Clone BS05866 Report

Search the DGRC for BS05866

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:58
Well:66
Vector:pDNR-Dual
Associated Gene/TranscriptCG11191-RA
Protein status:BS05866.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS05866.3prime Sequence

903 bp (789 high quality bases) assembled on 2005-12-03

> BS05866.3prime
ATGGTCTAGAAAGCTTTCAGAAGCTCCTAAGGCAAAGATTGCAGTTGTTT
CCGCCTACTGCATTGTCGTGTCGGTGCAGCTCCAGGCTGAGGGGCTCCGT
GTCGTCCACCCAGGTCTCCAGGGTGCAGGAGCTGGACTGGTGGCTGGACT
TTTGCGACTGGGAGAGGGATCTGGTGGCCGCCGCCGCCTGCCGCCACCTG
GCTTCGAAGTCATCCCAGCGATCGCAGGCGTCGTCGTCCAGGGAGTTCCC
GTTGATGTCCCACTTAACAATGGGGAAGTCGTCGTGCGGTGGCTCCATGA
TCACCACGCTGTGGTAGTTGCCCTCCAGCTTGGAGCCCAGGCTGATACTG
CAGGGATGGTAGCGGCTGGGCGTGGGAATCCTTTGCTGCACTTGTTGTTT
CCTAGGAGTTGCCTGCTGCAGCACTTGCTGTTTCCGCGGAGTAGCCTGCT
GCTGCTGCTGCTGCTCTGGCTGCTCCTCCTTCTGTTCCTCCAGCTGCAGA
TCCAGACTGGAATTGGAGGGCGTGTGCCGCAGGTAGCGTACATTCGCCTT
GTATTTCACCCGCTCGAACTCGATGGTCGTTAGTGGTGTGTCCAACACCT
CGTAGTTGCCGCAGCTCATCATGTATTTGGTGCGCAGGTCATGCTTGGCC
GCTGGCTGCAGTTCCTCCACCTCCACCTCCTTGGAGGTGGCCAAGTCCAA
GGCCTGGTTGCACTCGCTCAGCTGCAGCTCTTCGTAGATGGCCTCCGTCA
CCGGACAGTTGCTGTTCACATCCAGCTCCAGATCTCGCTGCAGGTTGAGC
TCCTCCTCCAACTCCTCGTCGTCCCCGTCCTCCTCGTCCCAGCGCTGGAC
AAAGAGCTGCTTTGAAGTCGATATCTTGCGCAAGAACTTCAGACAGGACT
TCT

BS05866.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:14:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-PA 912 CG11191-RA 90..912 839..17 4090 99.8 Minus
CG11191-PA 912 CG11191-RA 26..86 903..843 280 98.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:20:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-RB 1459 CG11191-RB 182..1068 903..17 4360 99.5 Minus
CG11191-RA 1300 CG11191-RA 182..1068 903..17 4360 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:19:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8000881..8001752 17..888 4285 99.4 Plus
Blast to na_te.dros performed on 2015-02-02 18:20:03 has no hits.

BS05866.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:24:47 Download gff for BS05866.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-PA 26..912 17..903 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:58:06 Download gff for BS05866.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-PA 26..912 17..903 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:09:56 Download gff for BS05866.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 182..1068 17..903 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:52:16 Download gff for BS05866.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 182..1068 17..903 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 20:52:16 Download gff for BS05866.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 8000881..8001750 17..886 99 <- Plus
2R 8001923..8001939 887..903 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:09:56 Download gff for BS05866.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3888386..3889255 17..886 99 <- Plus
arm_2R 3889428..3889444 887..903 100   Plus

BS05866.5prime Sequence

936 bp (789 high quality bases) assembled on 2005-12-03

> BS05866.5prime
GAAGTTATCAGTCGACATGTCGCACTTGCTGAGGCGCACCAAGAAGTCCT
GTCTGAAGTTCCTGCGCAAGATATCGACTTCAAAGCAGCTCTTTGTCCAG
CGGCTGGACGAGGAGGACGGGGACGACGAGGAGGTGGAGGAGGAGCTCAA
CCTGCAGCGAGATCTGGAGCTGGATGTGAACAGCAACTGTCCGGTGACGG
AGGCCATCTACGAAGAGCTGCAGCTGAGCGAGTGCAACCAGGCCTTGGAC
TTGGCCACCTCCAAGGAGGTGGAGGTGGAGGAACTGCAGCCAGCGGCCAA
GCATGACCTGCGCACCAAATACATGATGAGCTGCGGCAACTACGAGGTGT
TGGACACACCACTAACGACCATCGAGTTCGAGCGGGTGAAATACAAGGCG
AATGTACGCTACCTGCGGCACACGCCCTCCAATTCCAGTCTGGATCTGCA
GCTGGAGGAACAGAAGGAGGAGCAGCCAGAGCAGCAGCAGCAGCAGCAGG
CTACTCCGCGGAAACAGCAAGTGCTGCAGCAGGCAACTCCTAGGAAACAA
CAAGTGCAGCAAAGGATTCCCACGCCCAGCCGCTACCATCCCTGCAGTAT
CAGCCTGGGCTCCAAGCTGGAGGGCAACTACCACAGCGTGGTGATCATGG
AGCCACCGCACGACGACTTCCCCATTGTTAAGTGGGACATCAACGGGAAC
TCCCTGGACGACGACGCCTGCGATCGCTGGGATGACTTCGAAGCCAGGTG
GCGGCAGGCGGCGGCGGCCACCAGATCCCTCTCCCAGTCGCAAAAGTCCA
GCCACCAGTCCAGCTCCTGCACCCTGGAGACCTGGGTGGACGACACGGAG
CCCCTCAGCCTGGAGCTGCACCGACACGACAATGCAGTAGGCGGAAAACA
CTGCATCTTTGCTTANGAGCTTCTGAAAGCTTCTAG

BS05866.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:14:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-PA 912 CG11191-RA 1..881 17..897 4405 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:14:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-RB 1459 CG11191-RB 156..1068 16..926 4474 99.5 Plus
CG11191-RA 1300 CG11191-RA 156..1068 16..926 4474 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8000904..8001752 905..57 4215 99.8 Minus
2R 25286936 2R 8001923..8001965 58..16 215 100 Minus
Blast to na_te.dros performed on 2015-02-12 20:14:27 has no hits.

