Clone Sequence Records
BS05791.3prime Sequence
968 bp (791 high quality bases) assembled on 2005-12-03
> BS05791.3prime
ATGGTCTAGAAAGCTTCTACTTTTTGAGAGACAGACGCACGGGAACACCT
GATTTGGGCATCAGCGGTATTCCATACACGCCGAACTCAATCTCACACTT
TTCCTTCCGGATCTCCAGATCGAAGTTCGACAAAACCTTGGCAATCGCTA
TCTTCACATTCACCTTTCCCATGCGGGCGCCGATACACATCCTGGGTCCC
TCGCCGAATGGCAAATAGGCCGCCTGGGTGTAGTCTTTACCATTCTCCAG
ATACCGTTCCGGTTTGTAGGCAAGCGGATCGGGGAAGTACTCCTCATCGC
GGTGCATTCCGATGAGGGAGATTATGATGGGAGTACCCTTTTGGATCACA
AGTTTGCTATCGGGCACAGGATAGTCCTTGGTGCAGATTCTATTCAGCAG
TGGCAGAGCGGGATATTTGCGAGCAGTCTCGAGTATACACGCCTCCAGAT
ACTTCATGTCCGAGATGGCGTCGTATGTCAGCTTTCCGCCATGCTTTTCG
ATGGCACTGCGAACATCCTCCTTAGCCTTTTCCATCACTTCAGGATTTTG
GGTTAGCTCGTATAGGGTAAAGGATGTTGTAGAAGCTGTCGTCTCATAAC
CGGCAACATAGAAGAGGAATAGCTGGCCGGCAATCAAGTCCTTGGACATG
GACTTAACACCATTCTTAGTGCTTTCCGCCGACCAAATATTGTCATCGGT
ATTGATCTTTCCCTGATTCCGCAGCTGCAGCAGAAGTTGCAGCAGATCCT
TGCGAACTATATTGTTCTGTTCCCTGAGATCGACGGTTCGATTGGACAAC
TCGCGCATTCTTTCGGTGGCCTCCTGTTTCCAGCCGATTTTCACAAAGAA
TTTCTCCAGCCCGGGATACAGGAAACTAGATGTTCCACGAATAATATCTT
CAATGGTGTTACGAATCACTTTTTTGCTAATAATCTGAAATTCGTTTGTG
GGATCCGCAAAGCTATCA
BS05791.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:12:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3050-PA | 1527 | Cyp6d5-RA | 576..1527 | 968..17 | 4635 | 99.4 | Minus |
CG3050-PB | 1122 | Cyp6d5-RB | 576..1005 | 968..539 | 2025 | 98.8 | Minus |
CG3050-PB | 1122 | Cyp6d5-RB | 1006..1122 | 506..390 | 585 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 13:51:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp6d5-RA | 1640 | CG3050-RA | 632..1583 | 968..17 | 4685 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 13:51:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14030353..14030784 | 861..430 | 2160 | 100 | Minus |
3R | 32079331 | 3R | 14030875..14031125 | 430..180 | 1255 | 100 | Minus |
3R | 32079331 | 3R | 14031262..14031426 | 181..17 | 825 | 100 | Minus |
3R | 32079331 | 3R | 14030177..14030285 | 968..860 | 470 | 95.4 | Minus |
Blast to na_te.dros performed on 2015-02-03 13:51:54 has no hits.
