Clone BS06103 Report

Search the DGRC for BS06103

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:61
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG14629-RA
Protein status:BS06103.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS06103.3prime Sequence

950 bp (826 high quality bases) assembled on 2005-12-03

> BS06103.3prime
ATGGTCTAGAAAGCTTTTAGGCCAGTCGGGCGAGGAAAGTGGCCATTAGC
AGGCTCGCAGAGGTCCAGGTGAGATGAAGGGATACGGATGAGCCGGACTG
GGATCCACTGGTCAAGGGCAGGGCTCTGCGGTGCTGCAGCTTGACCCTGT
CGATGTGGGGCTGGCAGGAGGACTCCTTCCTCACGTATCGAAACATGGAC
TCCACGATATTGCTGGGAGTGATCGTATCGCACTTCTCCAGCAGACTGAC
GGTGCACGTCTCGAATGCGTAGAGGTCGACGCACTGCTTCGGACCCAAGA
CCAGCTGGGGCAGATCCCACTCCGGGCTAATCGACTTGGGCAGATATCCG
GCGAAGGAAGAGTTCAGGCAATTGGCGATGCCTTCGCGACTCTGCTGCAG
GCACTCCGGGCCCTCTTCGGCGATAAAGAGCGCAATCTGGTCTCCGTTCT
TGTAGCATATGAACTCCAGCAGCTTGTCCGCAATCCTCTGCAGCACCGCG
TTGTGGGTCTTCTCATCGGTGGTCAGGCAGGGCAGGATCGCGTCGTTGAA
GTTCTTCAGACAGGTCTTGGCCTGCGGCAATCGGAGGCAATACTTCTCGA
AGACCACGTCCAGGTCGCCCTTGGGACTCGCCTCCTCGATCTCCGCCTGG
ATCTCCGTCATATTGGCCAATCCGGAGAGGCATTCTGCGAGGTGAATGCC
CGCATCCTCGATGGACTTGCTCAGGGCAGAGGCGTTTACAGATCCTTTCG
GCAAATGGTCATTGGCCTTCTCGCACTTCGACTGCAGCCACTTTTGGAAG
TCGGCCAAGGTCACATTGGTGTTTTGCAGGCCTTGGGGCAGATAGTTTGA
CCTTAGCTGGGTCACATCCACGTTCTCCAGCAGCGACGGATCCAGGGGAC
CCAGCCAATCCACAGATCCAAGCACGGCGTGAACCGCGAAGGCCAGTTAA

BS06103.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:18:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-PA 960 CG14629-RA 80..960 897..17 4330 99.6 Minus
CG14629-PA 960 CG14629-RA 30..70 947..907 205 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:08:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-RA 1107 CG14629-RA 45..975 947..17 4550 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 17:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1051569..1052499 947..17 4535 99.1 Minus
Blast to na_te.dros performed on 2015-01-31 17:08:04 has no hits.

BS06103.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:31:11 Download gff for BS06103.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-PA 29..960 17..948 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:06:51 Download gff for BS06103.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-PA 29..960 17..948 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:30:41 Download gff for BS06103.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 42..979 11..950 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:47:28 Download gff for BS06103.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 42..979 11..950 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:47:28 Download gff for BS06103.3prime
Subject Subject Range Query Range Percent Splice Strand
X 1051566..1052503 11..950 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:30:41 Download gff for BS06103.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 945599..946536 11..950 98   Minus

BS06103.5prime Sequence

778 bp (777 high quality bases) assembled on 2005-12-03

> BS06103.5prime
GAAGTTATCAGTCGACATGTCGAGCTGGTCGCTTTGTCCGCTTTTACTGG
CCTTCGCGGTTCACGCCGTGCTTGGATCTGTGGATTTGGCTGGTTCCCTG
GATCCGTCGCTGCTGGAGAACGTGGATGTGGACCAGCTAAGGTCAAACTA
TCTGCCCCAAGGCCTGCAAAACACCAATGTGACCTTGGCCGACTTCCAAA
AGTGGCTGCAGTCGAAGTGCGAGAAGGCCAATGACCATTTGCCGAAAGGA
TCTGTTAACGCCTCTGCCCTGAGCAAGTCCATCGAGGATGCGGGCATTCA
CCTCGCAGAATGCCTCTCCGGATTGGCCAATATGACGGAGATCCAGGCGG
AGATCGAGGAGGCGAGTCCCAAGGGCGACCTGGACGTGGTCTTCGAGAAG
TATTGCCTCCGATTGCCGCAGGCCAAGACCTGTCTGAAGAACTTCAACGA
CGCGATCCTGCCCTGCCTGACCACCGATGAGAAGACCCACAACGCGGTGC
TGCAGAGGATTGCGGACAAGCTGCTGGAGTTCATATGCTACAAGAACGGA
GACCAGATTGCGCTCTTTATCGCCGAAGAGGGCCCGGAGTGCCTGCAGCA
GAGTCGCGAAGGCATCGCCAATTGCCTGAACTCTTCCTTCGCCGGATATC
TGCCCAAGTCGATTAGCCCGGAGTGGGATCTGCCCCAGCTGGTCTTGGGT
CCGAAGCAGTGCGTCGACCTCTACGCATTCGAGACGTGCACCGTCAGTCT
GCTGGAGAAGTGCGATACGATCACTCCC

BS06103.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:18:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-PA 960 CG14629-RA 1..762 17..778 3810 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:34:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-RA 1107 CG14629-RA 16..777 17..778 3810 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:34:32
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1051540..1052301 17..778 3810 100 Plus
Blast to na_te.dros performed on 2015-02-11 09:34:32 has no hits.

