Clone Sequence Records
BS06010.3prime Sequence
759 bp (758 high quality bases) assembled on 2005-12-03
> BS06010.3prime
ATGGTCTAGAAAGCTTTTAACAACTTGTTTTGAGCGCACTTGTAAAGGAT
ATGGCCAGGATGCGTTCGTGCAGGATCATGTAGGAGAAAAACTGCAGGAC
ACTGAGGAACAAGTACTCGTTCTTGGGCACATCGAACTGGCGATCATGGA
TTATGGTAGCCGTGTACATCACCATGCAGACGGCCACCAGGGCGAATGTG
TTCCGAACCGCAAAATATATTCCCTGGTAGTTGATAAATAGGACATTGAT
AAAGAATATGATCATCATAATGTTGGCTATTGCCACCAAACAGCTGAGCA
GCAGATCACCGGGAACAATGAACATGGGAAAGTAGGCGCCCCAAAATATC
GAGGCCAACATCAAGGCAACCACTACAATGCCGGCGTAGAAGTTGACGAG
TCTATTCTCATTGTGCTTCTGTTCCATGGCTATATAAATAGTTGAGCTTT
CCACGATCGCTGCGATAATGATGTAGTTAAAGGGCACCTTGCGTCCTAGC
TTGGTCCACGATAAAGTGGCGACTGCGAAAAAGGTACACAGAAGCCACCA
GCCGTAGCGCTCCTCCGATCTGCTGTGGCTCAGCATATGGGTGTAACCTA
TAATGATCCACTGTGTCAATGCGATGGCGGCCAGGATCACACTAAGTCCG
TATATCTTGGCCGCATGACTGATGCTCTCATCCGGTGGCTCGCCATAGAC
CTCCTGATCGATGTTCCGAAAAGTGTTTTTTTGAATACTTGGCATGTCGA
CTGATAACT
BS06010.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:16:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-PA | 729 | CG9483-RA | 1..729 | 745..17 | 3645 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 12:51:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-RA | 920 | CG9483-RA | 101..830 | 745..16 | 3650 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 12:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8866867..8867596 | 745..16 | 3650 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 12:50:59 has no hits.
BS06010.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:28:28 Download gff for
BS06010.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-PA | 1..729 | 17..745 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:03:10 Download gff for
BS06010.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-PA | 1..729 | 17..745 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:47:12 Download gff for
BS06010.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 95..839 | 8..752 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:54:45 Download gff for
BS06010.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 95..839 | 8..752 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:54:45 Download gff for
BS06010.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8866861..8867605 | 8..752 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:47:12 Download gff for
BS06010.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8866861..8867605 | 8..752 | 99 | | Minus |
BS06010.5prime Sequence
759 bp (704 high quality bases) assembled on 2005-12-03
> BS06010.5prime
GAAGTTATCAGTCGACATGCCAAGTATTCAAAAAAACACTTTTCGGAACA
TCGATCAGGAGGTCTATGGCGAGCCACCGGATGAGAGCATCAGTCATGCG
GCCAAGATATACGGACTTAGTGTGATCCTGGCCGCCATCGCATTGACACA
GTGGATCATTATAGGTTACACCCATATGCTGAGCCACAGCAGATCGGAGG
AGCGCTACGGCTGGTGGCTTCTGTGTACCTTTTTCGCAGTCGCCACTTTA
TCGTGGACCAAGCTAGGACGCAAGGTGCCCTTTAACTACATCATTATCGC
AGCGATCGTGGAAAGCTCAACTATTTATATAGCCATGGAACAGAAGCACA
ATGAGAATAGACTCGTCAACTTCTACGCCGGCATTGTAGTGGTTGCCTTG
ATGTTGGCCTCGATATTTTGGGGCGCCTACTTTCCCATGTTCATTGTTCC
CGGTGATCTGCTGCTCAGCTGTTTGGTGGCAATAGCCAACATTATGATGA
TCATATTCTTTATCAATGTCCTATTTATCAACTACCAGGGAATATATTTT
GCGGTTCGGAACACATTCGCCCTGGTGGCCGTCTGCATGGTGATGTACAC
GGCTACCATAATCCATGATCGCCAGTTCGATGTGCCCAAGAACGAGTACT
TGTTCCTCAGTGTCCTGCAGTTTTTCTCCTACATGATCCTGCACGAACGC
ATCCTGGCCATATCCTTTACAAGTGCGCTCAAAACAAGTTGTTAAAAGCT
TTCTAGACC
BS06010.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:16:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-PA | 729 | CG9483-RA | 1..729 | 17..745 | 3645 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:48:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-RA | 920 | CG9483-RA | 101..830 | 17..746 | 3650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:48:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8866867..8867596 | 17..746 | 3650 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 14:48:16 has no hits.
