Clone Sequence Records
BS06117.3prime Sequence
947 bp (891 high quality bases) assembled on 2005-12-03
> BS06117.3prime
ATGGTCTAGAAAGCTTTCAGGCCGCCGGAGCTGGTGTTGCTTCGCCCTCG
GGAGCTGCTGGTGCAGGAGTGGCGGCCTCGGCGGCTGGAGCTCCTTCCGC
TGGTGGAGCTGCCGCCGGAGTGGCTCCTTCCGCTGCCGCGGCATCCGGTG
CGGGCGTGGCTGCTCCAGTTGCGTCTGCCGCCGCGGGTGGACCCGTGCCG
CCTGGCGGCACCGTTTGCTCCTGCTCGGCAATGGGTTCCGCGGCGTTTTC
CATGCCATTCTCGAACACGGGCTCCGTGGTGCCACCACCATCACCTGGAG
TCGGCGCGCCCTCCGCTTCCTTCTCCTTCGAGACCCCGATTTCCGTTGAA
TTCGAATTGTCAGCTGGCCGTGAATCGCTCTCCACACTTTGCTCTTTGAT
CCCCGTCTCTTGCTTATCCTTCTGGCCCGCGTCGTGGTGGAAGTGATGCA
AGTGCTCGTGGCTGTGTTTCTGGCCATCCCCACTGTCCTCGGCGGGAACG
GCGCACTTCATCTGGTTCTGTTCGCAGATGAAGTACTTCTTCTCCTGGCA
GTTCACGTCCAGGACGACGGTGACATTGGGCCTGATCCTGATCTCCAGGC
AGTCGTCCAGGTTGGATCGTTGAGTCGGCTCCACAATATTGGAGTCGCCC
ATGTAGCGCACCAGTTTACCGCTGCTGATGTACTTGAAGCGCCCCTCCGA
CTGCAGATCGTTGCCACCGAACCAGAAGTCATCGAAGCCCACCTGTGACG
TCACGTAGTGTACCACCGCCTTGAAGTCCTCCATCGTGGACACGTCGGCC
AGGTTGAGGCCCTTGCGCAGGCAGTTGTTCTGGGCCCCGAACCAGTTGAT
CTTTTTGATGCCACATAGAAGCACTTTCCGTTTAGCTCCCTGAGATACGG
TTTGCCACAGGGACCCTTGTCCTTTTTCCTCTTGCTCTGCTTTCTTC
BS06117.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:18:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1656-PA | 987 | lectin-46Ca-RA | 142..987 | 862..17 | 4230 | 100 | Minus |
CG1656-PA | 987 | lectin-46Ca-RA | 61..142 | 942..861 | 360 | 97.5 | Minus |
CG1652-PA | 969 | lectin-46Cb-RA | 514..549 | 466..431 | 155 | 97.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:16:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Ca-RA | 1105 | CG1656-RA | 81..1008 | 942..16 | 4585 | 99.7 | Minus |
lectin-46Cb-RB | 1039 | CG1652-RB | 267..341 | 727..653 | 180 | 82.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:16:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9817602..9818438 | 852..16 | 4185 | 100 | Minus |
2R | 25286936 | 2R | 9817380..9817472 | 942..851 | 385 | 96.8 | Minus |
Blast to na_te.dros performed 2015-02-10 19:16:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6875 | 177..21 | 193 | 59.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2766..2913 | 183..30 | 153 | 57.8 | Minus |
BS06117.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:31:32 Download gff for
BS06117.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1656-PA | 56..987 | 17..947 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:07:19 Download gff for
BS06117.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1656-PA | 56..987 | 17..947 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:16:36 Download gff for
BS06117.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 76..1011 | 13..947 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:34:41 Download gff for
BS06117.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 76..1011 | 13..947 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:34:41 Download gff for
BS06117.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9817375..9817472 | 851..947 | 95 | -> | Minus |
2R | 9817604..9818441 | 13..850 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:16:36 Download gff for
BS06117.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5704880..5704977 | 851..947 | 95 | -> | Minus |
arm_2R | 5705109..5705946 | 13..850 | 99 | | Minus |
BS06117.5prime Sequence
941 bp (765 high quality bases) assembled on 2005-12-03
> BS06117.5prime
GAAGTTATCAGTCGACATGAGGATCCTACCAATTGTGATTCTGACCTTGA
TGACGGTCCATTCCGGCTGCGGAAAGAAGCAGAGCAAGAAGGAAAAGGAC
AAGGGTCCCTGTGGCAAACCGTATCTCAGGGAGCTAAACGGAAAGTGCTT