BS06103.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:31:12 Download gff for BS06103.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-PA 1..762 17..778 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:06:52 Download gff for BS06103.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-PA 1..762 17..778 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:14:55 Download gff for BS06103.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 7..777 10..778 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:06:41 Download gff for BS06103.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 7..777 10..778 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:06:41 Download gff for BS06103.5prime
Subject Subject Range Query Range Percent Splice Strand
X 1051531..1052301 10..778 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:14:55 Download gff for BS06103.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 945564..946334 10..778 99   Plus

BS06103.complete Sequence

992 bp (992 high quality bases) assembled on 2005-12-09

GenBank Submission: FJ635352

> BS06103.complete
GAAGTTATCAGTCGACATGTCGAGCTGGTCGCTTTGTCCGCTTTTACTGG
CCTTCGCGGTTCACGCCGTGCTTGGATCTGTGGATTTGGCTGGTTCCCTG
GATCCGTCGCTGCTGGAGAACGTGGATGTGGACCAGCTAAGGTCAAACTA
TCTGCCCCAAGGCCTGCAAAACACCAATGTGACCTTGGCCGACTTCCAAA
AGTGGCTGCAGTCGAAGTGCGAGAAGGCCAATGACCATTTGCCGAAAGGA
TCTGTTAACGCCTCTGCCCTGAGCAAGTCCATCGAGGATGCGGGCATTCA
CCTCGCAGAATGCCTCTCCGGATTGGCCAATATGACGGAGATCCAGGCGG
AGATCGAGGAGGCGAGTCCCAAGGGCGACCTGGACGTGGTCTTCGAGAAG
TATTGCCTCCGATTGCCGCAGGCCAAGACCTGTCTGAAGAACTTCAACGA
CGCGATCCTGCCCTGCCTGACCACCGATGAGAAGACCCACAACGCGGTGC
TGCAGAGGATTGCGGACAAGCTGCTGGAGTTCATATGCTACAAGAACGGA
GACCAGATTGCGCTCTTTATCGCCGAAGAGGGCCCGGAGTGCCTGCAGCA
GAGTCGCGAAGGCATCGCCAATTGCCTGAACTCTTCCTTCGCCGGATATC
TGCCCAAGTCGATTAGCCCGGAGTGGGATCTGCCCCAGCTGGTCTTGGGT
CCGAAGCAGTGCGTCGACCTCTACGCATTCGAGACGTGCACCGTCAGTCT
GCTGGAGAAGTGCGATACGATCACTCCCAGCAATATCGTGGAGTCCATGT
TTCGATACGTGAGGAAGGAGTCCTCCTGCCAGCCCCACATCGACAGGGTC
AAGCTGCAGCACCGCAGAGCCCTGCCCTTGACCAGTGGATCCCAGTCCGG
CTCATCCGTATCCCTTCATCTCACCTGGACCTCTGCGAGCCTGCTAATGG
CCACTTTCCTCGCCCGACTGGCCTAAAAGCTTTCTAGACCAT

BS06103.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:50:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-RA 960 CG14629-PA 1..960 17..976 4800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-RA 1107 CG14629-RA 16..975 17..976 4800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1051540..1052499 17..976 4800 100 Plus
Blast to na_te.dros performed on 2014-11-27 10:50:55 has no hits.

BS06103.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:18:15 Download gff for BS06103.complete
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 1..960 17..976 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:59:09 Download gff for BS06103.complete
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 1..967 15..982 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:22:02 Download gff for BS06103.complete
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 16..973 17..974 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:18:16 Download gff for BS06103.complete
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 1..967 15..982 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:32:23 Download gff for BS06103.complete
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 16..973 17..974 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:32:23 Download gff for BS06103.complete
Subject Subject Range Query Range Percent Splice Strand
X 1051540..1052497 17..974 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:22:02 Download gff for BS06103.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 945573..946530 17..974 100   Plus

BS06103.pep Sequence

Translation from 16 to 975

> BS06103.pep
MSSWSLCPLLLAFAVHAVLGSVDLAGSLDPSLLENVDVDQLRSNYLPQGL
QNTNVTLADFQKWLQSKCEKANDHLPKGSVNASALSKSIEDAGIHLAECL
SGLANMTEIQAEIEEASPKGDLDVVFEKYCLRLPQAKTCLKNFNDAILPC
LTTDEKTHNAVLQRIADKLLEFICYKNGDQIALFIAEEGPECLQQSREGI
ANCLNSSFAGYLPKSISPEWDLPQLVLGPKQCVDLYAFETCTVSLLEKCD
TITPSNIVESMFRYVRKESSCQPHIDRVKLQHRRALPLTSGSQSGSSVSL
HLTWTSASLLMATFLARLA*

BS06103.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:01:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-PA 319 CG14629-PA 1..319 1..319 1652 100 Plus
CG11378-PC 312 CG11378-PC 13..308 17..315 571 40.2 Plus
CG11378-PB 312 CG11378-PB 13..308 17..315 571 40.2 Plus
CG11378-PA 312 CG11378-PA 13..308 17..315 571 40.2 Plus
CG9917-PB 301 CG9917-PB 23..290 32..311 518 37.7 Plus