Clone Sequence Records
BS06077.3prime Sequence
825 bp (824 high quality bases) assembled on 2005-12-03
> BS06077.3prime
ATGGTCTAGAAAGCTTTTAGTTTTTGTTCGAGCCCTTCTTGACGGCCAAG
AGCTCCAGTCGCGTAATAGCATCGTCCAGAAACCTGCGCTGCTCCTGCAG
CTGCGGTAGGAGCTCCTCAGCACTAAGTGGGTGAGTGGGCTTAGGTGTTG
CCAAGCCCGTTGCAGCTGATTTTGCGGATTCAGTCCAACGACTCCGCAGA
CCTGATACTCCTATGGATGGCCTAAGCATGTCCAGCACTCTTTTAATGAT
AGAGGGACTGGAATCCTGCTGCGGATCCGGGGAATGATCCTGCTGGTGGT
GGTTATGTTGCTGGTCGCTGGCCACACTGCCCTGTGGAAACTCTGGCATG
GTCAGCAAGGGTCCCCACAAAAAGGAACCTAATCCGGGGCCAGCCGGCGA
TGCGCCTTCCGACGAGTGTCCTTCCAGTTGCTTCCCTTGGGAGGCAAAGC
GTCCGTCGAGCAGCTCAAGTTGTCGTTTCAAATCATCCAATTTATGCTGC
AGGTGTTCAAAGTCAGCCGTTAGATTGATGGCCAGCCTCTGCGTGGTCTC
GCCCTTGGAGATTTCCTCGAGCTTTTCTATCTGAACGCCTATTTGATGAT
CTCTTAGCTGTAGATCTTCCAGCAGAAGTTGAGTTTCCGCTCGAAGCGGC
TGCTCTAAAAAAAGACGTGCGATCTCCGCCTGCAATAGCTGTTTGTGGGT
GCGCAGCGCACTTAGCTCCAGTTCCTGAGGATTCCCAAGATTCGAACGGA
CCAGAACTGATCCCAGGATCATAAGCAAACACACAAAGACTTCTGAACGC
GAGCGAAGCATGTCGACTGATAACT
BS06077.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:18:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-PA | 795 | CG4194-RA | 1..795 | 811..17 | 3975 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:17:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-RA | 1097 | CG4194-RA | 16..812 | 811..15 | 3985 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:17:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2068607..2069403 | 811..15 | 3985 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 19:17:26 has no hits.
BS06077.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:30:29 Download gff for
BS06077.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-PA | 1..795 | 17..811 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:05:52 Download gff for
BS06077.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-PA | 1..795 | 17..811 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:16:52 Download gff for
BS06077.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 2..812 | 15..822 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:35:08 Download gff for
BS06077.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 2..812 | 15..822 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:35:08 Download gff for
BS06077.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2068593..2069403 | 15..822 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:16:52 Download gff for
BS06077.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1962626..1963436 | 15..822 | 99 | | Minus |
BS06077.5prime Sequence
825 bp (741 high quality bases) assembled on 2005-12-03
> BS06077.5prime
GAAGTTATCAGTCGACATGCTTCGCTCGCGTTCAGAAGTCTTTGTGTGTT
TGCTTATGATCCTGGGATCAGTTCTGGTCCGTTCGAATCTTGGGAATCCT
CAGGAACTGGAGCTAAGTGCGCTGCGCACCCACAAACAGCTATTGCAGGC
GGAGATCGCACGTCTTTTTTTAGAGCAGCCGCTTCGAGCGGAAACTCAAC
TTCTGCTGGAAGATCTACAGCTAAGAGATCATCAAATAGGCGTTCAGATA
GAAAAGCTCGAGGAAATCTCCAAGGGCGAGACCACGCAGAGGCTGGCCAT
CAATCTAACGGCTGACTTTGAACACCTGCAGCATAAATTGGATGATTTGA
AACGACAACTTGAGCTGCTCGACGGACGCTTTGCCTCCCAAGGGAAGCAA
CTGGAAGGACACTCGTCGGAAGGCGCATCGCCGGCTGGCCCCGGATTAGG
TTCCTTTTTGTGGGGACCCTTGCTGACCATGCCAGAGTTTCCACAGGGCA
GTGTGGCCAGCGACCAGCAACATAACCACCACCAGCAGGATCATTCCCCG
GATCCGCAGCAGGATTCCAGTCCCTCTATCATTAAAAGAGTGCTGGACAT
GCTTAGGCCATCCATAGGAGTATCAGGTCTGCGGAGTCGTTGGACTGAAT
CCGCAAAATCAGCTGCAACGGGCTTGGCAACACCTAAGCCCACTCACCCA
CTTAGTGCTGAGGAGCTCCTACCGCAGCTGCAGGAGCAGCGCAGGTTTCT
GGACGATGCTATTACGCGACTGGAGCTCTTGGCCGTCAAGAAGGGCTCGA
ACAAAAACTAAAAGCTTTCTAGACC
BS06077.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:18:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-PA | 795 | CG4194-RA | 1..795 | 17..811 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 02:53:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-RA | 1097 | CG4194-RA | 16..812 | 17..813 | 3985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 02:53:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2068607..2069403 | 17..813 | 3985 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 02:53:26 has no hits.
