Clone Sequence Records
BS05807.3prime Sequence
913 bp (848 high quality bases) assembled on 2005-12-03
> BS05807.3prime
ATGGTCTAGAAAGCTTCTACAAGCCCTCCTCGGATGTGGGCAGCCAAAAA
GCCATGTTGGTGCACGCGGACGCCAGCATCATGTATTTTGGATTGAACTG
AACGCATTGCACCGGTCCCGGATGGTCACCATTCAGTACGGACACCTTAT
TGCCAGTGTCGGCATTCCAGATGTGCACTCGTCCATCGGTGCTGCCTGAA
AAGATGAACTGCGAGTCTGGGCTGAAGCTTGCCTCGATGGGAATGCCCTT
GTTGTTTGGATAGCCCGTGAACGTTTGTAGCGGAGTGCCGTGGAAGGCAT
CTACGAGCCGGATGACCGATCCATTCGTGCTGATCAGAATTGTTTTGCCG
TCACGGGAGAACTTAAGGCCAGTCCAGTCGCATTCCTTCTCCTGATTAAG
TTTAAATGTGACGAAGGGGCCTTTGTCGAAAGAGCGAAGGTCGTACAATT
TAATGCTTTCCGAGTTAACGCCAGCGGCGAAGATCAAGCCCTCGGGATCG
TAGGCAGCAATGGGTCGTCCAGAGAGATGCATCAGTCCCTGGCAGTTGGG
CGAGCGCAAGTCCCACAGGCGCAGCGTCTTGTCCAGCGAGCCGGAGAGAA
AGGTGTCCTCCACCGGCGAAATGCACAGCGAGATAACCTTCTTGGTGTGG
CCGGGGAAGTAGCGCAGATATTTGTTGTCGTGCAGGCTGAGATAGCGTAT
GGTGTCGTCCACCTTGGTGGAGCTATGGATGGCCGTGTTGTTGGCGTGCG
TAAAGTGGATTAAATCCACTCCATACTTCTTCGAGTTCACCGTGCGCGAC
TGCGTCCCCTTTTCGCAGTCGTAGATCACGATCTGGTCATCCTCGCTGCA
NGATATTAGATGTTCGCCGTTGGGCGCAAAATCGATGGCGTTGATCTTGT
CCGTGTTCTCTCG
BS05807.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:12:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17293-PA | 954 | CG17293-RA | 58..954 | 913..17 | 4466 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:35:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wdr82-RA | 1089 | CG17293-RA | 124..1020 | 913..17 | 4474 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:35:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8374584..8375480 | 913..17 | 4474 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-02 18:35:20 has no hits.
BS05807.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:22:58 Download gff for
BS05807.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-PA | 58..954 | 17..913 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:55:44 Download gff for
BS05807.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-PA | 58..954 | 17..913 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:11:05 Download gff for
BS05807.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wdr82-RA | 124..1022 | 13..913 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:53:47 Download gff for
BS05807.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wdr82-RA | 124..1022 | 13..913 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 20:53:47 Download gff for
BS05807.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8374584..8375482 | 13..913 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:11:05 Download gff for
BS05807.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8374584..8375482 | 13..913 | 99 | | Minus |
BS05807.5prime Sequence
925 bp (854 high quality bases) assembled on 2005-12-03
> BS05807.5prime
GAAGTTATCAGTCGACATGAAGATAAAACTAATAGATTCGGTGGTGCGCA
GTTTTAAGGTGGCCAAGATCTTCCGAGAGAACACGGACAAGATCAACGCC
ATCGATTTTGCGCCCAACGGCGAACATCTAATATCCTGCAGCGAGGATGA
CCAGATCGTGATCTACGACTGCGAAAAGGGGACGCAGTCGCGCACGGTGA
ACTCGAAGAAGTATGGAGTGGATTTAATCCACTTTACGCACGCCAACAAC
ACGGCCATCCATAGCTCCACCAAGGTGGACGACACCATACGCTATCTCAG
CCTGCACGACAACAAATATCTGCGCTACTTCCCCGGCCACACCAAGAAGG
TTATCTCGCTGTGCATTTCGCCGGTGGAGGACACCTTTCTCTCCGGCTCG
CTGGACAAGACGCTGCGCCTGTGGGACTTGCGCTCGCCCAACTGCCAGGG
ACTGATGCATCTCTCTGGACGACCCATTGCTGCCTACGATCCCGAGGGCT
TGATCTTCGCCGCTGGCGTTAACTCGGAAAGCATTAAATTGTACGACCTT
CGCTCTTTCGACAAAGGCCCCTTCGTCACATTTAAACTTAATCAGGAGAA
GGAATGCGACTGGACTGGCCTTAAGTTCTCCCGTGACGGCAAAACAATTC
TGATCAGCACGAATGGATCGGTCATCCGGCTCGTAGATGCCTTCCACGGC
ACTCCGCTACAAACGTTCACGGGCTATCCAAACAACAAGGGCATTCCCAT
CGAGGCAAGCTTCAGCCCAGACTCGCAGTTCATCTTTTCAGGCAGCACCG
ATGGACGAGTGCACATCTGGAATGCCGACACTGGCAATAAGGTGTCCGTA
CTGAATGGTGACCATCCGGGACCGGTGNCATGCGTTCAGTTCAATCCAAA
ATACATGATGCTGGCGTCCGCGTGC
BS05807.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:12:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17293-PA | 954 | CG17293-RA | 1..909 | 17..925 | 4501 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:45:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wdr82-RA | 1089 | CG17293-RA | 67..975 | 17..925 | 4519 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:45:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8374527..8375435 | 17..925 | 4519 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-13 08:45:22 has no hits.
