Clone BS05824 Report

Search the DGRC for BS05824

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:58
Well:24
Vector:pDNR-Dual
Associated Gene/Transcript7B2-RA
Protein status:BS05824.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05824.3prime Sequence

846 bp (760 high quality bases) assembled on 2005-12-03

> BS05824.3prime
ATGGTCTAGAAAGCTTTTAGTGGAATAAAAGGTTGCCCTTCTTGGCGGCT
ATGGGCAAGCGGTCGCCCTGGAGGAACGGGTTTATGACCGCGTCGTCCAG
CCGAGGATCGGGCATCACAGGATATCCGGCCTTCTTAGCCAGGCTGTTAA
CGTTGTTCAGGCTGTTCTCCTGGCCCATCTGCATGATGTACTGCTCCACG
GCGGAGTTCAGGTCACCCTTGTCGCCGCCCACATCAGCACTATCCTGTTC
CGAGCAGTCGAACATATGCTCGTTGTCGCAGGTACAGTCCTGAGCGGCCT
GGAACTCCCGGCTGAAGATGGCCGTGTTTTCGAAGTCGACAATGCAGCTG
CCGCCTTGCGTCTCCATGTCGTAGCCCTCAGGGCAGGGATTAGGAGGGTT
GCAGTAGGCAGGCAGGCCGGCGTCGTTCTTCACTATAGTGGGATACCTGT
TGGGACCCTCTCCCATTCCGCCGGAGATGAACTGGTGACCCCACAGCGAA
CTGTGCTGCAGAAACTCGTCATCCCGCAGCGAAGGATGGGAGGCAGCTCC
CGATGCCGAGCCCGATTGCAGGATGCAGTCGCTTCCGCCGTCACACAGCC
TCGCGTACTCCGACCGGGAGACCAGGTCCACGTTGTCCTTGGAGCCAGCG
GCTGCCTCGTTGCCCACGTCGTAATAGCCCACCTGCATGTCTTTGTCCAT
GCGATTCAGCAGATCCGTCATCAAGACATCGGCAAGAATATCCTTGGCGC
TATAGGACTGCACCTGGTAGCCACTCAAGGCGACCACGAGCATCGCCACC
ATCATGTACACACTTTTGCGACGGGACAACATGTCGACTGATAACT

BS05824.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:13:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG1168-PA 816 7B2-RA 17..816 816..17 4000 100 Minus
CG1168-PB 831 7B2-RB 35..831 813..17 3985 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:30:11
Subject Length Description Subject Range Query Range Score Percent Strand
7B2-RA 1133 CG1168-RA 153..968 832..17 4020 99.6 Minus
7B2-RB 1148 CG1168-RB 187..983 813..17 3985 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:30:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5377014..5377810 813..17 3985 100 Minus
Blast to na_te.dros performed on 2015-02-02 18:30:07 has no hits.

BS05824.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:23:30 Download gff for BS05824.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1168-PA 1..816 17..832 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:56:26 Download gff for BS05824.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1168-PA 1..816 17..832 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:10:40 Download gff for BS05824.3prime
Subject Subject Range Query Range Percent Splice Strand
7B2-RA 179..994 17..832 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:53:12 Download gff for BS05824.3prime
Subject Subject Range Query Range Percent Splice Strand
7B2-RA 153..968 17..832 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 20:53:12 Download gff for BS05824.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 5377009..5377810 17..821 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:10:40 Download gff for BS05824.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1202731..1203532 17..821 99   Minus

BS05824.5prime Sequence

713 bp (712 high quality bases) assembled on 2005-12-03

> BS05824.5prime
GAAGTTATCAGTCGACATGTTGTTCCGTTCGCAAAGTGTGTACATGATGG
TGGCGATGCTCGTGGTCGCCTTGAGTGGCTACCAGGTGCAGTCCTATAGC
GCCAAGGATATTCTTGCCGATGTCTTGATGACGGATCTGCTGAATCGCAT
GGACAAAGACATGCAGGTGGGCTATTACGACGTGGGCAACGAGGCAGCCG
CTGGCTCCAAGGACAACGTGGACCTGGTCTCCCGGTCGGAGTACGCGAGG
CTGTGTGACGGCGGAAGCGACTGCATCCTGCAATCGGGCTCGGCATCGGG
AGCTGCCTCCCATCCTTCGCTGCGGGATGACGAGTTTCTGCAGCACAGTT
CGCTGTGGGGTCACCAGTTCATCTCCGGCGGAATGGGAGAGGGTCCCAAC
AGGTATCCCACTATAGTGAAGAACGACGCCGGCCTGCCTGCCTACTGCAA
CCCTCCTAATCCCTGCCCTGAGGGCTACGACATGGAGACGCAAGGCGGCA
GCTGCATTGTCGACTTCGAAAACACGGCCATCTTCAGCCGGGAGTTCCAG
GCCGCTCAGGACTGTACCTGCGACAACGAGCATATGTTCGACTGCTCGGA
ACAGGATAGTGCTGATGTGGGCGGCGACAAGGGTGACCTGAACTCCGCCG
TGGAGCAGTACATCATGCAGATGGGCCAGGAGAACAGCCTGAACAACGTT
AACAGCCTGGCTA

BS05824.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:13:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG1168-PA 816 7B2-RA 1..697 17..713 3485 100 Plus
CG1168-PB 831 7B2-RB 35..712 36..713 3390 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 11:48:38
Subject Length Description Subject Range Query Range Score Percent Strand
7B2-RA 1133 CG1168-RA 153..849 17..713 3485 100 Plus
7B2-RB 1148 CG1168-RB 187..864 36..713 3390 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 11:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5377014..5377691 36..713 3390 100 Plus
Blast to na_te.dros performed on 2015-02-02 11:48:35 has no hits.