CTATGTGGGCATCAAAAAGATCAACTGGTTCGGGGCCCAGAACAACTGCC
TGCGCAAGGGCCTCAACCTGGCCGACGTGTCCACGATGGAGGACTTCAAG
GCGGTGGTACACTACGTGACGTCACAGGTGGGCTTCGATGACTTCTGGTT
CGGTGGCAACGATCTGCAGTCGGAGGGGCGCTTCAAGTACATCAGCAGCG
GTAAACTGGTGCGCTACATGGGCGACTCCAATATTGTGGAGCCGACTCAA
CGATCCAACCTGGACGACTGCCTGGAGATCAGGATCAGGCCCAATGTCAC
CGTCGTCCTGGACGTGAACTGCCAGGAGAAGAAGTACTTCATCTGCGAAC
AGAACCAGATGAAGTGCGCCGTTCCCGCCGAGGACAGTGGGGATGGCCAG
AAACACAGCCACGAGCACTTGCATCACTTCCACCACGACGCGGGCCAGAA
GGATAAGCAAGAGACGGGGATCAAAGAGCAAAGTGTGGAGAGCGATTCAC
GGCCAGCTGACAATTCGAATTCAACGGAAATCGGGGTCTCGAAGGAGAAG
GAAGCGGAGGGCGCGCCGACTCCAGGTGATGGTGGTGGCACCACGGAGCC
CGTGTTCGAGAATGGCATGGNAAACGCCGCGGAACCCATTGCCGAGCAGG
AGCAAACGGTGGCGCCAGGCGGCACGGGTCCACCCGCGGCGGCAGACGCA
ACTGGAGCAGCCACGCCCGCACCGGATGCCGCGGCAGCGGAAGGAGCCAC
TCCGGCGGCAGCTCACCAGCGGAAGGAGCTCCAGCCGCCGA
BS06117.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1656-PA | 987 | lectin-46Ca-RA | 1..898 | 17..914 | 4446 | 99.7 | Plus |
CG1652-PA | 969 | lectin-46Cb-RA | 514..549 | 554..589 | 155 | 97.2 | Plus |
CG1656-PA | 987 | lectin-46Ca-RA | 899..926 | 914..941 | 140 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:00:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Ca-RA | 1105 | CG1656-RA | 20..946 | 16..941 | 4584 | 99.7 | Plus |
lectin-46Cb-RB | 1039 | CG1652-RB | 267..341 | 293..367 | 180 | 82.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:00:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9817602..9818376 | 168..941 | 3799 | 99.6 | Plus |
2R | 25286936 | 2R | 9817319..9817472 | 16..169 | 770 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 01:00:08 has no hits.
BS06117.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:31:33 Download gff for
BS06117.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1656-PA | 1..925 | 17..940 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:07:20 Download gff for
BS06117.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1656-PA | 1..925 | 17..940 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 20:53:48 Download gff for
BS06117.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 16..945 | 9..940 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:47:18 Download gff for
BS06117.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 16..945 | 9..940 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:47:18 Download gff for
BS06117.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9817315..9817472 | 9..169 | 98 | -> | Plus |
2R | 9817604..9818375 | 170..940 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 20:53:48 Download gff for
BS06117.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5704820..5704977 | 9..169 | 98 | -> | Plus |
arm_2R | 5705109..5705880 | 170..940 | 99 | | Plus |
BS06117.complete Sequence
1019 bp (1019 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635359
> BS06117.complete
GAAGTTATCAGTCGACATGAGGATCCTACCAATTGTGATTCTGACCTTGA
TGACGGTCCATTCCGGCTGCGGAAAGAAGCAGAGCAAGAAGGAAAAGGAC
AAGGGTCCCTGTGGCAAACCGTATCTCAGGGAGCTAAACGGAAAGTGCTT
CTATGTGGGCATCAAAAAGATCAACTGGTTCGGGGCCCAGAACAACTGCC
TGCGCAAGGGCCTCAACCTGGCCGACGTGTCCACGATGGAGGACTTCAAG
GCGGTGGTACACTACGTGACGTCACAGGTGGGCTTCGATGACTTCTGGTT
CGGTGGCAACGATCTGCAGTCGGAGGGGCGCTTCAAGTACATCAGCAGCG
GTAAACTGGTGCGCTACATGGGCGACTCCAATATTGTGGAGCCGACTCAA
CGATCCAACCTGGACGACTGCCTGGAGATCAGGATCAGGCCCAATGTCAC
CGTCGTCCTGGACGTGAACTGCCAGGAGAAGAAGTACTTCATCTGCGAAC
AGAACCAGATGAAGTGCGCCGTTCCCGCCGAGGACAGTGGGGATGGCCAG
AAACACAGCCACGAGCACTTGCATCACTTCCACCACGACGCGGGCCAGAA
