Clone BS06102 Report

Search the DGRC for BS06102

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:61
Well:2
Vector:pDNR-Dual
Associated Gene/TranscriptCG11842-RA
Protein status:BS06102.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06102.3prime Sequence

914 bp (787 high quality bases) assembled on 2005-12-03

> BS06102.3prime
ATGGTCTAGAAAGCTTCTAATTTTTGGCCAGCTGCTGCTTAATCCAGTCC
AGGTAGAAGTGAACCCGTGTGTACATCGCGGGAAGATCGGGTGTGTCGCA
GGCCACTCCGATGGATGTGATACCCATCACATGGTACATGCAGGGGTAGT
CCATGTGATAGATGAGCACCGGTCCGCCGGAATCGCCGTTGCAGGTGTCC
TTGTGCTCGTTGGACCCGATGCACAGTTGGGTGGTAGCATTATATCCCTC
GGGTAGCTCATCATTTCTATCCGCCGTAATCCTGCAGCGCGTTCCATAGT
TGTAGAGCTTCACTTTCTGTAGCTTTTTGTTCTCCGTCCTGGGCACGATC
TCCAGCTGACCCCAACCGATGGCTATGAAGGAGGTCCCCAATCGCCCATC
GTCGAAGGGTAGACAGGCCGGATGCTTGTAATCGTTGAAGGTTACGGGTC
GACTCAATCGTACCACGGAAATGTCGTTGTAAATCGCCGGGTAGCTAAAT
TCGGGGTGCGCGGTGAAGTCCTTCACATCGAAGTCCTCCGGATCCGCATC
GTCGTTGTTGGTGTCGAATTCCAGGTCCCCGAGGCGCGCGATGTTCACTG
ATCCTTGTGGTGAGTAGTGGCAATGCGCTGCGGTGAGCACATGTCTGTCG
CTGATAAGTGTTCCGCCACAGAACCATTCCACCTCGCCATTCTCATCTTT
GTGTCCCAGGCGCGCAGCATGCGGGAACTCCTTGGGCACGGCGGGTCCTC
CGCCGATGATGAGCGGCGCATAGCTAGTGCATTTGTCCAGGGTCTTGTAG
ATAATCGGAGCGTTCTCGATCAGAAAGCTGAACTCGGACGTCTCCTCCCA
AACGCTTCTCTTGTANGCAGTGCACGTCCTGGCTATATCCGAATCCTGAG
CTGACGCCCATGCG

BS06102.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:18:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG11842-PA 960 CG11842-RA 63..960 914..17 4471 99.8 Minus
CG8299-PA 783 CG8299-RA 615..647 203..171 140 96.9 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:57:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG11842-RA 1118 CG11842-RA 84..983 914..15 4489 99.9 Minus
CG11841-RA 1076 CG11841-RA 756..869 230..117 225 80.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:57:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29053188..29053778 605..15 2955 100 Minus
3R 32079331 3R 29052852..29053122 876..606 1344 99.6 Minus
3R 32079331 3R 29051947..29052060 230..117 225 79.8 Minus
3R 32079331 3R 29052763..29052800 914..877 190 100 Minus
Blast to na_te.dros performed on 2015-02-10 21:57:07 has no hits.

BS06102.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:31:09 Download gff for BS06102.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11842-PA 63..960 17..914 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:06:48 Download gff for BS06102.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11842-PA 63..960 17..914 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:17:48 Download gff for BS06102.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11842-RA 84..989 7..914 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:56:14 Download gff for BS06102.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11842-RA 84..989 7..914 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:56:14 Download gff for BS06102.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 29052763..29052800 877..914 100 -> Minus
3R 29052852..29053122 606..876 99 -> Minus
3R 29053188..29053784 7..605 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:17:48 Download gff for BS06102.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24878485..24878522 877..914 100 -> Minus
arm_3R 24878574..24878844 606..876 99 -> Minus
arm_3R 24878910..24879506 7..605 99   Minus

