Clone BS05811 Report

Search the DGRC for BS05811

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:58
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG10650-RA
Protein status:BS05811.pep: full length peptide match
Sequenced Size:1310

Clone Sequence Records

BS05811.3prime Sequence

851 bp (758 high quality bases) assembled on 2005-12-03

> BS05811.3prime
ATGGTCTAGAAAGCTTTTACAGGGCACTGCGTAGAGCGATCACCACTCCC
GTCAGAAGGCCGACCACGCCCACATTCCTGAGTGCGCCTGCTCCATTGAA
GGGTACCTTGTTGCACTTGCTCTCCGTACACAATTCGCACTGATGGGCCT
CCACTTTGGCATTGCACTGGTACTGCATCAGGTGGCTGGCAGCGGTAAAA
CATCCTCGCACTCCAAGTTCATTCCAGACTCCGCTGTAGCACGTTCCATT
GGGGCAGTTGATCAAAGGGAGCGTGTCCGGATATTTGGCCGACCAGCAGC
CGGAAACCTCATTCGAAATGCATGTAATGCACTGGAACTCGCCGGCAGCC
ACATTGCAGCCATTTTCGGAGCAGGAAGTGCAGGCATTGGTTGTAGAGCA
GCCAGCCTCCAAGGTGTTTAGGCACCCTCGGGTAACATTGGTTCCTGAGG
TCATGGTATAACACCCGACTTCCTGGTTGTACTTGGCCTGTCCGCAGGAC
TTCGCATTGGTAGCAACCTGTTGCTCCGCACAGTTCTCGCAAATGATACA
GGAACCGGCCTCTCGTTCGTAGGTCGGACTATTGCAAAAGTCGGAGTTGC
AGACGAGGCAACTGGGATCAGTGCTGTCCGACGCACACTTGATTTCCGTG
GTGGCCGATGTGCAACCACGGGTCATGTTGCTCGCAGACGTTCCGGTGGT
GAAGCACCCGGCATCGATTTGACTACATCCCGCGACCAAGGTATTTGAGA
CCGCATTGCAGTTCTCTCCTGAGCAATTATAGCACTGGCGACGATTGGCG
GGGAATAGTCCCACATTGCACAGGGATGCCAAGCATGAAGAGCACGTGAA
T

BS05811.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:12:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG10650-PA 1278 CG10650-RA 447..1278 848..17 4110 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 15:15:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG10650-RB 1784 CG10650-RB 527..1358 848..17 4130 99.8 Minus
CG10650-RA 1527 CG10650-RA 527..1358 848..17 4130 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 15:15:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18994137..18994762 223..848 3100 99.7 Plus
2L 23513712 2L 18993786..18993991 17..222 1030 100 Plus
Blast to na_te.dros performed on 2015-01-30 15:15:55 has no hits.

BS05811.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:23:06 Download gff for BS05811.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10650-PA 444..1278 17..851 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:55:55 Download gff for BS05811.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10650-PA 444..1278 17..851 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:11:34 Download gff for BS05811.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10650-RA 524..1358 17..851 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:41:02 Download gff for BS05811.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10650-RA 524..1358 17..851 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:41:02 Download gff for BS05811.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 18993786..18993991 17..222 100 <- Plus
2L 18994137..18994765 223..851 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:11:34 Download gff for BS05811.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18993786..18993991 17..222 100 <- Plus
arm_2L 18994137..18994765 223..851 99   Plus

BS05811.5prime Sequence

866 bp (864 high quality bases) assembled on 2005-12-03

> BS05811.5prime
GAAGTTATCAGTCGACATGAGAGAATACAGCCTATGTATGATTGTGATAG
CAGCTTTCATTGCCAGCCAGCTGGACAGCACCTCAGCCCTCCAGTGCTAT
TCGTGCACATCGACGACGAATGACACTGGAAATTGTTTAACGAGTCCATC
TACTCAAACTTCTATAGAGTGTGATAATGAATGCTATACTCTTATTAACG
CAGGAACTCTAACTCGTGGCTGCTTGATTAATGGCACTGCGTGCACCTTA
CCATCCTGCTCGACCTGCAAGGAAGACAATTGCAATTTGAATTTGGTGTG
CCAGCAGTGCCTCGGCGAAGCGAATTGCGCCACGACCAACGTGACGGATA
CGCAATACAATGCAGTGTGCCCCAATAATGGACAGGTCTGCGTGAATCAG
TTGAATGACAACAAGACGGTGACCCGTCAATGTGGTGACCCCTGTGCTGC
TGGAACGGAATCCACGTGCTCCTCATGCTCGGCATCCCTGTGCAATGTGG
GACTATTCCCCGCCAATCGTCGCCAGTGCTATAATTGCTCAGGAGAGAAC
TGCAATGCGGTCTCAAATACCTTGGTCGCGGGATGTAGTCAAATCGATGC
CGGGTGCTTCACCACCGGAACGTCTGCGAGCAACATGACCCGTGGTTGCA
CATCGGCCACCACGGAAATCAAGTGTGCGTCGGACAGCACTGATCCCAGT
TGCCTCGTCTGCAACTCCGACTTTTGCAATAGTCCGACCTACGAACGAGA
GGCCGGTTCCTGTATCATTTGCGAGAACTGTGCGGAGCAACAGGTTGCTA
CCAATGCGAAGTCCTGCGGACAGGCCAAGTACAACCAGGAAGTCGGGTGT
TATACCATGACCTCAG