BS06077.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:30:30 Download gff for
BS06077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-PA | 1..795 | 17..811 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:05:54 Download gff for
BS06077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-PA | 1..795 | 17..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 04:54:51 Download gff for
BS06077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 2..812 | 6..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:39:56 Download gff for
BS06077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 2..812 | 6..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:39:56 Download gff for
BS06077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2068593..2069403 | 6..813 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 04:54:51 Download gff for
BS06077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1962626..1963436 | 6..813 | 99 | | Plus |
BS06077.complete Sequence
827 bp (827 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635340
> BS06077.complete
GAAGTTATCAGTCGACATGCTTCGCTCGCGTTCAGAAGTCTTTGTGTGTT
TGCTTATGATCCTGGGATCAGTTCTGGTCCGTTCGAATCTTGGGAATCCT
CAGGAACTGGAGCTAAGTGCGCTGCGCACCCACAAACAGCTATTGCAGGC
GGAGATCGCACGTCTTTTTTTAGAGCAGCCGCTTCGAGCGGAAACTCAAC
TTCTGCTGGAAGATCTACAGCTAAGAGATCATCAAATAGGCGTTCAGATA
GAAAAGCTCGAGGAAATCTCCAAGGGCGAGACCACGCAGAGGCTGGCCAT
CAATCTAACGGCTGACTTTGAACACCTGCAGCATAAATTGGATGATTTGA
AACGACAACTTGAGCTGCTCGACGGACGCTTTGCCTCCCAAGGGAAGCAA
CTGGAAGGACACTCGTCGGAAGGCGCATCGCCGGCTGGCCCCGGATTAGG
TTCCTTTTTGTGGGGACCCTTGCTGACCATGCCAGAGTTTCCACAGGGCA
GTGTGGCCAGCGACCAGCAACATAACCACCACCAGCAGGATCATTCCCCG
GATCCGCAGCAGGATTCCAGTCCCTCTATCATTAAAAGAGTGCTGGACAT
GCTTAGGCCATCCATAGGAGTATCAGGTCTGCGGAGTCGTTGGACTGAAT
CCGCAAAATCAGCTGCAACGGGCTTGGCAACACCTAAGCCCACTCACCCA
CTTAGTGCTGAGGAGCTCCTACCGCAGCTGCAGGAGCAGCGCAGGTTTCT
GGACGATGCTATTACGCGACTGGAGCTCTTGGCCGTCAAGAAGGGCTCGA
ACAAAAACTAAAAGCTTTCTAGACCAT
BS06077.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:12:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-RA | 795 | CG4194-PA | 1..795 | 17..811 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:12:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-RA | 1097 | CG4194-RA | 16..812 | 17..813 | 3985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:12:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2068607..2069403 | 17..813 | 3985 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:12:55 has no hits.
BS06077.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:18:36 Download gff for
BS06077.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 1..795 | 17..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:59:34 Download gff for
BS06077.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 1..810 | 7..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:50:57 Download gff for
BS06077.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 16..801 | 17..802 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:18:36 Download gff for
BS06077.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 1..797 | 17..813 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:13:29 Download gff for
BS06077.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 16..801 | 17..802 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:13:29 Download gff for
BS06077.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2068607..2069392 | 17..802 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:57 Download gff for
BS06077.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1962640..1963425 | 17..802 | 100 | | Plus |
BS06077.pep Sequence
Translation from 16 to 810
> BS06077.pep
MLRSRSEVFVCLLMILGSVLVRSNLGNPQELELSALRTHKQLLQAEIARL
FLEQPLRAETQLLLEDLQLRDHQIGVQIEKLEEISKGETTQRLAINLTAD
FEHLQHKLDDLKRQLELLDGRFASQGKQLEGHSSEGASPAGPGLGSFLWG
PLLTMPEFPQGSVASDQQHNHHQQDHSPDPQQDSSPSIIKRVLDMLRPSI
GVSGLRSRWTESAKSAATGLATPKPTHPLSAEELLPQLQEQRRFLDDAIT
RLELLAVKKGSNKN*
BS06077.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:53:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-PA | 264 | CG4194-PA | 1..264 | 1..264 | 1334 | 100 | Plus |
