTATGTGGATGAAAAGAACGATCCCATGT
CCGCGAGTTTGTTCCAAATGGAAGGAGCCAGCTGGCGGGCCTTGCGCAAC
AAGCTGACGCCCTCATTCACATCCGGCAAACTGAAGGCCATGTTCGAGAC
CTCAGATTCGGTTGGAGACAAGTTGGTGGACAGCATTAGGAAGCAACTGC
CTGCGAACGGCGCCAAGGAGCTGGAACTCAAGAAGCTAATGGCTACATAC
GCCATCGACATTATTGCCACGACTATTTTTGGACTGGATGTTGATAGCTT
TGCGGATCCCAACAACGAATTCCAGATTATTAGCAAAAAAGTGAATCGTA
ACAACATTGAAGATATTATTCGTGGAACATCTAGTTTCCTGTATCCCGGG
CTGGAGAAATTCTTTGTGAAAATCGGCTGGAAACAGGAGGCCACCGAAAG
AATGCGCGAGTTGTCCAATCGAACCGTCGATCTCAGGGAACAGAACAATA
TAGTTCGCAAGGATCTGCTGCAACTTCTGCTGCAGCTGCGGAATCAGGGA
AAGATCAATACCGATGACAATATTTGGTCGGCGGAAAGCACTAAGAATGG
TGTTAAGTCCATGTCCAAGGACTTGATTGCCGGCCAGCTATTCCTCTTCT
ATGTTGCCGGTTATGAGACGACAGCTTCTACAACATCCTTTACCCTATAC
GAGCTAACCCAAAATCCTGAAGTGATGGAAAAGGCTAAGGAGGATGTTCG
CAGTGCCATCGAAAAGCATGGCGGAAAGCTGACATACGACGCCATCTCGG
ACATGAAGTATCTGGAGGCGTGTATACTCGAGACTGCTCGCAAATATCCC
GCTCTGCCACTGCTGAATAGAATCTGCACCAAGGACTATCCTGTGCCCGA
TAGCAAACTTGTGATCCAAAAGGGTACTCCCATCATAATCTCCCTCATCG
GAATGCACCGCGATGAGGAGTACTTCCCCGATCCGCTTGCCTACAAACCG
GAACGGTATCTGGAGAATGGTAAAGACTACACCCAGGCGGCCTATTTGCC
ATTCGGCGAGGGACCCAGGATGTGTATCGGCGCCCGCATGGGAAAGGTGA
ATGTGAAGATAGCGATTGCCAAGGTTTTGTCGAACTTCGATCTGGAGATC
CGGAAGGAAAAGTGTGAGATTGAGTTCGGCGTGTATGGAATACCGCTGAT
GCCCAAATCAGGTGTTCCCGTGCGTCTGTCTCTCAAAAAGTAGAAGCTTT
CTAGACCAT

BS05791.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:24:08
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp6d5-RA 1527 CG3050-PA 1..1527 17..1543 7635 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:24:09
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp6d5-RA 1640 CG3050-RA 57..1583 17..1543 7635 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:24:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14029284..14029813 17..546 2650 100 Plus
3R 32079331 3R 14030353..14030784 699..1130 2160 100 Plus
3R 32079331 3R 14030875..14031125 1130..1380 1255 100 Plus
3R 32079331 3R 14031262..14031426 1379..1543 825 100 Plus
3R 32079331 3R 14030132..14030285 547..700 770 100 Plus
Blast to na_te.dros performed on 2014-11-27 10:24:07 has no hits.

BS05791.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:23:44 Download gff for BS05791.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp6d5-RA 1..1527 17..1543 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:05:37 Download gff for BS05791.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp6d5-RA 43..1583 6..1548 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:08:13 Download gff for BS05791.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp6d5-RA 57..1583 17..1543 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:23:44 Download gff for BS05791.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp6d5-RA 43..1583 6..1548 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:20:47 Download gff for BS05791.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp6d5-RA 57..1583 17..1543 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:20:47 Download gff for BS05791.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14030132..14030284 547..699 100 -> Plus
3R 14029284..14029813 17..546 100 -> Plus
3R 14030354..14030784 700..1130 100 -> Plus
3R 14030876..14031124 1131..1379 100 -> Plus
3R 14031263..14031426 1380..1543 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:08:13 Download gff for BS05791.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9855006..9855535 17..546 100 -> Plus
arm_3R 9855854..9856006 547..699 100 -> Plus
arm_3R 9856076..9856506 700..1130 100 -> Plus
arm_3R 9856598..9856846 1131..1379 100 -> Plus
arm_3R 9856985..9857148 1380..1543 100   Plus

BS05791.pep Sequence

Translation from 16 to 1542

> BS05791.pep
MIGIYLLIAAVTLLYVYLKWTFSYWDRKGFPSTGVSIPFGALESVTKGKR
SFGMAIYDMYKSTKEPVIGLYLTLRPALLVRDAQLAHDVLVKDFASFHDR
GVYVDEKNDPMSASLFQMEGASWRALRNKLTPSFTSGKLKAMFETSDSVG
DKLVDSIRKQLPANGAKELELKKLMATYAIDIIATTIFGLDVDSFADPNN
EFQIISKKVNRNNIEDIIRGTSSFLYPGLEKFFVKIGWKQEATERMRELS
NRTVDLREQNNIVRKDLLQLLLQLRNQGKINTDDNIWSAESTKNGVKSMS
KDLIAGQLFLFYVAGYETTASTTSFTLYELTQNPEVMEKAKEDVRSAIEK
HGGKLTYDAISDMKYLEACILETARKYPALPLLNRICTKDYPVPDSKLVI
QKGTPIIISLIGMHRDEEYFPDPLAYKPERYLENGKDYTQAAYLPFGEGP
RMCIGARMGKVNVKIAIAKVLSNFDLEIRKEKCEIEFGVYGIPLMPKSGV
PVRLSLKK*

BS05791.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp6d5-PA 508 CG3050-PA 1..508 1..508 2607 100 Plus
Cyp6d4-PA 515 CG12800-PA 5..508 4..505 1388 51.7 Plus
Cyp6d2-PA 512 CG4373-PA 4..512 4..508 1290 49 Plus
Cyp6a2-PA 506 CG9438-PA 5..476 4..478 818 35.8 Plus
Cyp6a13-PA 493 CG2397-PA 1..487 1..504 782 33.9 Plus