BS05791.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:22:34 Download gff for
BS05791.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3050-PA | 577..1527 | 17..967 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:55:11 Download gff for
BS05791.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3050-PA | 577..1527 | 17..967 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:04:39 Download gff for
BS05791.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp6d5-RA | 633..1585 | 12..967 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:52:53 Download gff for
BS05791.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp6d5-RA | 633..1585 | 12..967 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 14:52:53 Download gff for
BS05791.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14030178..14030284 | 861..967 | 95 | -> | Minus |
3R | 14030354..14030784 | 430..860 | 100 | -> | Minus |
3R | 14030876..14031124 | 181..429 | 100 | -> | Minus |
3R | 14031263..14031428 | 12..180 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:04:39 Download gff for
BS05791.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9855900..9856006 | 861..967 | 95 | -> | Minus |
arm_3R | 9856076..9856506 | 430..860 | 100 | -> | Minus |
arm_3R | 9856598..9856846 | 181..429 | 100 | -> | Minus |
arm_3R | 9856985..9857150 | 12..180 | 98 | | Minus |
BS05791.5prime Sequence
900 bp (839 high quality bases) assembled on 2005-12-03
> BS05791.5prime
GAAGTTATCAGTCGACATGATCGGAATATATTTGCTGATCGCTGCAGTCA
CGCTGCTATATGTCTATCTCAAGTGGACATTTAGCTACTGGGATCGCAAG
GGATTCCCATCGACGGGAGTGAGCATACCGTTCGGTGCCCTGGAATCCGT
GACAAAGGGAAAGCGATCCTTCGGTATGGCCATATACGATATGTACAAGT
CGACAAAGGAACCGGTGATCGGTTTGTATCTCACATTGAGACCGGCACTT
CTCGTCCGAGATGCCCAACTGGCCCACGATGTGTTGGTCAAGGATTTTGC
CAGTTTTCACGATCGTGGCGTGTATGTGGATGAAAAGAACGATCCCATGT
CCGCGAGTTTGTTCCAAATGGAAGGAGCCAGCTGGCGGGCCTTGCGCAAC
AAGCTGACGCCCTCATTCACATCCGGCAAACTGAAGGCCATGTTCGAGAC
CTCAGATTCGGTTGGAGACAAGTTGGTGGACAGCATTAGGAAGCAACTGC
CTGCGAACGGCGCCAAGGAGCTGGAACTCAAGAAGCTAATGGCTACATAC
GCCATCGACATTATTGCCACGACTATTTTTGGACTGGATGTTGATAGCTT
TGCGGATCCCAACAACGAATTCCAGATTATTAGCAAAAAAGTGAATCGTA
ACAACATTGAAGATATTATTCGTGGAACATCTAGTTTCCTGTATCCCGGG
CTGGAGAAATTCTTTGTGAAAATCGGCTGGAAACAGGAGGCCACCGAAAG
AATGCGCGAGTTGTCCAATCGAACCGTCGATCTCAGGGAACAGAACAATA
TAGTTCGCAAGGATCTGCTGCAACTTCTGCTGCAGCTGCGGAATCAGGGA
AAGATCAATACCGATGAACATATTTGGTCGGCGGAAAGCACTAAGAATGG
BS05791.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:12:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3050-PB | 1122 | Cyp6d5-RB | 1..884 | 17..900 | 4370 | 99.7 | Plus |
CG3050-PA | 1527 | Cyp6d5-RA | 1..884 | 17..900 | 4370 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:53:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp6d5-RA | 1640 | CG3050-RA | 57..940 | 17..900 | 4390 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:53:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14029284..14029813 | 17..546 | 2650 | 100 | Plus |
3R | 32079331 | 3R | 14030353..14030554 | 699..900 | 980 | 99 | Plus |
3R | 32079331 | 3R | 14030132..14030285 | 547..700 | 770 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 14:53:17 has no hits.
