Clone Sequence Records
BS05970.5prime Sequence
444 bp (443 high quality bases) assembled on 2005-12-03
> BS05970.5prime
GAAGTTATCAGTCGACATGAGCAAGCCTTTGTCCTTCATCTCGATGGTGG
CCGTGATTTTGCTGGCCAGCTCCACAGTGAAGTTGGCCCAAGGAACGCTC
TGCAGTGAAAAGCTCAACGAGGTGCTGAGTATGGTGTGCGAGGAGTATAA
TCCCGTGATTCCACACAAGCGCGCCATGCCCGGTGCCGACAGCGATCTGG
ACGCCCTCAATCCCCTGCAGTTTGTCCAGGAGTTCGAGGAGGAGGATAAC
TCGATATCGGAACCGCTGCGAAGTGCCCTCTTTCCTGGGAGCTATCTTGG
GGGTGTACTCAATTCCCTGGCTGAAGTCCGGAGGCGAACTCGCCAACGGC
AAGGAATCGTGGAGAGGTGCTGCAAAAAGTCCTGTGATATGAAGGCTCTG
CGGGAGTACTGCTCCGTGGTCAGAAATTAGAAGCTTTCTAGACC
BS05970.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:16:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8167-PA | 414 | Ilp2-RA | 1..414 | 17..430 | 2070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:14:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ilp2-RA | 670 | CG8167-RA | 66..480 | 16..430 | 2075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:14:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9800000..9800250 | 180..430 | 1255 | 100 | Plus |
3L | 28110227 | 3L | 9799763..9799926 | 16..179 | 820 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 13:14:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 4108..4145 | 193..230 | 109 | 76.3 | Plus |
BS05970.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:27:32 Download gff for
BS05970.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ilp2-PA | 1..414 | 17..430 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:01:54 Download gff for
BS05970.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8167-PA | 1..414 | 17..430 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:09:40 Download gff for
BS05970.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ilp2-RA | 60..488 | 9..440 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:53:52 Download gff for
BS05970.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ilp2-RA | 60..488 | 9..440 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:53:52 Download gff for
BS05970.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9799757..9799926 | 9..179 | 97 | -> | Plus |
3L | 9800000..9800258 | 180..440 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:09:40 Download gff for
BS05970.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9792857..9793026 | 9..179 | 97 | -> | Plus |
arm_3L | 9793100..9793358 | 180..440 | 98 | | Plus |
BS05970.3prime Sequence
444 bp (443 high quality bases) assembled on 2005-12-03
> BS05970.3prime
ATGGTCTAGAAAGCTTCTAATTTCTGACCACGGAGCAGTACTCCCGCAGA
GCCTTCATATCACAGGACTTTTTGCAGCACCTCTCCACGATTCCTTGCCG
TTGGCGAGTTCGCCTCCGGACTTCAGCCAGGGAATTGAGTACACCCCCAA
GATAGCTCCCAGGAAAGAGGGCACTTCGCAGCGGTTCCGATATCGAGTTA
TCCTCCTCCTCGAACTCCTGGACAAACTGCAGGGGATTGAGGGCGTCCAG
ATCGCTGTCGGCACCGGGCATGGCGCGCTTGTGTGGAATCACGGGATTAT
ACTCCTCGCACACCATACTCAGCACCTCGTTGAGCTTTTCACTGCAGAGC
GTTCCTTGGGCCAACTTCACTGTGGAGCTGGCCAGCAAAATCACGGCCAC
CATCGAGATGAAGGACAAAGGCTTGCTCATGTCGACTGATAACT
BS05970.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:16:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8167-PA | 414 | Ilp2-RA | 1..414 | 430..17 | 2070 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:17:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ilp2-RA | 670 | CG8167-RA | 66..480 | 431..17 | 2075 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:17:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9800000..9800250 | 267..17 | 1255 | 100 | Minus |
3L | 28110227 | 3L | 9799763..9799926 | 431..268 | 820 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 18:17:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 4108..4145 | 254..217 | 109 | 76.3 | Minus |
BS05970.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:27:31 Download gff for
BS05970.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ilp2-PA | 1..414 | 17..430 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:01:52 Download gff for