BS06102.5prime Sequence

927 bp (777 high quality bases) assembled on 2005-12-03

> BS06102.5prime
GAAGTTATCAGTCGACATGAGCAGCGCGATCTTCGCCAAGATTGTCCAGC
TGGGAGCAGTATTGCTGGTTTCATTCGTCGCATGGGCGTCAGCTCAGGAT
TCGGATATAGCCAGGACGTGCACTGCCTACAAGAGAAGCGTTTGGGAGGA
GACGTCCGAGTTCAGCTTTCTGATCGAGAACGCTCCGATTATCTACAAGA
CCCTGGACAAATGCACTAGCTATGCGCCGCTCATCATCGGCGGAGGACCC
GCCGTGCCCAAGGAGTTCCCGCATGCTGCGCGCCTGGGACACAAAGATGA
GAATGGCGAGGTGGAATGGTTCTGTGGCGGAACACTTATCAGCGACAGAC
ATGTGCTCACCGCAGCGCATTGCCACTACTCACCACAAGGATCAGTGAAC
ATCGCGCGCCTCGGGGACCTGGAATTCGACACCAACAACGACGATGCGGA
TCCGGAGGACTTCGATGTGAAGGACTTCACCGCGCACCCCGAATTTAGCT
ACCCGGCGATTTACAACGACATTTCCGTGGTACGATTGAGTCGACCCGTA
ACCTTCAACGATTACAAGCATCCGGCCTGTCTACCCTTCGACGATGGGCG
ATTGGGGACCTCCTTCATAGCCATCGGTTGGGGTCAGCTGGAGATCGTGC
CCAGGACGGAGAACAAAAAGCTACAGAAAGTGAAGCTCTACAACTATGGA
ACGCGCTGCAGGATTACGGCGGATAGAAATGATGAGCTACCCGAGGGATA
TAATGCTACCACCCAACTGTGCATCGGGTCCAACGAGCACAAAGACACCT
GCAACGGCGATTCCGGCGGACCGGTGCTCATCTATCACATGGACTACCCC
TGCATGTACCATGTGATGGGTATCACATCCATCGGAGTGGCCTGCGACAC
ACCCGATCTTCCCGCGATGTACACACG

BS06102.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:18:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG11842-PA 960 CG11842-RA 1..911 17..927 4530 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:41:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG11842-RA 1118 CG11842-RA 22..932 17..927 4540 99.9 Plus
CG11841-RA 1076 CG11841-RA 756..869 763..876 210 80 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:41:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29053188..29053727 388..927 2685 99.8 Plus
3R 32079331 3R 29052852..29053122 117..387 1355 100 Plus
3R 32079331 3R 29052701..29052800 17..116 500 100 Plus
3R 32079331 3R 29051947..29052060 763..876 210 78.9 Plus
Blast to na_te.dros performed on 2015-02-11 10:41:32 has no hits.

BS06102.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:31:10 Download gff for BS06102.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11842-PA 1..911 17..927 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:06:50 Download gff for BS06102.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11842-PA 1..911 17..927 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:24:41 Download gff for BS06102.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11842-RA 16..932 9..927 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:28:43 Download gff for BS06102.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11842-RA 16..932 9..927 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:28:43 Download gff for BS06102.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29052852..29053122 117..387 100 -> Plus
3R 29052695..29052800 9..116 96 -> Plus
3R 29053188..29053727 388..927 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:24:41 Download gff for BS06102.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24878417..24878522 9..116 96 -> Plus
arm_3R 24878574..24878844 117..387 100 -> Plus
arm_3R 24878910..24879449 388..927 99   Plus