GGATAAGCAAGAGACGGGGATCAAAGAGCAAAGTGTGGAGAGCGATTCAC
GGCCAGCTGACAATTCGAATTCAACGGAAATCGGGGTCTCGAAGGAGAAG
GAAGCGGAGGGCGCGCCGACTCCAGGTGATGGTGGTGGCACCACGGAGCC
CGTGTTCGAGAATGGCATGGAAAACGCCGCGGAACCCATTGCCGAGCAGG
AGCAAACGGTGCCGCCAGGCGGCACGGGTCCACCCGCGGCGGCAGACGCA
ACTGGAGCAGCCACGCCCGCACCGGATGCCGCGGCAGCGGAAGGAGCCAC
TCCGGCGGCAGCTCCACCAGCGGAAGGAGCTCCAGCCGCCGAGGCCGCCA
CTCCTGCACCAGCAGCTCCCGAGGGCGAAGCAACACCAGCTCCGGCGGCC
TGAAAGCTTTCTAGACCAT
BS06117.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:09:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Ca-RA | 987 | CG1656-PA | 1..987 | 17..1003 | 4935 | 100 | Plus |
lectin-46Cb-RB | 969 | CG1652-PB | 262..336 | 293..367 | 180 | 82.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:09:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Ca-RA | 1105 | CG1656-RA | 20..1008 | 16..1004 | 4945 | 100 | Plus |
lectin-46Cb-RB | 1039 | CG1652-RB | 267..341 | 293..367 | 180 | 82.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:08:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9817602..9818438 | 168..1004 | 4185 | 100 | Plus |
2R | 25286936 | 2R | 9817319..9817472 | 16..169 | 770 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 00:09:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6875 | 843..999 | 193 | 59.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2766..2913 | 837..990 | 153 | 57.8 | Plus |
BS06117.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:18:01 Download gff for
BS06117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 1..987 | 17..1003 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:58:53 Download gff for
BS06117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 16..1011 | 9..1007 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:46:25 Download gff for
BS06117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 21..1006 | 17..1002 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:18:01 Download gff for
BS06117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 16..1011 | 9..1007 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:16 Download gff for
BS06117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 21..1006 | 17..1002 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:16 Download gff for
BS06117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9817320..9817472 | 17..169 | 100 | -> | Plus |
2R | 9817604..9818436 | 170..1002 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:46:25 Download gff for
BS06117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5704825..5704977 | 17..169 | 100 | -> | Plus |
arm_2R | 5705109..5705941 | 170..1002 | 100 | | Plus |
BS06117.pep Sequence
Translation from 16 to 1002
> BS06117.pep
MRILPIVILTLMTVHSGCGKKQSKKEKDKGPCGKPYLRELNGKCFYVGIK
KINWFGAQNNCLRKGLNLADVSTMEDFKAVVHYVTSQVGFDDFWFGGNDL
QSEGRFKYISSGKLVRYMGDSNIVEPTQRSNLDDCLEIRIRPNVTVVLDV
NCQEKKYFICEQNQMKCAVPAEDSGDGQKHSHEHLHHFHHDAGQKDKQET
GIKEQSVESDSRPADNSNSTEIGVSKEKEAEGAPTPGDGGGTTEPVFENG
MENAAEPIAEQEQTVPPGGTGPPAAADATGAATPAPDAAAAEGATPAAAP
PAEGAPAAEAATPAPAAPEGEATPAPAA*
BS06117.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:01:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Ca-PA | 328 | CG1656-PA | 1..328 | 1..328 | 1748 | 100 | Plus |
lectin-46Cb-PB | 322 | CG1652-PB | 26..313 | 31..328 | 613 | 46.9 | Plus |
Tm1-PF | 501 | CG4898-PF | 348..461 | 213..328 | 167 | 45.5 | Plus |
CG9134-PC | 188 | CG9134-PC | 54..184 | 37..161 | 149 | 30.3 | Plus |
CG9134-PA | 188 | CG9134-PA | 54..184 | 37..161 | 149 | 30.3 | Plus |