BS05970.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8167-PA | 1..414 | 17..430 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:39:23 Download gff for
BS05970.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ilp2-RA | 60..488 | 7..438 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:34:59 Download gff for
BS05970.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ilp2-RA | 60..488 | 7..438 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:34:59 Download gff for
BS05970.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9799757..9799926 | 268..438 | 97 | -> | Minus |
3L | 9800000..9800258 | 7..267 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:39:23 Download gff for
BS05970.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9792857..9793026 | 268..438 | 97 | -> | Minus |
arm_3L | 9793100..9793358 | 7..267 | 98 | | Minus |
BS05970.complete Sequence
446 bp (446 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ635310
> BS05970.complete
GAAGTTATCAGTCGACATGAGCAAGCCTTTGTCCTTCATCTCGATGGTGG
CCGTGATTTTGCTGGCCAGCTCCACAGTGAAGTTGGCCCAAGGAACGCTC
TGCAGTGAAAAGCTCAACGAGGTGCTGAGTATGGTGTGCGAGGAGTATAA
TCCCGTGATTCCACACAAGCGCGCCATGCCCGGTGCCGACAGCGATCTGG
ACGCCCTCAATCCCCTGCAGTTTGTCCAGGAGTTCGAGGAGGAGGATAAC
TCGATATCGGAACCGCTGCGAAGTGCCCTCTTTCCTGGGAGCTATCTTGG
GGGTGTACTCAATTCCCTGGCTGAAGTCCGGAGGCGAACTCGCCAACGGC
AAGGAATCGTGGAGAGGTGCTGCAAAAAGTCCTGTGATATGAAGGCTCTG
CGGGAGTACTGCTCCGTGGTCAGAAATTAGAAGCTTTCTAGACCAT
BS05970.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:12:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ilp2-RA | 414 | CG8167-PA | 1..414 | 17..430 | 2070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:12:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ilp2-RA | 670 | CG8167-RA | 66..480 | 16..430 | 2075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:12:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9800000..9800250 | 180..430 | 1255 | 100 | Plus |
3L | 28110227 | 3L | 9799763..9799926 | 16..179 | 820 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 01:12:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 4108..4145 | 193..230 | 109 | 76.3 | Plus |
BS05970.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:20:39 Download gff for
BS05970.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ilp2-RA | 1..414 | 17..430 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:57:26 Download gff for
BS05970.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ilp2-RA | 60..488 | 9..440 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:42:28 Download gff for
BS05970.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ilp2-RA | 67..480 | 17..430 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:20:39 Download gff for
BS05970.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ilp2-RA | 60..488 | 9..440 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:47:41 Download gff for
BS05970.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ilp2-RA | 67..480 | 17..430 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:47:41 Download gff for
BS05970.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9799764..9799926 | 17..179 | 100 | -> | Plus |
3L | 9800000..9800250 | 180..430 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:42:28 Download gff for
BS05970.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9792864..9793026 | 17..179 | 100 | -> | Plus |
arm_3L | 9793100..9793350 | 180..430 | 100 | | Plus |
BS05970.pep Sequence
Translation from 16 to 429
> BS05970.pep
MSKPLSFISMVAVILLASSTVKLAQGTLCSEKLNEVLSMVCEEYNPVIPH
KRAMPGADSDLDALNPLQFVQEFEEEDNSISEPLRSALFPGSYLGGVLNS
LAEVRRRTRQRQGIVERCCKKSCDMKALREYCSVVRN*
BS05970.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:51:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ilp2-PA | 137 | CG8167-PA | 1..137 | 1..137 | 696 | 100 | Plus |