Clone Sequence Records
BS05863.3prime Sequence
579 bp (578 high quality bases) assembled on 2005-12-03
> BS05863.3prime
ATGGTCTAGAAAGCTTCTACGATACAAGACAACCGCTCTTCTCCTGGGGA
TTGCCGTTCTCGTTTTCGATGAGGATCAGTAGCTGATGGAATATATCTCC
CACGGACTCGTTCTGTTTGGCGGACGTTTCGAGAAATGCAGCTCGCCAGG
ACTCGGCCAGCTTCTTGCCTTCCTCCGTGGAAACGGTTCGTTCCTGGTGG
AGATCGATCTTGTTGCCGACCAACACCACAGGTACATATTTCTTGCCCAT
TACGTCGAGCAGTTTTTCGTATATGATCTTCACCACCTCAAAAGACTTTT
GGCTGGTTATCGAGTACACCAGGACGTAGCCGTGGTAATCCATGCTGTAC
TGCACCGGGAATATGCTGTACTCGTCCTGGCCCGCCGTGTCGATGAGCTT
TACGATGTAGTCTTGCGACTTTACACGCTCGATCTTGGTGAAGGTGTTCT
CAATGGTGGGGTCATAGGAGTCCACGAACTGGCCCTCCACGAACTGTATG
CATAGCGACGATTTGCCCACTGATCGGTAGCCCATCATGGCTATGTGGCG
CTCCTTGGTTGGCATGTCGACTGATAACT
BS05863.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:13:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1081-PA | 549 | Rheb-RA | 1..549 | 565..17 | 2745 | 100 | Minus |
CG1081-PB | 549 | Rheb-RB | 1..549 | 565..17 | 2745 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:41:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rheb-RB | 1059 | CG1081-RB | 137..685 | 565..17 | 2745 | 100 | Minus |
Rheb-RA | 1225 | CG1081-RA | 303..851 | 565..17 | 2745 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:41:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5569575..5569782 | 444..237 | 1040 | 100 | Minus |
3R | 32079331 | 3R | 5569842..5569971 | 236..107 | 650 | 100 | Minus |
3R | 32079331 | 3R | 5570026..5570117 | 108..17 | 460 | 100 | Minus |
3R | 32079331 | 3R | 5569399..5569471 | 517..445 | 365 | 100 | Minus |
3R | 32079331 | 3R | 5569223..5569272 | 565..516 | 250 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 19:41:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc | 4725 | Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). | 1977..2008 | 279..248 | 106 | 81.2 | Minus |
BS05863.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:24:41 Download gff for
BS05863.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-PA | 1..549 | 17..565 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:57:58 Download gff for
BS05863.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1081-PB | 1..549 | 17..565 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:01:41 Download gff for
BS05863.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 296..854 | 13..573 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:12:54 Download gff for
BS05863.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 296..854 | 13..573 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:12:54 Download gff for
BS05863.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5569575..5569782 | 237..444 | 100 | -> | Minus |
3R | 5569842..5569971 | 107..236 | 100 | -> | Minus |
3R | 5570028..5570120 | 13..106 | 97 | | Minus |
3R | 5569216..5569271 | 517..573 | 92 | -> | Minus |
3R | 5569400..5569471 | 445..516 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:01:41 Download gff for
BS05863.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1394938..1394993 | 517..573 | 92 | -> | Minus |
arm_3R | 1395122..1395193 | 445..516 | 100 | -> | Minus |
arm_3R | 1395297..1395504 | 237..444 | 100 | -> | Minus |
arm_3R | 1395564..1395693 | 107..236 | 100 | -> | Minus |
arm_3R | 1395750..1395842 | 13..106 | 97 | | Minus |
BS05863.5prime Sequence
579 bp (578 high quality bases) assembled on 2005-12-03
> BS05863.5prime
GAAGTTATCAGTCGACATGCCAACCAAGGAGCGCCACATAGCCATGATGG
GCTACCGATCAGTGGGCAAATCGTCGCTATGCATACAGTTCGTGGAGGGC