BS05811.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:12:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG10650-PA 1278 CG10650-RA 1..850 17..866 4225 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:55:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG10650-RB 1784 CG10650-RB 80..930 16..866 4240 99.9 Plus
CG10650-RA 1527 CG10650-RA 80..930 16..866 4240 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:54:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18994359..18995023 866..202 3325 100 Minus
2L 23513712 2L 18995601..18995712 204..93 560 100 Minus
2L 23513712 2L 18995779..18995855 92..16 370 98.7 Minus
Blast to na_te.dros performed on 2015-02-11 14:55:00 has no hits.

BS05811.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:23:07 Download gff for BS05811.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10650-PA 1..850 17..866 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:55:56 Download gff for BS05811.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10650-PA 1..850 17..866 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:03:04 Download gff for BS05811.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10650-RA 75..930 10..866 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:11:04 Download gff for BS05811.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10650-RA 75..930 10..866 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:11:04 Download gff for BS05811.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18994359..18995021 204..866 100 <- Minus
2L 18995602..18995712 93..203 100 <- Minus
2L 18995779..18995858 10..92 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:03:04 Download gff for BS05811.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18994359..18995021 204..866 100 <- Minus
arm_2L 18995602..18995712 93..203 100 <- Minus
arm_2L 18995779..18995858 10..92 95   Minus

BS05811.complete Sequence

1310 bp assembled on 2009-02-12

> BS05811.complete
GAAGTTATCAGTCGACATGAGAGAATACAGCCTATGTATGATTGTGATAG
CAGCTTTCATTGCCAGCCAGCTGGACAGCACCTCAGCCCTCCAGTGCTAT
TCGTGCACATCGACGACGAATGACACTGGAAATTGTTTAACGAGTCCATC
TACTCAAACTTCTATAGAGTGTGATAATGAATGCTATACTCTTATTAACG
CAGGAACTCTAACTCGTGGCTGCTTGATTAATGGCACTGCGTGCACCTTA
CCATCCTGCTCGACCTGCAAGGAAGACAATTGCAATTTGAATTTGGTGTG
CCAGCAGTGCCTCGGCGAAGCGAATTGCGCCACGACCAACGTGACGGATA
CGCAATACAATGCAGTGTGCCCCAATAATGGACAGGTCTGCGTGAATCAG
TTGAATGACAACAAGACGGTGACCCGTCAATGTGGTGACCCCTGTGCTGC
TGGAACGGAATCCACGTGCTCCTCATGCTCGGCATCCCTGTGCAATGTGG
GACTATTCCCCGCCAATCGTCGCCAGTGCTATAATTGCTCAGGAGAGAAC
TGCAATGCGGTCTCAAATACCTTGGTCGCGGGATGTAGTCAAATCGATGC
CGGGTGCTTCACCACCGGAACGTCTGCGAGCAACATGACCCGTGGTTGCA
CATCGGCCACCACGGAAATCAAGTGTGCGTCGGACAGCACTGATCCCAGT
TGCCTCGTCTGCAACTCCGACTTTTGCAATAGTCCGACCTACGAACGAGA
GGCCGGTTCCTGTATCATTTGCGAGAACTGTGCGGAGCAACAGGTTGCTA
CCAATGCGAAGTCCTGCGGACAGGCCAAGTACAACCAGGAAGTCGGGTGT
TATACCATGACCTCAGGAACCAATGTTACCCGAGGGTGCCTAAACACCTT
GGAGGCTGGCTGCTCTACAACCAATGCCTGCACTTCCTGCTCCGAAAATG
GCTGCAATGTGGCTGCCGGCGAGTTCCAGTGCATTACATGCATTTCGAAT
GAGGTTTCCGGCTGCTGGTCGGCCAAATATCCGGACACGCTCCCTTTGAT
CAACTGCCCCAATGGAACGTGCTACAGCGGAGTCTGGAATGAACTTGGAG
TGCGAGGATGTTTTACCGCTGCCAGCCACCTGATGCAGTACCAGTGCAAT
GCCAAAGTGGAGGCCCATCAGTGCGAATTGTGTACGGAGAGCAAGTGCAA
CAAGGTACCCTTCAATGGAGCAGGCGCACTCAGGAATGTGGGCGTGGTCG
GCCTTCTGACGGGAGTGGTGATCGCTCTACGCAGTGCCCTGTAAAAGCTT
TCTAGACCAT

