Clone Sequence Records
BS05912.3prime Sequence
876 bp (758 high quality bases) assembled on 2005-12-03
> BS05912.3prime
ATGGTCTAGAAAGCTTCTACACTCGCTTGGGACAAGAGCCAAAGCGGTAG
ACCACCTGGTGATCGTAAAGCTGGCCGGGATTGAGCACGACTGAGGGAAA
GTCGCAGTGGTTCATGGCGTCCGGGTACTTCTGCGTCTCCAGGGTGAAGG
CTCCCTGGCGGACATAGTTGACCCCATCCTTGCCCGCGATGGGGATGTCC
GAGCCGTCCTCGCTCGGCAAATGGTTCGCCGTGCTGAACTGGAGGCCCGG
CTGGTTGGTGTGCACCTCCATGAACCGGCCACTGCATGGGTGAACCACTC
GGGCGACCAATTGCACCCGGTTTGGAGGAATGTCCACGCAGAAATGGTTG
TCGAAGCCGCCCAGCGGACATGTGGACACCTGGTTGAGCCGCTTGCCCAG
ACTGACCAGGCTGGAGAAGTCGTACGGGGTGGTGCGCACGCGCATCAGCT
TCCCGGTGGGCAGGAGCTCCTGGTCCACGTCCACTATCTTCTGGGCCTTG
ATCATCAGCATGTGCTGATAGAGCGTATCCCGGCCCGCGCCGTGTCCGGC
CAAATTGAAGAAGCTGTGGTTCGAGATGTTCACCGCCGTGGTGGCCTTCG
TCCGCGCCTCGATCCGCATCCCAAAGCAGCCCGTCTCGTTGAGCGAGAAG
TTGATGTTGGTGGTCAGCTCGCCCGGATAGCCCTCGTGCCCATCTGGCGA
GATGTGCTGCAGGGTGACACCGTCCTTGTGCACCCCTACCACGTCCCAGA
TGACGCTGTCGAAGCCCACGACCCCGCCGTTCTGGTGATGCCTATCCCGC
AAGTTTCGACTCACACTGACCTCCCTGCCGCAGAGCTTGAAGCGCCCGTG
TGCTGTACGATTGGCCACCCCGGCCA
BS05912.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:14:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32445-PA | 1104 | CG32445-RA | 251..1104 | 870..17 | 4220 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:32:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32445-RA | 1352 | CG32445-RA | 363..1221 | 876..17 | 4245 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:32:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21639726..21640579 | 870..17 | 4240 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-10 18:32:27 has no hits.
BS05912.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:25:59 Download gff for
BS05912.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-PA | 247..1104 | 17..875 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:59:47 Download gff for
BS05912.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-PA | 247..1104 | 17..875 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:39:02 Download gff for
BS05912.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-RA | 364..1233 | 5..875 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:07:30 Download gff for
BS05912.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-RA | 364..1233 | 5..875 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:07:30 Download gff for
BS05912.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21639722..21640591 | 5..875 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:39:02 Download gff for
BS05912.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21632822..21633691 | 5..875 | 99 | | Minus |
BS05912.5prime Sequence
850 bp (738 high quality bases) assembled on 2005-12-03
> BS05912.5prime
GAAGTTATCAGTCGACATGGTGCGAGTGATCGAAGACATGTTCGGCATCG
CCGTCAACCCGATGACGCAGAAGACTGACCGTGTCCGGCGCTTCACGCTG
GTCACAGAGCGCGGCATGTCGGTGTCGATCCTGACGATGGGTGCCATAAT
CCAGTCCTTGAAGGTTCCCGACTTCAACGGAAAGCTGGAGGACGTGTGCC
TGGGCTACGACGACGTGGCAGGCTACTACCGTAACCAGCAATACTTCTTT
GGAGCCACCATTGGCCGGGTGGCCAATCGTACAGCACACGGGCGCTTCAA
GCTCTGCGGCAAGGAGGTCAGTGTGAGTCGAAACTTGCGGGATAGGCATC
ACCAGAACGGCGGGTTCGTGGGCTTCGACAGCGTCATCTGGGACGTGGTA
GGGGTGCACAAGGACGGTGTCACCCTGCAGCACATCTCGCCAGATGGGCA
CGAGGGCTATCCGGGCGAGCTGACCACCAACATCAACTTCTCGCTCAACG
AGACGGGCTGCTTTGGGATGCGGATCGAGGCGCGGACGAAGGCCACCACG
GCGGTGAACATCTCGAACCACAGCTTCTTCAATTTGGCCGGACACGGCGC
GGGCCGGGATACGCTCTATCAGCACATGCTGATGATCAAGGCCCAGAAGA
TAGTGGACGTGGACCAGGAGCTCCTGCCCACCGGGAAGCTGATGCGCGTG
CGCACCACCCCGTACGACTTCTCCAGCCTGGTCAGTCTGGGCAAGCGGCT
CAACCAGGTGTCCACATGTCCGCTGGGCGGCTTCGACACCATTTCTGCGT
GGACATTCCTCAAAACCGGGTGCATTGGGTCGCCCGAGTGGTTCACCCAT
BS05912.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:14:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32445-PA | 1104 | CG32445-RA | 1..772 | 17..788 | 3860 | 100 | Plus |
| CG32445-PA | 1104 | CG32445-RA | 773..835 | 788..850 | 240 | 95.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:57:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32445-RA | 1352 | CG32445-RA | 118..952 | 17..850 | 4105 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:57:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21639476..21640310 | 17..850 | 4080 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:57:08 has no hits.
