Clone BS05835 Report

Search the DGRC for BS05835

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:58
Well:35
Vector:pDNR-Dual
Associated Gene/TranscriptCG32573-RA
Protein status:BS05835.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05835.3prime Sequence

865 bp (791 high quality bases) assembled on 2005-12-03

> BS05835.3prime
ATGGTCTAGAAAGCTTTCATTTTGGCGGAGCACAGGCGATCGGTAGCCAC
TGGCAAGCCTCCGATGGCGGCGTGTGCATCTGGCCGGGCAGCATCTTCAC
CAGACGACGATCGTCGTCGAACTTTTCGGCAGCACAGAGCGTGAGTTCGC
GCTGCCGGAAGATGAGTGCGTCGCCCGCGTAGGCGATGGTCCAGGTGCTG
GTCGAGGAGCTGGGACTGCCGGAGCGCAGGGCGGCCAAGCGATTGCCCTG
GCTGGGATCGACGAAGTAGTACCACTTGAAGAGCTCGCTACGCAGCGTGA
AGAGCGGCGTGGAGTGCTGCTCCTGGACGAAGGCGCGTGTCAGGCCCGCG
GTATCGGTGAAGTTCTTCTCGCGCCAGGAGAACATCTGCCGCCCATTCAG
ACCGTAGTTCCACTCGTCCGTTATGGTCGTGTAGATGTACTCGCGATCGG
AGCGACTCAGCAGGCAGAATCCCTGCGGATCGAAGAGCAAGTCTAGAACG
GGCGGCAGACGTTGGCTCAATGCCTCCACTCGCTTCTGGAGATCCGCATC
GACGCTGGCGTACATGTGATGGCTCCGGATCTTGCTGACCATGTGCGCGA
CGTTGAACAGGTACGCCTCGCTGCTGTCCTGCATGGCCTGATAGCGCCAG
AAGAGCGCCAATTGCGCCTCGATCATCGTGCGAAAGCTGACCTCGTCGCG
ATCCGCGTACAGTTGCTCCAGCTGCTGCACCAGCTTCTCCAGCGGTCGAT
GGAAGTACACGTCCTCGATGGCGTGCACCAGAATGTCCCTGACCAGGGCG
GGCTCCACACTGGCCGCTATGTACATACCGTATGTCTGAATGCTCTCCTC
GGCGTTCAACAGATT

BS05835.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:13:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG32573-PA 1179 CG32573-RA 331..1179 865..17 4220 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:12:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG42512-RA 1782 CG42512-RA 826..1674 865..17 4230 99.9 Minus
CG32573-RC 1332 CG32573-RC 376..1224 865..17 4230 99.9 Minus
CG32573-RA 1782 CG32573-RA 826..1674 865..17 4230 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 17:12:46
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16652319..16653167 865..17 4230 99.9 Minus
Blast to na_te.dros performed on 2015-01-31 17:12:49 has no hits.

BS05835.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:23:48 Download gff for BS05835.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32573-PA 331..1179 17..865 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:56:50 Download gff for BS05835.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32573-PA 331..1179 17..865 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:31:37 Download gff for BS05835.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32573-RA 826..1676 13..865 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:48:08 Download gff for BS05835.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32573-RA 826..1676 13..865 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:48:08 Download gff for BS05835.3prime
Subject Subject Range Query Range Percent Splice Strand
X 16652319..16653169 13..865 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:31:37 Download gff for BS05835.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16546352..16547202 13..865 99   Minus