BS05791.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:22:35 Download gff for
BS05791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3050-PA | 1..884 | 17..900 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:55:12 Download gff for
BS05791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3050-PA | 1..884 | 17..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:02:26 Download gff for
BS05791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp6d5-RA | 45..940 | 6..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:10:29 Download gff for
BS05791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp6d5-RA | 45..940 | 6..900 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:10:29 Download gff for
BS05791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14029272..14029813 | 6..546 | 99 | -> | Plus |
3R | 14030132..14030284 | 547..699 | 100 | -> | Plus |
3R | 14030354..14030554 | 700..900 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:02:26 Download gff for
BS05791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9855854..9856006 | 547..699 | 100 | -> | Plus |
arm_3R | 9854994..9855535 | 6..546 | 99 | -> | Plus |
arm_3R | 9856076..9856276 | 700..900 | 99 | | Plus |
BS05791.complete Sequence
1559 bp (1559 high quality bases) assembled on 2005-10-19
GenBank Submission: FJ635236
> BS05791.complete
GAAGTTATCAGTCGACATGATCGGAATATATTTGCTGATCGCTGCAGTCA
CGCTGCTATATGTCTATCTCAAGTGGACATTTAGCTACTGGGATCGCAAG
GGATTCCCATCGACGGGAGTGAGCATACCGTTCGGTGCCCTGGAATCCGT
GACAAAGGGAAAGCGATCCTTCGGTATGGCCATATACGATATGTACAAGT
CGACAAAGGAACCGGTGATCGGTTTGTATCTCACATTGAGACCGGCACTT
CTCGTCCGAGATGCCCAACTGGCCCACGATGTGTTGGTCAAGGATTTTGC
CAGTTTTCACGATCGTGGCGTGTATGTGGATGAAAAGAACGATCCCATGT
CCGCGAGTTTGTTCCAAATGGAAGGAGCCAGCTGGCGGGCCTTGCGCAAC
AAGCTGACGCCCTCATTCACATCCGGCAAACTGAAGGCCATGTTCGAGAC
CTCAGATTCGGTTGGAGACAAGTTGGTGGACAGCATTAGGAAGCAACTGC
CTGCGAACGGCGCCAAGGAGCTGGAACTCAAGAAGCTAATGGCTACATAC
GCCATCGACATTATTGCCACGACTATTTTTGGACTGGATGTTGATAGCTT
TGCGGATCCCAACAACGAATTCCAGATTATTAGCAAAAAAGTGAATCGTA
ACAACATTGAAGATATTATTCGTGGAACATCTAGTTTCCTGTATCCCGGG
CTGGAGAAATTCTTTGTGAAAATCGGCTGGAAACAGGAGGCCACCGAAAG
AATGCGCGAGTTGTCCAATCGAACCGTCGATCTCAGGGAACAGAACAATA
TAGTTCGCAAGGATCTGCTGCAACTTCTGCTGCAGCTGCGGAATCAGGGA
AAGATCAATACCGATGACAATATTTGGTCGGCGGAAAGCACTAAGAATGG
TGTTAAGTCCATGTCCAAGGACTTGATTGCCGGCCAGCTATTCCTCTTCT
ATGTTGCCGGTTATGAGACGACAGCTTCTACAACATCCTTTACCCTATAC
GAGCTAACCCAAAATCCTGAAGTGATGGAAAAGGCTAAGGAGGATGTTCG
CAGTGCCATCGAAAAGCATGGCGGAAAGCTGACATACGACGCCATCTCGG
ACATGAAGTATCTGGAGGCGTGTATACTCGAGACTGCTCGCAAATATCCC
GCTCTGCCACTGCTGAATAGAATCTGCACCAAGGACTATCCTGTGCCCGA
TAGCAAACTTGTGATCCAAAAGGGTACTCCCATCATAATCTCCCTCATCG
GAATGCACCGCGATGAGGAGTACTTCCCCGATCCGCTTGCCTACAAACCG
GAACGGTATCTGGAGAATGGTAAAGACTACACCCAGGCGGCCTATTTGCC
ATTCGGCGAGGGACCCAGGATGTGTATCGGCGCCCGCATGGGAAAGGTGA
ATGTGAAGATAGCGATTGCCAAGGTTTTGTCGAACTTCGATCTGGAGATC
CGGAAGGAAAAGTGTGAGATTGAGTTCGGCGTGTATGGAATACCGCTGAT
GCCCAAATCAGGTGTTCCCGTGCGTCTGTCTCTCAAAAAGTAGAAGCTTT
CTAGACCAT
BS05791.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:24:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp6d5-RA | 1527 | CG3050-PA | 1..1527 | 17..1543 | 7635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:24:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp6d5-RA | 1640 | CG3050-RA | 57..1583 | 17..1543 | 7635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:24:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14029284..14029813 | 17..546 | 2650 | 100 | Plus |
3R | 32079331 | 3R | 14030353..14030784 | 699..1130 | 2160 | 100 | Plus |
3R | 32079331 | 3R | 14030875..14031125 | 1130..1380 | 1255 | 100 | Plus |
3R | 32079331 | 3R | 14031262..14031426 | 1379..1543 | 825 | 100 | Plus |
3R | 32079331 | 3R | 14030132..14030285 | 547..700 | 770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:24:07 has no hits.