BS05807.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:22:59 Download gff for
BS05807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-PA | 1..909 | 17..925 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:55:45 Download gff for
BS05807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-PA | 1..909 | 17..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:21:15 Download gff for
BS05807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wdr82-RA | 58..975 | 9..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:40:49 Download gff for
BS05807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wdr82-RA | 58..975 | 9..925 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:40:49 Download gff for
BS05807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8374518..8375435 | 9..925 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:21:15 Download gff for
BS05807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8374518..8375435 | 9..925 | 99 | | Plus |
BS05807.complete Sequence
986 bp (986 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ635238
> BS05807.complete
GAAGTTATCAGTCGACATGAAGATAAAACTAATAGATTCGGTGGTGCGCA
GTTTTAAGGTGGCCAAGATCTTCCGAGAGAACACGGACAAGATCAACGCC
ATCGATTTTGCGCCCAACGGCGAACATCTAATATCCTGCAGCGAGGATGA
CCAGATCGTGATCTACGACTGCGAAAAGGGGACGCAGTCGCGCACGGTGA
ACTCGAAGAAGTATGGAGTGGATTTAATCCACTTTACGCACGCCAACAAC
ACGGCCATCCATAGCTCCACCAAGGTGGACGACACCATACGCTATCTCAG
CCTGCACGACAACAAATATCTGCGCTACTTCCCCGGCCACACCAAGAAGG
TTATCTCGCTGTGCATTTCGCCGGTGGAGGACACCTTTCTCTCCGGCTCG
CTGGACAAGACGCTGCGCCTGTGGGACTTGCGCTCGCCCAACTGCCAGGG
ACTGATGCATCTCTCTGGACGACCCATTGCTGCCTACGATCCCGAGGGCT
TGATCTTCGCCGCTGGCGTTAACTCGGAAAGCATTAAATTGTACGACCTT
CGCTCTTTCGACAAAGGCCCCTTCGTCACATTTAAACTTAATCAGGAGAA
GGAATGCGACTGGACTGGCCTTAAGTTCTCCCGTGACGGCAAAACAATTC
TGATCAGCACGAATGGATCGGTCATCCGGCTCGTAGATGCCTTCCACGGC
ACTCCGCTACAAACGTTCACGGGCTATCCAAACAACAAGGGCATTCCCAT
CGAGGCAAGCTTCAGCCCAGACTCGCAGTTCATCTTTTCAGGCAGCACCG
ATGGACGAGTGCACATCTGGAATGCCGACACTGGCAATAAGGTGTCCGTA
CTGAATGGTGACCATCCGGGACCGGTGCAATGCGTTCAGTTCAATCCAAA
ATACATGATGCTGGCGTCCGCGTGCACCAACATGGCTTTTTGGCTGCCCA
CATCCGAGGAGGGCTTGTAGAAGCTTTCTAGACCAT
BS05807.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:31:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wdr82-RA | 954 | CG17293-PA | 1..954 | 17..970 | 4770 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:31:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wdr82-RA | 1089 | CG17293-RA | 67..1020 | 17..970 | 4770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:31:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8374527..8375480 | 17..970 | 4770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:31:03 has no hits.
BS05807.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:22:04 Download gff for
BS05807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-RA | 1..954 | 17..970 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:03:38 Download gff for
BS05807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-RA | 38..1002 | 9..974 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:19 Download gff for
BS05807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wdr82-RA | 67..1020 | 17..970 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:22:05 Download gff for
BS05807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-RA | 38..1002 | 9..974 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:13:27 Download gff for
BS05807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wdr82-RA | 67..1020 | 17..970 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:13:27 Download gff for
BS05807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8374527..8375480 | 17..970 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:19 Download gff for
BS05807.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8374527..8375480 | 17..970 | 100 | | Plus |
BS05807.pep Sequence
Translation from 16 to 969
> BS05807.pep
MKIKLIDSVVRSFKVAKIFRENTDKINAIDFAPNGEHLISCSEDDQIVIY
DCEKGTQSRTVNSKKYGVDLIHFTHANNTAIHSSTKVDDTIRYLSLHDNK
YLRYFPGHTKKVISLCISPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLS
GRPIAAYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQEKECDWT
GLKFSRDGKTILISTNGSVIRLVDAFHGTPLQTFTGYPNNKGIPIEASFS
PDSQFIFSGSTDGRVHIWNADTGNKVSVLNGDHPGPVQCVQFNPKYMMLA
SACTNMAFWLPTSEEGL*
BS05807.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:33:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wdr82-PA | 317 | CG17293-PA | 1..317 | 1..317 | 1685 | 100 | Plus |
| CG3515-PA | 395 | CG3515-PA | 1..311 | 1..311 | 532 | 36.2 | Plus |
| wds-PB | 361 | CG17437-PB | 71..346 | 22..302 | 294 | 29.1 | Plus |
| wds-PA | 361 | CG17437-PA | 71..346 | 22..302 | 294 | 29.1 | Plus |
| CG3436-PC | 347 | CG3436-PC | 57..347 | 25..315 | 204 | 27.2 | Plus |
| wds-PB | 361 | CG17437-PB | 44..268 | 74..309 | 156 | 24 | Plus |
| wds-PA | 361 | CG17437-PA | 44..268 | 74..309 | 156 | 24 | Plus |