BS05866.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:24:48 Download gff for BS05866.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-PA 1..912 17..926 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:58:08 Download gff for BS05866.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-PA 1..912 17..926 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:36:45 Download gff for BS05866.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 143..1068 2..926 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:34:52 Download gff for BS05866.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 143..1068 2..926 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:34:52 Download gff for BS05866.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8000881..8001750 59..926 99 <- Minus
2R 8001923..8001978 2..58 91   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:36:45 Download gff for BS05866.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3888386..3889255 59..926 99 <- Minus
arm_2R 3889428..3889483 2..58 91   Minus

BS05866.complete Sequence

944 bp (944 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ635273

> BS05866.complete
GAAGTTATCAGTCGACATGTCGCACTTGCTGAGGCGCACCAAGAAGTCCT
GTCTGAAGTTCCTGCGCAAGATATCGACTTCAAAGCAGCTCTTTGTCCAG
CGGCTGGACGAGGAGGACGGGGACGACGAGGAGGTGGAGGAGGAGCTCAA
CCTGCAGCGAGATCTGGAGCTGGATGTGAACAGCAACTGTCCGGTGACGG
AGGCCATCTACGAAGAGCTGCAGCTGAGCGAGTGCAACCAGGCCTTGGAC
TTGGCCACCTCCAAGGAGGTGGAGGTGGAGGAACTGCAGCCAGCGGCCAA
GCATGACCTGCGCACCAAATACATGATGAGCTGCGGCAACTACGAGGTGT
TGGACACACCACTAACGACCATCGAGTTCGAGCGGGTGAAATACAAGGCG
AATGTACGCTACCTGCGGCACACGCCCTCCAATTCCAGTCTGGATCTGCA
GCTGGAGGAACAGAAGGAGGAGCAGCCAGAGCAGCAGCAGCAGCAGCAGG
CTACTCCGCGGAAACAGCAAGTGCTGCAGCAGGCAACTCCTAGGAAACAA
CAAGTGCAGCAAAGGATTCCCACGCCCAGCCGCTACCATCCCTGCAGTAT
CAGCCTGGGCTCCAAGCTGGAGGGCAACTACCACAGCGTGGTGATCATGG
AGCCACCGCACGACGACTTCCCCATTGTTAAGTGGGACATCAACGGGAAC
TCCCTGGACGACGACGCCTGCGATCGCTGGGATGACTTCGAAGCCAGGTG
GCGGCAGGCGGCGGCGGCCACCAGATCCCTCTCCCAGTCGCAAAAGTCCA
GCCACCAGTCCAGCTCCTGCACCCTGGAGACCTGGGTGGACGACACGGAG
CCCCTCAGCCTGGAGCTGCACCGACACGACAATGCAGTAGGCGGAAACAA
CTGCAATCTTTGCCTTAGGAGCTTCTGAAAGCTTTCTAGACCAT

BS05866.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:58:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-RB 912 CG11191-PB 1..912 17..928 4560 100 Plus
CG11191-RA 912 CG11191-PA 1..912 17..928 4560 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-RB 1459 CG11191-RB 156..1068 16..928 4565 100 Plus
CG11191-RA 1300 CG11191-RA 156..1068 16..928 4565 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8000881..8001752 928..57 4360 100 Minus
2R 25286936 2R 8001923..8001965 58..16 215 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:57:59 has no hits.

BS05866.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:20:22 Download gff for BS05866.complete
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 1..912 17..928 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:01:33 Download gff for BS05866.complete
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 143..1068 2..928 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:06:56 Download gff for BS05866.complete
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 157..1067 17..927 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:20:22 Download gff for BS05866.complete
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 143..1068 2..928 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:01 Download gff for BS05866.complete
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 157..1067 17..927 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:01 Download gff for BS05866.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8000882..8001750 59..927 100 <- Minus
2R 8001923..8001964 17..58 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:06:56 Download gff for BS05866.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3888387..3889255 59..927 100 <- Minus
arm_2R 3889428..3889469 17..58 100   Minus

BS05866.pep Sequence

Translation from 16 to 927

> BS05866.pep
MSHLLRRTKKSCLKFLRKISTSKQLFVQRLDEEDGDDEEVEEELNLQRDL
ELDVNSNCPVTEAIYEELQLSECNQALDLATSKEVEVEELQPAAKHDLRT
KYMMSCGNYEVLDTPLTTIEFERVKYKANVRYLRHTPSNSSLDLQLEEQK
EEQPEQQQQQQATPRKQQVLQQATPRKQQVQQRIPTPSRYHPCSISLGSK
LEGNYHSVVIMEPPHDDFPIVKWDINGNSLDDDACDRWDDFEARWRQAAA
ATRSLSQSQKSSHQSSSCTLETWVDDTEPLSLELHRHDNAVGGNNCNLCL
RSF*

BS05866.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:51:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-PB 303 CG11191-PB 1..303 1..303 1594 100 Plus
CG11191-PA 303 CG11191-PA 1..303 1..303 1594 100 Plus