BS06010.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:28:30 Download gff for
BS06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-PA | 1..729 | 17..745 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:03:11 Download gff for
BS06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-PA | 1..729 | 17..745 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:59:44 Download gff for
BS06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 95..839 | 10..754 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:08:02 Download gff for
BS06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 95..839 | 10..754 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:08:02 Download gff for
BS06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8866861..8867605 | 10..754 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:59:44 Download gff for
BS06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8866861..8867605 | 10..754 | 99 | | Plus |
BS06010.complete Sequence
761 bp (761 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635315
> BS06010.complete
GAAGTTATCAGTCGACATGCCAAGTATTCAAAAAAACACTTTTCGGAACA
TCGATCAGGAGGTCTATGGCGAGCCACCGGATGAGAGCATCAGTCATGCG
GCCAAGATATACGGACTTAGTGTGATCCTGGCCGCCATCGCATTGACACA
GTGGATCATTATAGGTTACACCCATATGCTGAGCCACAGCAGATCGGAGG
AGCGCTACGGCTGGTGGCTTCTGTGTACCTTTTTCGCAGTCGCCACTTTA
TCGTGGACCAAGCTAGGACGCAAGGTGCCCTTTAACTACATCATTATCGC
AGCGATCGTGGAAAGCTCAACTATTTATATAGCCATGGAACAGAAGCACA
ATGAGAATAGACTCGTCAACTTCTACGCCGGCATTGTAGTGGTTGCCTTG
ATGTTGGCCTCGATATTTTGGGGCGCCTACTTTCCCATGTTCATTGTTCC
CGGTGATCTGCTGCTCAGCTGTTTGGTGGCAATAGCCAACATTATGATGA
TCATATTCTTTATCAATGTCCTATTTATCAACTACCAGGGAATATATTTT
GCGGTTCGGAACACATTCGCCCTGGTGGCCGTCTGCATGGTGATGTACAC
GGCTACCATAATCCATGATCGCCAGTTCGATGTGCCCAAGAACGAGTACT
TGTTCCTCAGTGTCCTGCAGTTTTTCTCCTACATGATCCTGCACGAACGC
ATCCTGGCCATATCCTTTACAAGTGCGCTCAAAACAAGTTGTTAAAAGCT
TTCTAGACCAT
BS06010.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:31:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-RA | 729 | CG9483-PA | 1..729 | 17..745 | 3645 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:31:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-RA | 920 | CG9483-RA | 101..830 | 17..746 | 3650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:31:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8866867..8867596 | 17..746 | 3650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:31:48 has no hits.
BS06010.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:18:53 Download gff for
BS06010.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 1..729 | 17..745 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:59:51 Download gff for
BS06010.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 95..839 | 10..754 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:39 Download gff for
BS06010.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 101..827 | 17..743 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:18:53 Download gff for
BS06010.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 95..839 | 10..754 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:13:44 Download gff for
BS06010.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 101..827 | 17..743 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:13:44 Download gff for
BS06010.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8866867..8867593 | 17..743 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:39 Download gff for
BS06010.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8866867..8867593 | 17..743 | 100 | | Plus |
BS06010.pep Sequence
Translation from 16 to 744
> BS06010.pep
MPSIQKNTFRNIDQEVYGEPPDESISHAAKIYGLSVILAAIALTQWIIIG
YTHMLSHSRSEERYGWWLLCTFFAVATLSWTKLGRKVPFNYIIIAAIVES
STIYIAMEQKHNENRLVNFYAGIVVVALMLASIFWGAYFPMFIVPGDLLL
SCLVAIANIMMIIFFINVLFINYQGIYFAVRNTFALVAVCMVMYTATIIH
DRQFDVPKNEYLFLSVLQFFSYMILHERILAISFTSALKTSC*
BS06010.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:53:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-PA | 242 | CG9483-PA | 1..242 | 1..242 | 1247 | 100 | Plus |
