Clone Sequence Records
BS05931.3prime Sequence
678 bp (677 high quality bases) assembled on 2005-12-03
> BS05931.3prime
ATGGTCTAGAAAGCTTCTACGCCGTGGAGTTGGCCGTTTCGGTGATCTTC
TGGCGCACCTGCTGCACCACATCCGCTACGTTGTTCACAAACGAAAGCCA
CATGGCCTTGATTCTGGTGCCCAGGCCCAAGGGATCCGCTCCGTCCATAT
TCTGTGTCACTTCCATGCCCTTCTCCTCCTGCCGTCGTCGTCGCACCAAC
TTCTTGTTCTTTTTGCCAGTGGTCTTGGGACTCACTCGGGATCGGGAGGC
ATTGTTGGCGGCCCGCTTTTGAGCTCGTCTCCGTCTGGCCTCCACGTCAT
CGTCGGCGGACGCCGCTGTGGTGGCGGCAGCGCTCATTTTCCAGAAGCAA
GGAGCGCGTTTGAGGCGATGCAGGCTCCGCCGCCTTCGCTTCCGACGACG
ATCCTCCTCGGATGAATCGGTGGCAATGGGACGTATGGCATCTCCATAGC
CAACGGCCGTTTTCGAGTGCACGGACATCAGGGGATTGTCAATGTCGACG
TCGCGGGAGATGGCGGCGCCACTCTGAACTGCCTCCGCTATATTTCCGGC
CAGAGACATGGCGCCCATGCCCAGCGACTCTAGCGGATTCTGTGGACCTG
GCCTGGCCGCAATCATGGCCAGACCCGCGACAACCAGGAGAAGTGCCAGC
TGATGGCGATTCATGTCGACTGATAACT
BS05931.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:15:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-PA | 648 | CG6290-RA | 1..648 | 664..17 | 3240 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:10:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-RA | 744 | CG6290-RA | 15..664 | 664..15 | 3250 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:10:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18437504..18438153 | 664..15 | 3250 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:10:54 has no hits.
BS05931.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:26:34 Download gff for
BS05931.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-PA | 1..648 | 17..664 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:00:32 Download gff for
BS05931.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-PA | 1..648 | 17..664 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:46:17 Download gff for
BS05931.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..650 | 15..664 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:54:16 Download gff for
BS05931.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 15..664 | 15..664 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:54:16 Download gff for
BS05931.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18437504..18438153 | 15..664 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:46:17 Download gff for
BS05931.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18331537..18332186 | 15..664 | 100 | | Minus |
BS05931.5prime Sequence
678 bp (677 high quality bases) assembled on 2005-12-03
> BS05931.5prime
GAAGTTATCAGTCGACATGAATCGCCATCAGCTGGCACTTCTCCTGGTTG
TCGCGGGTCTGGCCATGATTGCGGCCAGGCCAGGTCCACAGAATCCGCTA
GAGTCGCTGGGCATGGGCGCCATGTCTCTGGCCGGAAATATAGCGGAGGC
AGTTCAGAGTGGCGCCGCCATCTCCCGCGACGTCGACATTGACAATCCCC
TGATGTCCGTGCACTCGAAAACGGCCGTTGGCTATGGAGATGCCATACGT
CCCATTGCCACCGATTCATCCGAGGAGGATCGTCGTCGGAAGCGAAGGCG
GCGGAGCCTGCATCGCCTCAAACGCGCTCCTTGCTTCTGGAAAATGAGCG
CTGCCGCCACCACAGCGGCGTCCGCCGACGATGACGTGGAGGCCAGACGG
AGACGAGCTCAAAAGCGGGCCGCCAACAATGCCTCCCGATCCCGAGTGAG
TCCCAAGACCACTGGCAAAAAGAACAAGAAGTTGGTGCGACGACGACGGC
AGGAGGAGAAGGGCATGGAAGTGACACAGAATATGGACGGAGCGGATCCC
TTGGGCCTGGGCACCAGAATCAAGGCCATGTGGCTTTCGTTTGTGAACAA
CGTAGCGGATGTGGTGCAGCAGGTGCGCCAGAAGATCACCGAAACGGCCA
ACTCCACGGCGTAGAAGCTTTCTAGACC
BS05931.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:15:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-PA | 648 | CG6290-RA | 1..648 | 17..664 | 3240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:50:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-RA | 744 | CG6290-RA | 15..664 | 17..666 | 3250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:50:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18437504..18438153 | 17..666 | 3250 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:50:42 has no hits.