BS05824.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:23:31 Download gff for BS05824.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1168-PA 1..696 17..712 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:56:28 Download gff for BS05824.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1168-PA 1..696 17..712 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 06:42:52 Download gff for BS05824.5prime
Subject Subject Range Query Range Percent Splice Strand
7B2-RA 171..874 7..712 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:50:07 Download gff for BS05824.5prime
Subject Subject Range Query Range Percent Splice Strand
7B2-RA 145..848 7..712 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:50:07 Download gff for BS05824.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5377014..5377690 36..712 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 06:42:52 Download gff for BS05824.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1202736..1203412 36..712 100   Plus

BS05824.complete Sequence

848 bp (848 high quality bases) assembled on 2005-10-27

> BS05824.complete
GAAGTTATCAGTCGACATGTTGTTCCGTTCGCAAAGTGTGTACATGATGG
TGGCGATGCTCGTGGTCGCCTTGAGTGGCTACCAGGTGCAGTCCTATAGC
GCCAAGGATATTCTTGCCGATGTCTTGATGACGGATCTGCTGAATCGCAT
GGACAAAGACATGCAGGTGGGCTATTACGACGTGGGCAACGAGGCAGCCG
CTGGCTCCAAGGACAACGTGGACCTGGTCTCCCGGTCGGAGTACGCGAGG
CTGTGTGACGGCGGAAGCGACTGCATCCTGCAATCGGGCTCGGCATCGGG
AGCTGCCTCCCATCCTTCGCTGCGGGATGACGAGTTTCTGCAGCACAGTT
CGCTGTGGGGTCACCAGTTCATCTCCGGCGGAATGGGAGAGGGTCCCAAC
AGGTATCCCACTATAGTGAAGAACGACGCCGGCCTGCCTGCCTACTGCAA
CCCTCCTAATCCCTGCCCTGAGGGCTACGACATGGAGACGCAAGGCGGCA
GCTGCATTGTCGACTTCGAAAACACGGCCATCTTCAGCCGGGAGTTCCAG
GCCGCTCAGGACTGTACCTGCGACAACGAGCATATGTTCGACTGCTCGGA
ACAGGATAGTGCTGATGTGGGCGGCGACAAGGGTGACCTGAACTCCGCCG
TGGAGCAGTACATCATGCAGATGGGCCAGGAGAACAGCCTGAACAACGTT
AACAGCCTGGCTAAGAAGGCCGGATATCCTGTGATGCCCGATCCTCGGCT
GGACGACGCGGTCATAAACCCGTTCCTCCAGGGCGACCGCTTGCCCATAG
CCGCCAAGAAGGGCAACCTTTTATTCCACTAAAAGCTTTCTAGACCAT

BS05824.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:32:30
Subject Length Description Subject Range Query Range Score Percent Strand
7B2-RA 816 CG1168-PA 1..816 17..832 4080 100 Plus
7B2-RB 831 CG1168-PB 35..831 36..832 3985 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:32:31
Subject Length Description Subject Range Query Range Score Percent Strand
7B2-RA 1133 CG1168-RA 153..968 17..832 4080 100 Plus
7B2-RB 1148 CG1168-RB 187..983 36..832 3985 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:32:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5377014..5377810 36..832 3985 100 Plus
Blast to na_te.dros performed on 2014-11-27 10:32:29 has no hits.

BS05824.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:22:00 Download gff for BS05824.complete
Subject Subject Range Query Range Percent Splice Strand
7B2-RA 1..816 17..832 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:03:31 Download gff for BS05824.complete
Subject Subject Range Query Range Percent Splice Strand
7B2-RA 171..994 7..832 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:41 Download gff for BS05824.complete
Subject Subject Range Query Range Percent Splice Strand
7B2-RA 184..992 22..830 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:22:00 Download gff for BS05824.complete
Subject Subject Range Query Range Percent Splice Strand
7B2-RA 171..994 7..832 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:24:35 Download gff for BS05824.complete
Subject Subject Range Query Range Percent Splice Strand
7B2-RA 158..966 22..830 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:24:35 Download gff for BS05824.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5377014..5377808 36..830 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:41 Download gff for BS05824.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1202736..1203530 36..830 100   Plus

BS05824.pep Sequence

Translation from 16 to 831

> BS05824.pep
MLFRSQSVYMMVAMLVVALSGYQVQSYSAKDILADVLMTDLLNRMDKDMQ
VGYYDVGNEAAAGSKDNVDLVSRSEYARLCDGGSDCILQSGSASGAASHP
SLRDDEFLQHSSLWGHQFISGGMGEGPNRYPTIVKNDAGLPAYCNPPNPC
PEGYDMETQGGSCIVDFENTAIFSREFQAAQDCTCDNEHMFDCSEQDSAD
VGGDKGDLNSAVEQYIMQMGQENSLNNVNSLAKKAGYPVMPDPRLDDAVI
NPFLQGDRLPIAAKKGNLLFH*

BS05824.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:36
Subject Length Description Subject Range Query Range Score Percent Strand
7B2-PA 271 CG1168-PA 1..271 1..271 1436 100 Plus
7B2-PB 276 CG1168-PB 1..276 1..271 1417 97.8 Plus