BS06102.complete Sequence

992 bp (992 high quality bases) assembled on 2005-12-09

> BS06102.complete
GAAGTTATCAGTCGACATGAGCAGCGCGATCTTCGCCAAGATTGTCCAGC
TGGGAGCAGTATTGCTGGTTTCATTCGTCGCATGGGCGTCAGCTCAGGAT
TCGGATATAGCCAGGACGTGCACTGCCTACAAGAGAAGCGTTTGGGAGGA
GACGTCCGAGTTCAGCTTTCTGATCGAGAACGCTCCGATTATCTACAAGA
CCCTGGACAAATGCACTAGCTATGCGCCGCTCATCATCGGCGGAGGACCC
GCCGTGCCCAAGGAGTTCCCGCATGCTGCGCGCCTGGGACACAAAGATGA
GAATGGCGAGGTGGAATGGTTCTGTGGCGGAACACTTATCAGCGACAGAC
ATGTGCTCACCGCAGCGCATTGCCACTACTCACCACAAGGATCAGTGAAC
ATCGCGCGCCTCGGGGACCTGGAATTCGACACCAACAACGACGATGCGGA
TCCGGAGGACTTCGATGTGAAGGACTTCACCGCGCACCCCGAATTTAGCT
ACCCGGCGATTTACAACGACATTTCCGTGGTACGATTGAGTCGACCCGTA
ACCTTCAACGATTACAAGCATCCGGCCTGTCTACCCTTCGACGATGGGCG
ATTGGGGACCTCCTTCATAGCCATCGGTTGGGGTCAGCTGGAGATCGTGC
CCAGGACGGAGAACAAAAAGCTACAGAAAGTGAAGCTCTACAACTATGGA
ACGCGCTGCAGGATTACGGCGGATAGAAATGATGAGCTACCCGAGGGATA
TAATGCTACCACCCAACTGTGCATCGGGTCCAACGAGCACAAGGACACCT
GCAACGGCGATTCCGGCGGACCGGTGCTCATCTATCACATGGACTACCCC
TGCATGTACCATGTGATGGGTATCACATCCATCGGAGTGGCCTGCGACAC
ACCCGATCTTCCCGCGATGTACACACGGGTTCACTTCTACCTGGACTGGA
TTAAGCAGCAGCTGGCCAAAAATTAGAAGCTTTCTAGACCAT

BS06102.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:42:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG11842-RA 960 CG11842-PA 1..960 17..976 4800 100 Plus
CG11841-RA 960 CG11841-PA 741..854 763..876 225 79.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:42:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG11842-RA 1118 CG11842-RA 22..983 17..978 4810 100 Plus
CG11841-RA 1076 CG11841-RA 756..869 763..876 225 79.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:42:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29053188..29053778 388..978 2955 100 Plus
3R 32079331 3R 29052852..29053122 117..387 1355 100 Plus
3R 32079331 3R 29052701..29052800 17..116 500 100 Plus
3R 32079331 3R 29051947..29052060 763..876 225 79.8 Plus
Blast to na_te.dros performed on 2014-11-27 15:42:44 has no hits.

BS06102.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:18:14 Download gff for BS06102.complete
Subject Subject Range Query Range Percent Splice Strand
CG11842-RA 1..960 17..976 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:59:08 Download gff for BS06102.complete
Subject Subject Range Query Range Percent Splice Strand
CG11842-RA 16..989 9..986 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:04 Download gff for BS06102.complete
Subject Subject Range Query Range Percent Splice Strand
CG11842-RA 22..981 17..976 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:18:14 Download gff for BS06102.complete
Subject Subject Range Query Range Percent Splice Strand
CG11842-RA 16..989 9..986 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:14:36 Download gff for BS06102.complete
Subject Subject Range Query Range Percent Splice Strand
CG11842-RA 22..981 17..976 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:14:36 Download gff for BS06102.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29052701..29052800 17..116 100 -> Plus
3R 29052852..29053122 117..387 100 -> Plus
3R 29053188..29053776 388..976 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:04 Download gff for BS06102.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24878423..24878522 17..116 100 -> Plus
arm_3R 24878574..24878844 117..387 100 -> Plus
arm_3R 24878910..24879498 388..976 100   Plus

BS06102.pep Sequence

Translation from 16 to 975

> BS06102.pep
MSSAIFAKIVQLGAVLLVSFVAWASAQDSDIARTCTAYKRSVWEETSEFS
FLIENAPIIYKTLDKCTSYAPLIIGGGPAVPKEFPHAARLGHKDENGEVE
WFCGGTLISDRHVLTAAHCHYSPQGSVNIARLGDLEFDTNNDDADPEDFD
VKDFTAHPEFSYPAIYNDISVVRLSRPVTFNDYKHPACLPFDDGRLGTSF
IAIGWGQLEIVPRTENKKLQKVKLYNYGTRCRITADRNDELPEGYNATTQ
LCIGSNEHKDTCNGDSGGPVLIYHMDYPCMYHVMGITSIGVACDTPDLPA
MYTRVHFYLDWIKQQLAKN*

BS06102.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:09:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG11842-PA 319 CG11842-PA 1..319 1..319 1731 100 Plus
CG11841-PA 319 CG11841-PA 34..316 35..318 967 61.6 Plus
CG11843-PB 316 CG11843-PB 2..314 8..317 814 50 Plus
CG11843-PA 316 CG11843-PA 2..314 8..317 814 50 Plus
CG4927-PC 362 CG4927-PC 103..356 71..313 455 38.5 Plus