BS05835.5prime Sequence

953 bp (842 high quality bases) assembled on 2005-12-03

> BS05835.5prime
GAAGTTATCAGTCGACATGATCCAGCTGCTCCAGTTGCTTCTATGTACTA
TTCCACTCGTTGTGGGCGAGGTTCTGCCCCTGCAACTCGATTTGGACAAC
AGTCAAATTACCATACGGCGAAGTGCCAGTCGCGATGACAAATTGCAGGT
ATTCCACAGCATCTGGGGCGCCATTCGCTCCGACTTCGCCACCGATACGG
ACAAGGTGAAGGGCCTGTACAGTCAGCTGGGCGGATATATTCGCGACGAT
GTGCAGTGCAGTAGCGGCTCCACGGGTCGATCTGCCTGCGAGCTGCAGCA
GGAGGTGCGACGCCACCTGCGGACCCTCATGGCCCAGCGGCTGGCCAATC
TGTTGAACGCCGAGGAGAGCATTCAGACATACGGTATGTACATAGCGGCC
AGTGTGGAGCCCGCCCTGGTCAGGGACATTCTGGTGCACGCCATCGAGGA
CGTGTACTTCCATCGACCGCTGGAGAAGCTGGTGCAGCAGCTGGAGCAAC
TGTACGCGGATCGCGACGAGGTCAGCTTTCGCACGATGATCGAGGCGCAA
TTGGCGCTCTTCTGGCGCTATCAGGCCATGCAGGACAGCAGCGAGGCGTA
CCTGTTCAACGTCGCGCACATGGTCAGCAAGATCCGGAGCCATCACATGT
ACGCCAGCGTCGATGCGGATCTCCAGAAGCGAGTGGAGGCATTGAGCCAA
CGTCTGCCGCCCGTTCTAGACTTGCTCTTCGATCCGCAGGGATTCTGCCT
GCTGAGTCGCTCCGATCGCGAGTACATCTACACGACCATAACGGACGAGT
GGAACTACGGTCTGAATGGGCGGCAGATGTTCTCCTGGCGCGAGAAGAAC
TTCACCGATACCGCGGGCCTGACACGCGCCTTCGTCCCAGAGCAGCACTC
CACGCCGCTCTTCACGCTGCGTAGCGAGCTCTTCAAGTGGTACTACTTCG
TCG

BS05835.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:13:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG32573-PA 1179 CG32573-RA 1..937 17..953 4610 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG42512-RA 1782 CG42512-RA 496..1432 17..953 4640 99.7 Plus
CG32573-RC 1332 CG32573-RC 46..982 17..953 4640 99.7 Plus
CG32573-RA 1782 CG32573-RA 496..1432 17..953 4640 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:16:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16652079..16652925 107..953 4190 99.6 Plus
X 23542271 X 16651927..16652016 17..106 450 100 Plus
Blast to na_te.dros performed on 2015-02-12 07:16:32 has no hits.

BS05835.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:23:49 Download gff for BS05835.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32573-PA 1..937 17..953 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:56:51 Download gff for BS05835.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32573-PA 1..937 17..953 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:23:35 Download gff for BS05835.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32573-RA 489..1432 9..953 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:27:54 Download gff for BS05835.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32573-RA 489..1432 9..953 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:27:54 Download gff for BS05835.5prime
Subject Subject Range Query Range Percent Splice Strand
X 16651920..16652016 9..106 96 -> Plus
X 16652079..16652925 107..953 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:23:35 Download gff for BS05835.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16545953..16546049 9..106 96 -> Plus
arm_X 16546112..16546958 107..953 99   Plus

BS05835.complete Sequence

1211 bp (1211 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ635250

> BS05835.complete
GAAGTTATCAGTCGACATGATCCAGCTGCTCCAGTTGCTTCTATGTACTA
TTCCACTCGTTGTGGGCGAGGTTCTGCCCCTGCAACTCGATTTGGACAAC
AGTCAAATTACCATACGGCGAAGTGCCAGTCGCGATGACAAATTGCAGGT
ATTCCACAGCATCTGGGGCGCCATTCGCTCCGACTTCGCCACCGATACGG
ACAAGGTGAAGGGCCTGTACAGTCAGCTGGGCGGATATATTCGCGACGAT
GTGCAGTGCAGTAGCGGCTCCACGGGTCGATCTGCCTGCGAGCTGCAGCA
GGAGGTGCGACGCCACCTGCGGACCCTCATGGCCCAGCGGCTGGCCAATC
TGTTGAACGCCGAGGAGAGCATTCAGACATACGGTATGTACATAGCGGCC
AGTGTGGAGCCCGCCCTGGTCAGGGACATTCTGGTGCACGCCATCGAGGA
CGTGTACTTCCATCGACCGCTGGAGAAGCTGGTGCAGCAGCTGGAGCAAC
TGTACGCGGATCGCGACGAGGTCAGCTTTCGCACGATGATCGAGGCGCAA
TTGGCGCTCTTCTGGCGCTATCAGGCCATGCAGGACAGCAGCGAGGCGTA
CCTGTTCAACGTCGCGCACATGGTCAGCAAGATCCGGAGCCATCACATGT
ACGCCAGCGTCGATGCGGATCTCCAGAAGCGAGTGGAGGCATTGAGCCAA
CGTCTGCCGCCCGTTCTAGACTTGCTCTTCGATCCGCAGGGATTCTGCCT
GCTGAGTCGCTCCGATCGCGAGTACATCTACACGACCATAACGGACGAGT
GGAACTACGGTCTGAATGGGCGGCAGATGTTCTCCTGGCGCGAGAAGAAC
TTCACCGATACCGCGGGCCTGACACGCGCCTTCGTCCAGGAGCAGCACTC
CACGCCGCTCTTCACGCTGCGTAGCGAGCTCTTCAAGTGGTACTACTTCG
TCGATCCCAGCCAGGGCAATCGCTTGGCCGCCCTGCGCTCCGGCAGTCCC
AGCTCCTCGACCAGCACCTGGACCATCGCCTACGCGGGCGACGCACTCAT
CTTCCGGCAGCGCGAACTCACGCTCTGTGCTGCCGAAAAGTTCGACGACG
ATCGTCGTCTGGTGAAGATGCTGCCCGGCCAGATGCACACGCCGCCATCG
GAGGCTTGCCAGTGGCTACCGATCGCCTGTGCTCCGCCAAAATGAAAGCT
TTCTAGACCAT