BS05931.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:26:35 Download gff for
BS05931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-PA | 1..648 | 17..664 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:00:34 Download gff for
BS05931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-PA | 1..648 | 17..664 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:26:41 Download gff for
BS05931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..650 | 17..666 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:30:20 Download gff for
BS05931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 15..664 | 17..666 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:30:20 Download gff for
BS05931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18437504..18438153 | 17..666 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:26:41 Download gff for
BS05931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18331537..18332186 | 17..666 | 100 | | Plus |
BS05931.complete Sequence
680 bp (680 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ635303
> BS05931.complete
GAAGTTATCAGTCGACATGAATCGCCATCAGCTGGCACTTCTCCTGGTTG
TCGCGGGTCTGGCCATGATTGCGGCCAGGCCAGGTCCACAGAATCCGCTA
GAGTCGCTGGGCATGGGCGCCATGTCTCTGGCCGGAAATATAGCGGAGGC
AGTTCAGAGTGGCGCCGCCATCTCCCGCGACGTCGACATTGACAATCCCC
TGATGTCCGTGCACTCGAAAACGGCCGTTGGCTATGGAGATGCCATACGT
CCCATTGCCACCGATTCATCCGAGGAGGATCGTCGTCGGAAGCGAAGGCG
GCGGAGCCTGCATCGCCTCAAACGCGCTCCTTGCTTCTGGAAAATGAGCG
CTGCCGCCACCACAGCGGCGTCCGCCGACGATGACGTGGAGGCCAGACGG
AGACGAGCTCAAAAGCGGGCCGCCAACAATGCCTCCCGATCCCGAGTGAG
TCCCAAGACCACTGGCAAAAAGAACAAGAAGTTGGTGCGACGACGACGGC
AGGAGGAGAAGGGCATGGAAGTGACACAGAATATGGACGGAGCGGATCCC
TTGGGCCTGGGCACCAGAATCAAGGCCATGTGGCTTTCGTTTGTGAACAA
CGTAGCGGATGTGGTGCAGCAGGTGCGCCAGAAGATCACCGAAACGGCCA
ACTCCACGGCGTAGAAGCTTTCTAGACCAT
BS05931.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:33:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-RA | 648 | CG6290-PA | 1..648 | 17..664 | 3240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:33:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-RA | 744 | CG6290-RA | 15..664 | 17..666 | 3250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:33:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18437504..18438153 | 17..666 | 3250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:33:45 has no hits.
BS05931.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:20:51 Download gff for
BS05931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..648 | 17..664 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:02:04 Download gff for
BS05931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..650 | 17..666 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:02:06 Download gff for
BS05931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..648 | 17..664 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:20:52 Download gff for
BS05931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..650 | 17..666 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:04:27 Download gff for
BS05931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 15..662 | 17..664 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:04:27 Download gff for
BS05931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18437504..18438151 | 17..664 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:02:06 Download gff for
BS05931.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18331537..18332184 | 17..664 | 100 | | Plus |
BS05931.pep Sequence
Translation from 16 to 663
> BS05931.pep
MNRHQLALLLVVAGLAMIAARPGPQNPLESLGMGAMSLAGNIAEAVQSGA
AISRDVDIDNPLMSVHSKTAVGYGDAIRPIATDSSEEDRRRKRRRRSLHR
LKRAPCFWKMSAAATTAASADDDVEARRRRAQKRAANNASRSRVSPKTTG
KKNKKLVRRRRQEEKGMEVTQNMDGADPLGLGTRIKAMWLSFVNNVADVV
QQVRQKITETANSTA*
BS05931.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:51:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-PA | 215 | CG6290-PA | 1..215 | 1..215 | 1071 | 100 | Plus |