CAGTTCGTGGACTCCTATGACCCCACCATTGAGAACACCTTCACCAAGAT
CGAGCGTGTAAAGTCGCAAGACTACATCGTAAAGCTCATCGACACGGCGG
GCCAGGACGAGTACAGCATATTCCCGGTGCAGTACAGCATGGATTACCAC
GGCTACGTCCTGGTGTACTCGATAACCAGCCAAAAGTCTTTTGAGGTGGT
GAAGATCATATACGAAAAACTGCTCGACGTAATGGGCAAGAAATATGTAC
CTGTGGTGTTGGTCGGCAACAAGATCGATCTCCACCAGGAACGAACCGTT
TCCACGGAGGAAGGCAAGAAGCTGGCCGAGTCCTGGCGAGCTGCATTTCT
CGAAACGTCCGCCAAACAGAACGAGTCCGTGGGAGATATATTCCATCAGC
TACTGATCCTCATCGAAAACGAGAACGGCAATCCCCAGGAGAAGAGCGGT
TGTCTTGTATCGTAGAAGCTTTCTAGACC
BS05863.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:13:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1081-PA | 549 | Rheb-RA | 1..549 | 17..565 | 2745 | 100 | Plus |
CG1081-PB | 549 | Rheb-RB | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:01:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rheb-RB | 1059 | CG1081-RB | 137..685 | 17..565 | 2745 | 100 | Plus |
Rheb-RA | 1225 | CG1081-RA | 303..851 | 17..565 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:01:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5569575..5569782 | 138..345 | 1040 | 100 | Plus |
3R | 32079331 | 3R | 5569842..5569971 | 346..475 | 650 | 100 | Plus |
3R | 32079331 | 3R | 5570026..5570117 | 474..565 | 460 | 100 | Plus |
3R | 32079331 | 3R | 5569399..5569471 | 65..137 | 365 | 100 | Plus |
3R | 32079331 | 3R | 5569223..5569272 | 17..66 | 250 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 05:01:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc | 4725 | Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). | 1977..2008 | 303..334 | 106 | 81.2 | Plus |
BS05863.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:24:42 Download gff for
BS05863.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-PA | 1..549 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:57:59 Download gff for
BS05863.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1081-PB | 1..549 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:13:52 Download gff for
BS05863.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 296..854 | 9..569 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:17:24 Download gff for
BS05863.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 296..854 | 9..569 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:17:24 Download gff for
BS05863.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5570028..5570120 | 476..569 | 97 | | Plus |
3R | 5569216..5569271 | 9..65 | 92 | -> | Plus |
3R | 5569400..5569471 | 66..137 | 100 | -> | Plus |
3R | 5569575..5569782 | 138..345 | 100 | -> | Plus |
3R | 5569842..5569971 | 346..475 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:13:52 Download gff for
BS05863.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1394938..1394993 | 9..65 | 92 | -> | Plus |
arm_3R | 1395122..1395193 | 66..137 | 100 | -> | Plus |
arm_3R | 1395297..1395504 | 138..345 | 100 | -> | Plus |
arm_3R | 1395564..1395693 | 346..475 | 100 | -> | Plus |
arm_3R | 1395750..1395842 | 476..569 | 97 | | Plus |
BS05863.complete Sequence
581 bp (581 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ635271
> BS05863.complete
GAAGTTATCAGTCGACATGCCAACCAAGGAGCGCCACATAGCCATGATGG
GCTACCGATCAGTGGGCAAATCGTCGCTATGCATACAGTTCGTGGAGGGC
CAGTTCGTGGACTCCTATGACCCCACCATTGAGAACACCTTCACCAAGAT
CGAGCGTGTAAAGTCGCAAGACTACATCGTAAAGCTCATCGACACGGCGG
GCCAGGACGAGTACAGCATATTCCCGGTGCAGTACAGCATGGATTACCAC
GGCTACGTCCTGGTGTACTCGATAACCAGCCAAAAGTCTTTTGAGGTGGT
GAAGATCATATACGAAAAACTGCTCGACGTAATGGGCAAGAAATATGTAC
CTGTGGTGTTGGTCGGCAACAAGATCGATCTCCACCAGGAACGAACCGTT
