Clone Sequence Records
BS05850.5prime Sequence
432 bp (375 high quality bases) assembled on 2005-12-03
> BS05850.5prime
GAAGTTATCAGTCGACATGAGCTACACAAATCTCCTGCGCCATCAGAATG
TGGTCGATGACTGCCAGCGGGTGAGCTGCAACCGCACTCCGCCGATCACT
GTCACCGGGCGCTGTGTGATCAGTCGGGACATCGTGATCGGCTGCCGCAT
GGAACAGTGCGATCCGGACATGCCCTACATGCTGGAGCCGACGTGGGGCG
TCTACCTGCGCCCAGGTCGCGATGGCGGCGACCTGTCGCGGTTCGTGCGG
CGCGTCACCTTCAAGATGTCGCCGCGCCTGCCGCTGCGACTGCACGTGGC
GGACAGCGCTCCGTTTGAGATTGGCGAGGTACTGGGCAGCGACTTTCCCG
TGGAGGTGCAGGTGCAGTATATGGATGCCCGCATGTCGGCCACCTCGTAC
ATCTTCCGGCCGCGCGTGGTGCGCGAGGGTCA
BS05850.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:13:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-PA | 708 | CG2652-RA | 1..416 | 17..432 | 2080 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 11:51:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-RA | 946 | CG2652-RA | 109..524 | 17..432 | 2080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 11:51:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2682409..2682824 | 432..17 | 2080 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-02 11:51:28 has no hits.
BS05850.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:24:17 Download gff for
BS05850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-PA | 1..415 | 17..431 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:57:29 Download gff for
BS05850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-PA | 1..415 | 17..431 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 06:43:17 Download gff for
BS05850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 103..523 | 7..431 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:50:31 Download gff for
BS05850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 103..523 | 7..431 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:50:31 Download gff for
BS05850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2682410..2682830 | 7..431 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 06:43:17 Download gff for
BS05850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2576443..2576863 | 7..431 | 99 | | Minus |
BS05850.3prime Sequence
738 bp (737 high quality bases) assembled on 2005-12-03
> BS05850.3prime
ATGGTCTAGAAAGCTTCTACTGATGACCGATGGGATGGGGTATGCCCACA
CTTAGACGCTTCTTGGGCTGCTTTGCCGGCGGCTGCGAGGGTCGCGCCAC
ATCGCCCACCTGCTCCCGATCCCGGTCCTGTTCCTTTCGCTCACCCGGTG
TCTCCGGCATGGCGGACTCCATTGCAAACTGGGGCGATGTCCTGTCCCCG
GGCGCACCATTTGCACTGGGCACAAGCACGGGCGTTAGATTCTGTCTCAT
CATGGGCGAGGGATTGACGAATATCATCTTGTCGAGCATCTCCTCGCAAA
TACCGGCGTGACCCTCGCGCACCACGCGCGGCCGGAAGATGTACGAGGTG
GCCGACATGCGGGCATCCATATACTGCACCTGCACCTCCACGGGAAAGTC
GCTGCCCAGTACCTCGCCAATCTCAAACGGAGCGCTGTCCGCCACGTGCA
GTCGCAGCGGCAGGCGCGGCGACATCTTGAAGGTGACGCGCCGCACGAAC
CGCGACAGGTCGCCGCCATCGCGACCTGGGCGCAGGTAGACGCCCCACGT
CGGCTCCAGCATGTAGGGCATGTCCGGATCGCACTGTTCCATGCGGCAGC
CGATCACGATGTCCCGACTGATCACACAGCGCCCGGTGACAGTGATCGGC
GGAGTGCGGTTGCAGCTCACCCGCTGGCAGTCATCGACCACATTCTGATG
GCGCAGGAGATTTGTGTAGCTCATGTCGACTGATAACT
BS05850.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:13:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-PA | 708 | CG2652-RA | 1..708 | 724..17 | 3540 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:10:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-RA | 946 | CG2652-RA | 109..816 | 724..17 | 3540 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:10:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2682117..2682824 | 17..724 | 3540 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:10:44 has no hits.