BS05835.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:38:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG32573-RC 1179 CG32573-PC 1..1179 17..1195 5880 99.9 Plus
CG32573-RA 1179 CG32573-PA 1..1179 17..1195 5880 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:38:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG42512-RA 1782 CG42512-RA 496..1674 17..1195 5880 99.9 Plus
CG32573-RC 1332 CG32573-RC 46..1224 17..1195 5880 99.9 Plus
CG32573-RA 1782 CG32573-RA 496..1674 17..1195 5880 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:38:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16652079..16653167 107..1195 5430 99.9 Plus
X 23542271 X 16651927..16652016 17..106 450 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:38:13 has no hits.

BS05835.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:21:48 Download gff for BS05835.complete
Subject Subject Range Query Range Percent Splice Strand
CG32573-RA 1..1179 17..1195 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:03:13 Download gff for BS05835.complete
Subject Subject Range Query Range Percent Splice Strand
CG32573-RA 489..1676 9..1199 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:20:44 Download gff for BS05835.complete
Subject Subject Range Query Range Percent Splice Strand
CG32573-RA 496..1667 17..1188 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:21:48 Download gff for BS05835.complete
Subject Subject Range Query Range Percent Splice Strand
CG32573-RA 489..1676 9..1199 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:52:25 Download gff for BS05835.complete
Subject Subject Range Query Range Percent Splice Strand
CG32573-RA 496..1667 17..1188 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:52:25 Download gff for BS05835.complete
Subject Subject Range Query Range Percent Splice Strand
X 16651927..16652016 17..106 100 -> Plus
X 16652079..16653160 107..1188 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:20:44 Download gff for BS05835.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16545960..16546049 17..106 100 -> Plus
arm_X 16546112..16547193 107..1188 99   Plus

BS05835.pep Sequence

Translation from 16 to 1194

> BS05835.pep
MIQLLQLLLCTIPLVVGEVLPLQLDLDNSQITIRRSASRDDKLQVFHSIW
GAIRSDFATDTDKVKGLYSQLGGYIRDDVQCSSGSTGRSACELQQEVRRH
LRTLMAQRLANLLNAEESIQTYGMYIAASVEPALVRDILVHAIEDVYFHR
PLEKLVQQLEQLYADRDEVSFRTMIEAQLALFWRYQAMQDSSEAYLFNVA
HMVSKIRSHHMYASVDADLQKRVEALSQRLPPVLDLLFDPQGFCLLSRSD
REYIYTTITDEWNYGLNGRQMFSWREKNFTDTAGLTRAFVQEQHSTPLFT
LRSELFKWYYFVDPSQGNRLAALRSGSPSSSTSTWTIAYAGDALIFRQRE
LTLCAAEKFDDDRRLVKMLPGQMHTPPSEACQWLPIACAPPK*

BS05835.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:34:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG32573-PC 392 CG32573-PC 1..392 1..392 2033 100 Plus
CG32573-PA 392 CG32573-PA 1..392 1..392 2033 100 Plus