BS05811.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG10650-RB 1278 CG10650-PB 1..1278 17..1294 6375 99.9 Plus
CG10650-RA 1278 CG10650-PA 1..1278 17..1294 6375 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG10650-RB 1784 CG10650-RB 80..1358 16..1294 6380 99.9 Plus
CG10650-RA 1527 CG10650-RA 80..1358 16..1294 6380 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18994137..18995023 1088..202 4435 100 Minus
2L 23513712 2L 18993786..18993991 1294..1089 1030 100 Minus
2L 23513712 2L 18995601..18995712 204..93 560 100 Minus
2L 23513712 2L 18995779..18995855 92..16 370 98.7 Minus
Blast to na_te.dros performed on 2014-11-26 15:40:28 has no hits.

BS05811.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-12 18:08:36 Download gff for BS05811.complete
Subject Subject Range Query Range Percent Splice Strand
CG10650-RA 77..1352 17..1292 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:41:34 Download gff for BS05811.complete
Subject Subject Range Query Range Percent Splice Strand
CG10650-RA 81..1356 17..1292 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:12 Download gff for BS05811.complete
Subject Subject Range Query Range Percent Splice Strand
CG10650-RA 81..1356 17..1292 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:12 Download gff for BS05811.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18995602..18995712 93..203 100 <- Minus
2L 18995779..18995854 17..92 98   Minus
2L 18993788..18993991 1089..1292 100 <- Minus
2L 18994137..18995021 204..1088 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:41:34 Download gff for BS05811.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18993788..18993991 1089..1292 100 <- Minus
arm_2L 18994137..18995021 204..1088 100 <- Minus
arm_2L 18995602..18995712 93..203 100 <- Minus
arm_2L 18995779..18995854 17..92 98   Minus

BS05811.pep Sequence

Translation from 16 to 1293

> BS05811.pep
MREYSLCMIVIAAFIASQLDSTSALQCYSCTSTTNDTGNCLTSPSTQTSI
ECDNECYTLINAGTLTRGCLINGTACTLPSCSTCKEDNCNLNLVCQQCLG
EANCATTNVTDTQYNAVCPNNGQVCVNQLNDNKTVTRQCGDPCAAGTEST
CSSCSASLCNVGLFPANRRQCYNCSGENCNAVSNTLVAGCSQIDAGCFTT
GTSASNMTRGCTSATTEIKCASDSTDPSCLVCNSDFCNSPTYEREAGSCI
ICENCAEQQVATNAKSCGQAKYNQEVGCYTMTSGTNVTRGCLNTLEAGCS
TTNACTSCSENGCNVAAGEFQCITCISNEVSGCWSAKYPDTLPLINCPNG
TCYSGVWNELGVRGCFTAASHLMQYQCNAKVEAHQCELCTESKCNKVPFN
GAGALRNVGVVGLLTGVVIALRSAL*

BS05811.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG10650-PB 425 CG10650-PB 1..425 1..425 2339 100 Plus
CG10650-PA 425 CG10650-PA 1..425 1..425 2339 100 Plus
CG13492-PD 2979 CG13492-PD 2134..2536 25..397 268 25.9 Plus
CG13492-PD 2979 CG13492-PD 1291..1703 25..403 266 25.1 Plus
CG13492-PD 2979 CG13492-PD 2414..2790 56..397 252 25.8 Plus
CG13492-PD 2979 CG13492-PD 2555..2965 25..421 245 24.1 Plus
CG13492-PD 2979 CG13492-PD 1963..2372 27..395 233 24.1 Plus
CG13492-PD 2979 CG13492-PD 1202..1613 25..395 227 24.6 Plus
CG13492-PD 2979 CG13492-PD 1716..2116 25..397 222 23.2 Plus
CG13492-PD 2979 CG13492-PD 453..849 25..395 217 24.9 Plus
CG15773-PA 478 CG15773-PA 30..363 92..396 216 25.9 Plus
CG13492-PD 2979 CG13492-PD 866..1273 22..397 212 24.3 Plus
CG15773-PB 319 CG15773-PB 30..315 92..354 211 27.4 Plus
CG15773-PA 478 CG15773-PA 12..445 6..398 200 24.8 Plus
CG13492-PD 2979 CG13492-PD 2628..2947 20..314 193 23 Plus
CG13492-PD 2979 CG13492-PD 108..524 25..395 156 21.5 Plus