BS05850.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:24:17 Download gff for
BS05850.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-PA | 1..708 | 17..724 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:57:27 Download gff for
BS05850.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-PA | 1..708 | 17..724 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 21:28:54 Download gff for
BS05850.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 103..816 | 17..734 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:06:21 Download gff for
BS05850.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 103..816 | 17..734 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:06:21 Download gff for
BS05850.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2682117..2682830 | 17..734 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 21:28:54 Download gff for
BS05850.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2576150..2576863 | 17..734 | 99 | | Plus |
BS05850.complete Sequence
740 bp (740 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ635261
> BS05850.complete
GAAGTTATCAGTCGACATGAGCTACACAAATCTCCTGCGCCATCAGAATG
TGGTCGATGACTGCCAGCGGGTGAGCTGCAACCGCACTCCGCCGATCACT
GTCACCGGGCGCTGTGTGATCAGTCGGGACATCGTGATCGGCTGCCGCAT
GGAACAGTGCGATCCGGACATGCCCTACATGCTGGAGCCGACGTGGGGCG
TCTACCTGCGCCCAGGTCGCGATGGCGGCGACCTGTCGCGGTTCGTGCGG
CGCGTCACCTTCAAGATGTCGCCGCGCCTGCCGCTGCGACTGCACGTGGC
GGACAGCGCTCCGTTTGAGATTGGCGAGGTACTGGGCAGCGACTTTCCCG
TGGAGGTGCAGGTGCAGTATATGGATGCCCGCATGTCGGCCACCTCGTAC
ATCTTCCGGCCGCGCGTGGTGCGCGAGGGTCACGCCGGTATTTGCGAGGA
GATGCTCGACAAGATGATATTCGTCAATCCCTCGCCCATGATGAGACAGA
ATCTAACGCCCGTGCTTGTGCCCAGTGCAAATGGTGCGCCCGGGGACAGG
ACATCGCCCCAGTTTGCAATGGAGTCCGCCATGCCGGAGACACCGGGTGA
GCGAAAGGAACAGGACCGGGATCGGGAGCAGGTGGGCGATGTGGCGCGAC
CCTCGCAGCCGCCGGCAAAGCAGCCCAAGAAGCGTCTAAGTGTGGGCATA
CCCCATCCCATCGGTCATCAGTAGAAGCTTTCTAGACCAT
BS05850.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:58:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-RA | 708 | CG2652-PA | 1..708 | 17..724 | 3540 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:58:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-RA | 946 | CG2652-RA | 109..816 | 17..724 | 3540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:58:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2682117..2682824 | 724..17 | 3540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:58:30 has no hits.
BS05850.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:21:42 Download gff for
BS05850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 1..708 | 17..724 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:03:05 Download gff for
BS05850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 103..816 | 7..724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:50 Download gff for
BS05850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 109..816 | 17..724 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:21:42 Download gff for
BS05850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 103..816 | 7..724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:32:08 Download gff for
BS05850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 109..816 | 17..724 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:32:08 Download gff for
BS05850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2682117..2682824 | 17..724 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:50 Download gff for
BS05850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2576150..2576857 | 17..724 | 100 | | Minus |
BS05850.pep Sequence
Translation from 16 to 723
> BS05850.pep
MSYTNLLRHQNVVDDCQRVSCNRTPPITVTGRCVISRDIVIGCRMEQCDP
DMPYMLEPTWGVYLRPGRDGGDLSRFVRRVTFKMSPRLPLRLHVADSAPF
EIGEVLGSDFPVEVQVQYMDARMSATSYIFRPRVVREGHAGICEEMLDKM
IFVNPSPMMRQNLTPVLVPSANGAPGDRTSPQFAMESAMPETPGERKEQD
RDREQVGDVARPSQPPAKQPKKRLSVGIPHPIGHQ*
BS05850.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:34:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-PA | 235 | CG2652-PA | 1..235 | 1..235 | 1253 | 100 | Plus |