BS05791.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:23:44 Download gff for
BS05791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp6d5-RA | 1..1527 | 17..1543 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:05:37 Download gff for
BS05791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp6d5-RA | 43..1583 | 6..1548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:08:13 Download gff for
BS05791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp6d5-RA | 57..1583 | 17..1543 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:23:44 Download gff for
BS05791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp6d5-RA | 43..1583 | 6..1548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:20:47 Download gff for
BS05791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp6d5-RA | 57..1583 | 17..1543 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:20:47 Download gff for
BS05791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14030132..14030284 | 547..699 | 100 | -> | Plus |
3R | 14029284..14029813 | 17..546 | 100 | -> | Plus |
3R | 14030354..14030784 | 700..1130 | 100 | -> | Plus |
3R | 14030876..14031124 | 1131..1379 | 100 | -> | Plus |
3R | 14031263..14031426 | 1380..1543 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:08:13 Download gff for
BS05791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9855006..9855535 | 17..546 | 100 | -> | Plus |
arm_3R | 9855854..9856006 | 547..699 | 100 | -> | Plus |
arm_3R | 9856076..9856506 | 700..1130 | 100 | -> | Plus |
arm_3R | 9856598..9856846 | 1131..1379 | 100 | -> | Plus |
arm_3R | 9856985..9857148 | 1380..1543 | 100 | | Plus |
BS05791.pep Sequence
Translation from 16 to 1542
> BS05791.pep
MIGIYLLIAAVTLLYVYLKWTFSYWDRKGFPSTGVSIPFGALESVTKGKR
SFGMAIYDMYKSTKEPVIGLYLTLRPALLVRDAQLAHDVLVKDFASFHDR
GVYVDEKNDPMSASLFQMEGASWRALRNKLTPSFTSGKLKAMFETSDSVG
DKLVDSIRKQLPANGAKELELKKLMATYAIDIIATTIFGLDVDSFADPNN
EFQIISKKVNRNNIEDIIRGTSSFLYPGLEKFFVKIGWKQEATERMRELS
NRTVDLREQNNIVRKDLLQLLLQLRNQGKINTDDNIWSAESTKNGVKSMS
KDLIAGQLFLFYVAGYETTASTTSFTLYELTQNPEVMEKAKEDVRSAIEK
HGGKLTYDAISDMKYLEACILETARKYPALPLLNRICTKDYPVPDSKLVI
QKGTPIIISLIGMHRDEEYFPDPLAYKPERYLENGKDYTQAAYLPFGEGP
RMCIGARMGKVNVKIAIAKVLSNFDLEIRKEKCEIEFGVYGIPLMPKSGV
PVRLSLKK*
BS05791.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:32:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp6d5-PA | 508 | CG3050-PA | 1..508 | 1..508 | 2607 | 100 | Plus |
Cyp6d4-PA | 515 | CG12800-PA | 5..508 | 4..505 | 1388 | 51.7 | Plus |
Cyp6d2-PA | 512 | CG4373-PA | 4..512 | 4..508 | 1290 | 49 | Plus |
Cyp6a2-PA | 506 | CG9438-PA | 5..476 | 4..478 | 818 | 35.8 | Plus |
Cyp6a13-PA | 493 | CG2397-PA | 1..487 | 1..504 | 782 | 33.9 | Plus |