Clone Sequence Records
BS06133.3prime Sequence
579 bp (578 high quality bases) assembled on 2005-12-03
> BS06133.3prime
ATGGTCTAGAAAGCTTCTAGATCTTCTTGTACTCGATGCGCTCCACTTTG
ACCTCGTCGCCGATCAGTTGGTACACGTACGTGACCACCGTGGTGCTCTG
AATGTCCATCAGCACGAACGAAGGCACCACATTGGTGTCCAGTGGGTTGA
AGGCACCCGTGGCCGATCCCGGATTGATGTAGAATTTGTTGCCGTGCTCG
TAGGCCTCGAACTTGTACGTGTGCCCCGTGATCAGGATGTCCACGTCCAG
TTGCCGCTGGATGAGGGCCAGCGCCTCCGGGTCTCCGCGGGGAACCACCT
GGTGGCCGTGGCACAGACCGATCCGGAACTGGCCTACCGTGACCACCTTC
TGCTCCGGATACGTCAGGTTCTCGTCGAAGTCGCCGCGCACTATGTGCAC
ATCATTGGCCAGGGACTTCAGGTAGTCGTAGGACTCCTTGGTGCAGATGT
TTCCGGTGGCCAGGATGTGATGTATGCGGCCCGGCACCAGCAGCTTCTTA
AATTTAGCCGGCAGGCTGCTGCACCGGTGCGGGATGTGCAGGTCGCCGAG
TACCAGAACGAGCATGTCGACTGATAACT
BS06133.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4764-PA | 549 | CG4764-RA | 1..549 | 565..17 | 2745 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:43:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps29-RA | 999 | CG4764-RA | 98..646 | 565..17 | 2745 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:42:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1150863..1151411 | 565..17 | 2745 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:42:58 has no hits.
BS06133.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:00 Download gff for
BS06133.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-PA | 1..549 | 17..565 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:07:58 Download gff for
BS06133.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-PA | 1..549 | 17..565 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:07:27 Download gff for
BS06133.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 98..646 | 17..565 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:00:16 Download gff for
BS06133.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps29-RA | 98..646 | 17..565 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:00:16 Download gff for
BS06133.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1150857..1151411 | 17..571 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:07:27 Download gff for
BS06133.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1150857..1151411 | 17..571 | 99 | | Minus |
BS06133.5prime Sequence
579 bp (578 high quality bases) assembled on 2005-12-03
> BS06133.5prime
GAAGTTATCAGTCGACATGCTCGTTCTGGTACTCGGCGACCTGCACATCC
CGCACCGGTGCAGCAGCCTGCCGGCTAAATTTAAGAAGCTGCTGGTGCCG
GGCCGCATACATCACATCCTGGCCACCGGAAACATCTGCACCAAGGAGTC
CTACGACTACCTGAAGTCCCTGGCCAATGATGTGCACATAGTGCGCGGCG
ACTTCGACGAGAACCTGACGTATCCGGAGCAGAAGGTGGTCACGGTAGGC
CAGTTCCGGATCGGTCTGTGCCACGGCCACCAGGTGGTTCCCCGCGGAGA
CCCGGAGGCGCTGGCCCTCATCCAGCGGCAACTGGACGTGGACATCCTGA
TCACGGGGCACACGTACAAGTTCGAGGCCTACGAGCACGGCAACAAATTC
TACATCAATCCGGGATCGGCCACGGGTGCCTTCAACCCACTGGACACCAA
TGTGGTGCCTTCGTTCGTGCTGATGGACATTCAGAGCACCACGGTGGTCA
CGTACGTGTACCAACTGATCGGCGACGAGGTCAAAGTGGAGCGCATCGAG
TACAAGAAGATCTAGAAGCTTTCTAGACC
BS06133.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:19:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4764-PA | 549 | CG4764-RA | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 11:34:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps29-RA | 999 | CG4764-RA | 98..646 | 17..565 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 11:34:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1150863..1151411 | 17..565 | 2745 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 11:34:16 has no hits.
BS06133.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 08:32:01 Download gff for
BS06133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-PA | 1..549 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 09:07:59 Download gff for
BS06133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-PA | 1..549 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 06:40:20 Download gff for
BS06133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 98..646 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:47:52 Download gff for
BS06133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps29-RA | 98..646 | 17..565 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:47:52 Download gff for
BS06133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1150857..1151411 | 11..565 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 06:40:20 Download gff for
BS06133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1150857..1151411 | 11..565 | 99 | | Plus |
BS06133.complete Sequence
581 bp (581 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ635366
> BS06133.complete
GAAGTTATCAGTCGACATGCTCGTTCTGGTACTCGGCGACCTGCACATCC
CGCACCGGTGCAGCAGCCTGCCGGCTAAATTTAAGAAGCTGCTGGTGCCG
GGCCGCATACATCACATCCTGGCCACCGGAAACATCTGCACCAAGGAGTC
CTACGACTACCTGAAGTCCCTGGCCAATGATGTGCACATAGTGCGCGGCG
ACTTCGACGAGAACCTGACGTATCCGGAGCAGAAGGTGGTCACGGTAGGC
CAGTTCCGGATCGGTCTGTGCCACGGCCACCAGGTGGTTCCCCGCGGAGA
CCCGGAGGCGCTGGCCCTCATCCAGCGGCAACTGGACGTGGACATCCTGA
TCACGGGGCACACGTACAAGTTCGAGGCCTACGAGCACGGCAACAAATTC
TACATCAATCCGGGATCGGCCACGGGTGCCTTCAACCCACTGGACACCAA
TGTGGTGCCTTCGTTCGTGCTGATGGACATTCAGAGCACCACGGTGGTCA
CGTACGTGTACCAACTGATCGGCGACGAGGTCAAAGTGGAGCGCATCGAG
TACAAGAAGATCTAGAAGCTTTCTAGACCAT
BS06133.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:40:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps29-RA | 549 | CG4764-PA | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:40:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps29-RA | 999 | CG4764-RA | 98..646 | 17..565 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:40:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1150863..1151411 | 17..565 | 2745 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:40:02 has no hits.
BS06133.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:18:10 Download gff for
BS06133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 1..549 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:59:03 Download gff for
BS06133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 81..629 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:01:51 Download gff for
BS06133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 98..646 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:18:10 Download gff for
BS06133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 81..629 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:05:55 Download gff for
BS06133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps29-RA | 98..646 | 17..565 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:05:55 Download gff for
BS06133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1150863..1151411 | 17..565 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:01:51 Download gff for
BS06133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1150863..1151411 | 17..565 | 100 | | Plus |
BS06133.pep Sequence
Translation from 16 to 564
> BS06133.pep
MLVLVLGDLHIPHRCSSLPAKFKKLLVPGRIHHILATGNICTKESYDYLK
SLANDVHIVRGDFDENLTYPEQKVVTVGQFRIGLCHGHQVVPRGDPEALA
LIQRQLDVDILITGHTYKFEAYEHGNKFYINPGSATGAFNPLDTNVVPSF
VLMDIQSTTVVTYVYQLIGDEVKVERIEYKKI*
BS06133.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:01:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps29-PA | 182 | CG4764-PA | 1..182 | 1..182 | 956 | 100 | Plus |
