Clone BS05863 Report

Search the DGRC for BS05863

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:58
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptRheb-RA
Protein status:BS05863.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05863.3prime Sequence

579 bp (578 high quality bases) assembled on 2005-12-03

> BS05863.3prime
ATGGTCTAGAAAGCTTCTACGATACAAGACAACCGCTCTTCTCCTGGGGA
TTGCCGTTCTCGTTTTCGATGAGGATCAGTAGCTGATGGAATATATCTCC
CACGGACTCGTTCTGTTTGGCGGACGTTTCGAGAAATGCAGCTCGCCAGG
ACTCGGCCAGCTTCTTGCCTTCCTCCGTGGAAACGGTTCGTTCCTGGTGG
AGATCGATCTTGTTGCCGACCAACACCACAGGTACATATTTCTTGCCCAT
TACGTCGAGCAGTTTTTCGTATATGATCTTCACCACCTCAAAAGACTTTT
GGCTGGTTATCGAGTACACCAGGACGTAGCCGTGGTAATCCATGCTGTAC
TGCACCGGGAATATGCTGTACTCGTCCTGGCCCGCCGTGTCGATGAGCTT
TACGATGTAGTCTTGCGACTTTACACGCTCGATCTTGGTGAAGGTGTTCT
CAATGGTGGGGTCATAGGAGTCCACGAACTGGCCCTCCACGAACTGTATG
CATAGCGACGATTTGCCCACTGATCGGTAGCCCATCATGGCTATGTGGCG
CTCCTTGGTTGGCATGTCGACTGATAACT

BS05863.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:13:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG1081-PA 549 Rheb-RA 1..549 565..17 2745 100 Minus
CG1081-PB 549 Rheb-RB 1..549 565..17 2745 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:41:26
Subject Length Description Subject Range Query Range Score Percent Strand
Rheb-RB 1059 CG1081-RB 137..685 565..17 2745 100 Minus
Rheb-RA 1225 CG1081-RA 303..851 565..17 2745 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:41:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5569575..5569782 444..237 1040 100 Minus
3R 32079331 3R 5569842..5569971 236..107 650 100 Minus
3R 32079331 3R 5570026..5570117 108..17 460 100 Minus
3R 32079331 3R 5569399..5569471 517..445 365 100 Minus
3R 32079331 3R 5569223..5569272 565..516 250 100 Minus
Blast to na_te.dros performed 2015-02-12 19:41:24
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 1977..2008 279..248 106 81.2 Minus

BS05863.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:24:41 Download gff for BS05863.3prime
Subject Subject Range Query Range Percent Splice Strand
Rheb-PA 1..549 17..565 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:57:58 Download gff for BS05863.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1081-PB 1..549 17..565 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:01:41 Download gff for BS05863.3prime
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 296..854 13..573 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:12:54 Download gff for BS05863.3prime
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 296..854 13..573 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:12:54 Download gff for BS05863.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 5569575..5569782 237..444 100 -> Minus
3R 5569842..5569971 107..236 100 -> Minus
3R 5570028..5570120 13..106 97   Minus
3R 5569216..5569271 517..573 92 -> Minus
3R 5569400..5569471 445..516 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:01:41 Download gff for BS05863.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1394938..1394993 517..573 92 -> Minus
arm_3R 1395122..1395193 445..516 100 -> Minus
arm_3R 1395297..1395504 237..444 100 -> Minus
arm_3R 1395564..1395693 107..236 100 -> Minus
arm_3R 1395750..1395842 13..106 97   Minus

BS05863.5prime Sequence

579 bp (578 high quality bases) assembled on 2005-12-03

> BS05863.5prime
GAAGTTATCAGTCGACATGCCAACCAAGGAGCGCCACATAGCCATGATGG
GCTACCGATCAGTGGGCAAATCGTCGCTATGCATACAGTTCGTGGAGGGC
CAGTTCGTGGACTCCTATGACCCCACCATTGAGAACACCTTCACCAAGAT
CGAGCGTGTAAAGTCGCAAGACTACATCGTAAAGCTCATCGACACGGCGG
GCCAGGACGAGTACAGCATATTCCCGGTGCAGTACAGCATGGATTACCAC
GGCTACGTCCTGGTGTACTCGATAACCAGCCAAAAGTCTTTTGAGGTGGT
GAAGATCATATACGAAAAACTGCTCGACGTAATGGGCAAGAAATATGTAC
CTGTGGTGTTGGTCGGCAACAAGATCGATCTCCACCAGGAACGAACCGTT
TCCACGGAGGAAGGCAAGAAGCTGGCCGAGTCCTGGCGAGCTGCATTTCT
CGAAACGTCCGCCAAACAGAACGAGTCCGTGGGAGATATATTCCATCAGC
TACTGATCCTCATCGAAAACGAGAACGGCAATCCCCAGGAGAAGAGCGGT
TGTCTTGTATCGTAGAAGCTTTCTAGACC

BS05863.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:13:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG1081-PA 549 Rheb-RA 1..549 17..565 2745 100 Plus
CG1081-PB 549 Rheb-RB 1..549 17..565 2745 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:01:37
Subject Length Description Subject Range Query Range Score Percent Strand
Rheb-RB 1059 CG1081-RB 137..685 17..565 2745 100 Plus
Rheb-RA 1225 CG1081-RA 303..851 17..565 2745 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:01:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5569575..5569782 138..345 1040 100 Plus
3R 32079331 3R 5569842..5569971 346..475 650 100 Plus
3R 32079331 3R 5570026..5570117 474..565 460 100 Plus
3R 32079331 3R 5569399..5569471 65..137 365 100 Plus
3R 32079331 3R 5569223..5569272 17..66 250 100 Plus
Blast to na_te.dros performed 2015-02-12 05:01:34
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 1977..2008 303..334 106 81.2 Plus