TCCACGGAGGAAGGCAAGAAGCTGGCCGAGTCCTGGCGAGCTGCATTTCT
CGAAACGTCCGCCAAACAGAACGAGTCCGTGGGAGATATATTCCATCAGC
TACTGATCCTCATCGAAAACGAGAACGGCAATCCCCAGGAGAAGAGCGGT
TGTCTTGTATCGTAGAAGCTTTCTAGACCAT
BS05863.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:27:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rheb-RB | 549 | CG1081-PB | 1..549 | 17..565 | 2745 | 100 | Plus |
Rheb-RA | 549 | CG1081-PA | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:27:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rheb-RB | 1059 | CG1081-RB | 137..685 | 17..565 | 2745 | 100 | Plus |
Rheb-RA | 1225 | CG1081-RA | 303..851 | 17..565 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:27:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5569575..5569782 | 138..345 | 1040 | 100 | Plus |
3R | 32079331 | 3R | 5569842..5569971 | 346..475 | 650 | 100 | Plus |
3R | 32079331 | 3R | 5570026..5570117 | 474..565 | 460 | 100 | Plus |
3R | 32079331 | 3R | 5569399..5569471 | 65..137 | 365 | 100 | Plus |
3R | 32079331 | 3R | 5569223..5569272 | 17..66 | 250 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 14:27:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc | 4725 | Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). | 1977..2008 | 303..334 | 106 | 81.2 | Plus |
BS05863.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:21:32 Download gff for
BS05863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RB | 1..549 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:02:54 Download gff for
BS05863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 321..879 | 9..569 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:43:44 Download gff for
BS05863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 303..851 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:21:32 Download gff for
BS05863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RB | 92..650 | 9..569 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:12:05 Download gff for
BS05863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 303..851 | 17..565 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:12:05 Download gff for
BS05863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5569842..5569971 | 346..475 | 100 | -> | Plus |
3R | 5570028..5570117 | 476..565 | 100 | | Plus |
3R | 5569223..5569271 | 17..65 | 100 | -> | Plus |
3R | 5569400..5569471 | 66..137 | 100 | -> | Plus |
3R | 5569575..5569782 | 138..345 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:43:44 Download gff for
BS05863.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1395297..1395504 | 138..345 | 100 | -> | Plus |
arm_3R | 1395564..1395693 | 346..475 | 100 | -> | Plus |
arm_3R | 1395750..1395839 | 476..565 | 100 | | Plus |
arm_3R | 1394945..1394993 | 17..65 | 100 | -> | Plus |
arm_3R | 1395122..1395193 | 66..137 | 100 | -> | Plus |
BS05863.pep Sequence
Translation from 16 to 564
> BS05863.pep
MPTKERHIAMMGYRSVGKSSLCIQFVEGQFVDSYDPTIENTFTKIERVKS
QDYIVKLIDTAGQDEYSIFPVQYSMDYHGYVLVYSITSQKSFEVVKIIYE
KLLDVMGKKYVPVVLVGNKIDLHQERTVSTEEGKKLAESWRAAFLETSAK
QNESVGDIFHQLLILIENENGNPQEKSGCLVS*
BS05863.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:11:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rheb-PB | 182 | CG1081-PB | 1..182 | 1..182 | 932 | 100 | Plus |
Rheb-PA | 182 | CG1081-PA | 1..182 | 1..182 | 932 | 100 | Plus |
R-PC | 184 | CG1956-PC | 2..174 | 4..176 | 345 | 41.6 | Plus |
R-PB | 184 | CG1956-PB | 2..174 | 4..176 | 345 | 41.6 | Plus |
R-PA | 184 | CG1956-PA | 2..174 | 4..176 | 345 | 41.6 | Plus |