BS05912.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:26:00 Download gff for
BS05912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-PA | 1..835 | 17..850 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 08:59:48 Download gff for
BS05912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-PA | 1..835 | 17..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:12:50 Download gff for
BS05912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-RA | 118..952 | 17..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:16:16 Download gff for
BS05912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-RA | 118..952 | 17..850 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:16:16 Download gff for
BS05912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21639476..21640310 | 17..850 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:12:50 Download gff for
BS05912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21632576..21633410 | 17..850 | 99 | | Plus |
BS05912.complete Sequence
1136 bp (1136 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ635294
> BS05912.complete
GAAGTTATCAGTCGACATGGTGCGAGTGATCGAAGACATGTTCGGCATCG
CCGTCAACCCGATGACGCAGAAGACTGACCGTGTCCGGCGCTTCACGCTG
GTCACAGAGCGCGGCATGTCGGTGTCGATCCTGACGATGGGTGCCATAAT
CCAGTCCTTGAAGGTTCCCGACTTCAACGGAAAGCTGGAGGACGTGTGCC
TGGGCTACGACGACGTGGCAGGCTACTACCGTAACCAGCAATACTTCTTT
GGAGCCACCATTGGCCGGGTGGCCAATCGTACAGCACACGGGCGCTTCAA
GCTCTGCGGCAAGGAGGTCAGTGTGAGTCGAAACTTGCGGGATAGGCATC
ACCAGAACGGCGGGTTCGTGGGCTTCGACAGCGTCATCTGGGACGTGGTA
GGGGTGCACAAGGACGGTGTCACCCTGCAGCACATCTCGCCAGATGGGCA
CGAGGGCTATCCGGGCGAGCTGACCACCAACATCAACTTCTCGCTCAACG
AGACGGGCTGCTTTGGGATGCGGATCGAGGCGCGGACGAAGGCCACCACG
GCGGTGAACATCTCGAACCACAGCTTCTTCAATTTGGCCGGACACGGCGC
GGGCCGGGATACGCTCTATCAGCACATGCTGATGATCAAGGCCCAGAAGA
TAGTGGACGTGGACCAGGAGCTCCTGCCCACCGGGAAGCTGATGCGCGTG
CGCACCACCCCGTACGACTTCTCCAGCCTGGTCAGTCTGGGCAAGCGGCT
CAACCAGGTGTCCACATGTCCGCTGGGCGGCTTCGACAACCATTTCTGCG
TGGACATTCCTCCAAACCGGGTGCAATTGGTCGCCCGAGTGGTTCACCCA
TGCAGTGGCCGGTTCATGGAGGTGCACACCAACCAGCCGGGCCTCCAGTT
CAGCACGGCGAACCATTTGCCGAGCGAGGACGGCTCGGACATCCCCATCG
CGGGCAAGGATGGGGTCAACTATGTCCGCCAGGGAGCCTTCACCCTGGAG
ACGCAGAAGTACCCGGACGCCATGAACCACTGCGACTTTCCCTCAGTCGT
GCTCAATCCCGGCCAGCTTTACGATCACCAGGTGGTCTACCGCTTTGGCT
CTTGTCCCAAGCGAGTGTAGAAGCTTTCTAGACCAT
BS05912.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:43:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32445-RA | 1104 | CG32445-PA | 1..1104 | 17..1120 | 5520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:43:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32445-RA | 1352 | CG32445-RA | 118..1221 | 17..1120 | 5520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:43:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21639476..21640579 | 17..1120 | 5520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:43:07 has no hits.
BS05912.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:20:42 Download gff for
BS05912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-RA | 1..1104 | 17..1120 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:01:53 Download gff for
BS05912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-RA | 95..1210 | 17..1132 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:52:26 Download gff for
BS05912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-RA | 118..1221 | 17..1120 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:20:42 Download gff for
BS05912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-RA | 95..1210 | 17..1132 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:03:22 Download gff for
BS05912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32445-RA | 118..1221 | 17..1120 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:03:22 Download gff for
BS05912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21639476..21640579 | 17..1120 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:52:26 Download gff for
BS05912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21632576..21633679 | 17..1120 | 100 | | Plus |
BS05912.pep Sequence
Translation from 16 to 1119
> BS05912.pep
MVRVIEDMFGIAVNPMTQKTDRVRRFTLVTERGMSVSILTMGAIIQSLKV
PDFNGKLEDVCLGYDDVAGYYRNQQYFFGATIGRVANRTAHGRFKLCGKE
VSVSRNLRDRHHQNGGFVGFDSVIWDVVGVHKDGVTLQHISPDGHEGYPG
ELTTNINFSLNETGCFGMRIEARTKATTAVNISNHSFFNLAGHGAGRDTL
YQHMLMIKAQKIVDVDQELLPTGKLMRVRTTPYDFSSLVSLGKRLNQVST
CPLGGFDNHFCVDIPPNRVQLVARVVHPCSGRFMEVHTNQPGLQFSTANH
LPSEDGSDIPIAGKDGVNYVRQGAFTLETQKYPDAMNHCDFPSVVLNPGQ
LYDHQVVYRFGSCPKRV*
BS05912.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:51:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32445-PA | 367 | CG32445-PA | 1..367 | 1..367 | 1956 | 100 | Plus |
| CG10467-PA | 364 | CG10467-PA | 1..361 | 1..361 | 943 | 49.3 | Plus |
| CG32444-PA | 370 | CG32444-PA | 7..356 | 6..360 | 852 | 46.8 | Plus |
| CG4988-PA | 368 | CG4988-PA | 3..356 | 2..360 | 848 | 47.4 | Plus |
| CG10996-PA | 392 | CG10996-PA | 1..364 | 1..361 | 840 | 45.3 | Plus |