BS05863.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:24:42 Download gff for BS05863.5prime
Subject Subject Range Query Range Percent Splice Strand
Rheb-PA 1..549 17..565 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:57:59 Download gff for BS05863.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1081-PB 1..549 17..565 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:13:52 Download gff for BS05863.5prime
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 296..854 9..569 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:17:24 Download gff for BS05863.5prime
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 296..854 9..569 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:17:24 Download gff for BS05863.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5570028..5570120 476..569 97   Plus
3R 5569216..5569271 9..65 92 -> Plus
3R 5569400..5569471 66..137 100 -> Plus
3R 5569575..5569782 138..345 100 -> Plus
3R 5569842..5569971 346..475 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:13:52 Download gff for BS05863.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1394938..1394993 9..65 92 -> Plus
arm_3R 1395122..1395193 66..137 100 -> Plus
arm_3R 1395297..1395504 138..345 100 -> Plus
arm_3R 1395564..1395693 346..475 100 -> Plus
arm_3R 1395750..1395842 476..569 97   Plus

BS05863.complete Sequence

581 bp (581 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ635271

> BS05863.complete
GAAGTTATCAGTCGACATGCCAACCAAGGAGCGCCACATAGCCATGATGG
GCTACCGATCAGTGGGCAAATCGTCGCTATGCATACAGTTCGTGGAGGGC
CAGTTCGTGGACTCCTATGACCCCACCATTGAGAACACCTTCACCAAGAT
CGAGCGTGTAAAGTCGCAAGACTACATCGTAAAGCTCATCGACACGGCGG
GCCAGGACGAGTACAGCATATTCCCGGTGCAGTACAGCATGGATTACCAC
GGCTACGTCCTGGTGTACTCGATAACCAGCCAAAAGTCTTTTGAGGTGGT
GAAGATCATATACGAAAAACTGCTCGACGTAATGGGCAAGAAATATGTAC
CTGTGGTGTTGGTCGGCAACAAGATCGATCTCCACCAGGAACGAACCGTT
TCCACGGAGGAAGGCAAGAAGCTGGCCGAGTCCTGGCGAGCTGCATTTCT
CGAAACGTCCGCCAAACAGAACGAGTCCGTGGGAGATATATTCCATCAGC
TACTGATCCTCATCGAAAACGAGAACGGCAATCCCCAGGAGAAGAGCGGT
TGTCTTGTATCGTAGAAGCTTTCTAGACCAT

BS05863.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:27:39
Subject Length Description Subject Range Query Range Score Percent Strand
Rheb-RB 549 CG1081-PB 1..549 17..565 2745 100 Plus
Rheb-RA 549 CG1081-PA 1..549 17..565 2745 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:27:40
Subject Length Description Subject Range Query Range Score Percent Strand
Rheb-RB 1059 CG1081-RB 137..685 17..565 2745 100 Plus
Rheb-RA 1225 CG1081-RA 303..851 17..565 2745 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:27:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5569575..5569782 138..345 1040 100 Plus
3R 32079331 3R 5569842..5569971 346..475 650 100 Plus
3R 32079331 3R 5570026..5570117 474..565 460 100 Plus
3R 32079331 3R 5569399..5569471 65..137 365 100 Plus
3R 32079331 3R 5569223..5569272 17..66 250 100 Plus
Blast to na_te.dros performed 2014-11-27 14:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 1977..2008 303..334 106 81.2 Plus

BS05863.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:21:32 Download gff for BS05863.complete
Subject Subject Range Query Range Percent Splice Strand
Rheb-RB 1..549 17..565 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:02:54 Download gff for BS05863.complete
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 321..879 9..569 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:43:44 Download gff for BS05863.complete
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 303..851 17..565 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:21:32 Download gff for BS05863.complete
Subject Subject Range Query Range Percent Splice Strand
Rheb-RB 92..650 9..569 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:12:05 Download gff for BS05863.complete
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 303..851 17..565 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:12:05 Download gff for BS05863.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5569842..5569971 346..475 100 -> Plus
3R 5570028..5570117 476..565 100   Plus
3R 5569223..5569271 17..65 100 -> Plus
3R 5569400..5569471 66..137 100 -> Plus
3R 5569575..5569782 138..345 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:43:44 Download gff for BS05863.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1395297..1395504 138..345 100 -> Plus
arm_3R 1395564..1395693 346..475 100 -> Plus
arm_3R 1395750..1395839 476..565 100   Plus
arm_3R 1394945..1394993 17..65 100 -> Plus
arm_3R 1395122..1395193 66..137 100 -> Plus

BS05863.pep Sequence

Translation from 16 to 564

> BS05863.pep
MPTKERHIAMMGYRSVGKSSLCIQFVEGQFVDSYDPTIENTFTKIERVKS
QDYIVKLIDTAGQDEYSIFPVQYSMDYHGYVLVYSITSQKSFEVVKIIYE
KLLDVMGKKYVPVVLVGNKIDLHQERTVSTEEGKKLAESWRAAFLETSAK
QNESVGDIFHQLLILIENENGNPQEKSGCLVS*

BS05863.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:11:11
Subject Length Description Subject Range Query Range Score Percent Strand
Rheb-PB 182 CG1081-PB 1..182 1..182 932 100 Plus
Rheb-PA 182 CG1081-PA 1..182 1..182 932 100 Plus
R-PC 184 CG1956-PC 2..174 4..176 345 41.6 Plus
R-PB 184 CG1956-PB 2..174 4..176 345 41.6 Plus
R-PA 184 CG1956-PA 2..174 4..176 345 41.6 Plus